Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01493 ATGAAATTACTGGGTAGGGAGAATCCCGTGAAGAAGGAGAGGGAGACTCGCTCAAAGCTGTTAAAAAAGTTCATGGCAGATCTGAAAAGCGATGACAGCGCGCATGGAGAGCAATTCAAGTTCGAAGAACGGCCAAACTCGCCGGAATCTCTTGCAACGAGGGATTTCTCTGCAAGTTGCCTTTCGTCGAGAACTGGAGACTGGGAGTCAAAATATGAAGATATTCAAGTTGATGAAGTTGAATCCACTCTGAAAGAAGCCCTCTCCTTGAACTACGAGGAAGCGAGGGCTTTGTTGGGGAGACTTGAATATCAGAGAGAGAATTTTGATGCTGCCCTTCAGGTTTTTCAGGGTATTGATGTTAAAGTTTTAGCCCCAAGAATGACTAAAGCCATTGCCGAGAGAATGAAGCTGCGAAAACCTCGATCGAAAAGCGATTCTGTTCCTTCTGGTTTGATGTCCATTCATTCTGTCAGCCTCCTGCTCGAAGCAATATTACTCAAGGCAAAATCACTCCAGGAACTTGGGAGATTCAAAGAGGCTGCAAAGGAATGCAAAACAATTCTTGATATAGTAGACTCTGCTTTGCCAATTGGAATGCCTGGGTTGATTGAAGAAGACAGCAAATTGCAGGAAATGCTTCACAAGGCGTTAGAGTTGCTACCAAAATTATGGACAAGTGCAGGATTTCTCGACGAGGCTATTATTGCTTATCGGCGAGCTCTCATTAAGCCGTGGAATCTTGAGCTTGAGAGGTTAGCCAACGTACAAAAAGAATTGGCTGCTATGTTGCTCTATGGCGGAGTTGAGTCGAGCTTGTCCCTCCCTCTACACATATGGGGTCCAATCTCTTCTACTGCCCCTAAAAATAACACAGAAGAAGCAATAGTTTTACTCTTAATACTCGTGAGGAAAGCAGCAATAGGAGAAATCAAATGGGATCGAGAGATTATGGACCATCTGACCTATGCCCTTTCAATAACTGGACAGTTTGAAATGCTGGCTGAGCACGTGGAGCAGATCCTTCCGGGTATATATGGTAGAGCTGAGAGATGGCTTTTTCTTGCCCTTTGTTATAGTGCTGCAAAACAGCAGGAGACTGCCATAAATCTTTTGAAGAAAATCTGCGGTTGTTCCGAGGGAAATCAAAAACCCCATTTTCCAGCTTTATTGTTGGGAGCGAAATTGTGTTCCGAGAATGCGAAACATGCCCGTGAAGGCATTTTTTTTGCTCGTAAATTGATTGACTCGATCAATCATCAAAACCAGCATTCTCTCTGTCAAGCTCGTAAATTTCTTGGTATTTGCTATGGCAGTGCAGCTAGAATTTCCATATCGGATTCCGAACGAGTTCTTTTTCAGAAAGAGGCTTTGAAAATCTTGACTTTAGCTGTAAATGGCTGTAATGATCCTGAACTAATGTTTCACCTTGGTCTGGAACATTCAATGCAGAGGAATCTGGATCTTGCCTTTAATAATTTGATGATGTATGTAGAAATGGTTGGTGGAAGTGGAAAGGGATTGAAGCTGTTGGCACTTATAATTTCTGCTCAACAGCGGCTCGAGAATGCCGAAACCATTGTCGACTTTGCTCTGGATGAGACTGAGACGAAGGATCATTTAGAACTTCTTCGATTAAAAGGCGCTCTTCAAATTGCACGGAAACAGCCCAAGCAAGCTATAGAAACCTATAGAATCATGCTAGCTCATATTCAAGCACAAAGGGAGATTCAGCTTCAATCTGAGAACTTTGAGCAAGCAAAAAACGCCCATTCCGAGGCATCGGAAGAGAGAAATTTTGAAGTGGCAGCATGGCAAGATTTAGCCACCGTTTATTTGGAACTTGGTTCGCAGGCAGATGCCGAAATTTGTCTTGACAAAGCCAAGGCGATTGAGTATCATTCGCCGATAACTTGGCATAAAACAGGTACTTTGTTGGAAGCAAAATCGATGTATAGAGAAGCTCTTGTGTCATTCTCACTTTCTTTATCGGTGGATCCTGATTATGTCCCGAGCATTGTTTCTACTGCTCAAGTGTTGATGAAATTAGGCGACCAATCTCTTCCGATTGCACGAAGTTTATTAATGAATGCTATAAGATTAGAGCCCTCTAACCACGATGCATGGTTCAGTCTGGGACTCATATCGAGAAAGGAAGGGTTGCTTCAACAAGCTGGCGACTTTTTTCAAGCCGCACACGAGCTCAAGTCCTCAGCCCCTGTCCGAAGCTTTATCTAA 2238 43.39 MKLLGRENPVKKERETRSKLLKKFMADLKSDDSAHGEQFKFEERPNSPESLATRDFSASCLSSRTGDWESKYEDIQVDEVESTLKEALSLNYEEARALLGRLEYQRENFDAALQVFQGIDVKVLAPRMTKAIAERMKLRKPRSKSDSVPSGLMSIHSVSLLLEAILLKAKSLQELGRFKEAAKECKTILDIVDSALPIGMPGLIEEDSKLQEMLHKALELLPKLWTSAGFLDEAIIAYRRALIKPWNLELERLANVQKELAAMLLYGGVESSLSLPLHIWGPISSTAPKNNTEEAIVLLLILVRKAAIGEIKWDREIMDHLTYALSITGQFEMLAEHVEQILPGIYGRAERWLFLALCYSAAKQQETAINLLKKICGCSEGNQKPHFPALLLGAKLCSENAKHAREGIFFARKLIDSINHQNQHSLCQARKFLGICYGSAARISISDSERVLFQKEALKILTLAVNGCNDPELMFHLGLEHSMQRNLDLAFNNLMMYVEMVGGSGKGLKLLALIISAQQRLENAETIVDFALDETETKDHLELLRLKGALQIARKQPKQAIETYRIMLAHIQAQREIQLQSENFEQAKNAHSEASEERNFEVAAWQDLATVYLELGSQADAEICLDKAKAIEYHSPITWHKTGTLLEAKSMYREALVSFSLSLSVDPDYVPSIVSTAQVLMKLGDQSLPIARSLLMNAIRLEPSNHDAWFSLGLISRKEGLLQQAGDFFQAAHELKSSAPVRSFI 745
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 54434194 54438246 - BLOR01493 Blo01g01493 55933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01493 745 Coils Coil 85 105 - -
Blo01g01493 745 PANTHER PROTEIN NPGR1 35 744 - -
Blo01g01493 745 SUPERFAMILY TPR-like 347 634 IPR011990 GO:0005515
Blo01g01493 745 SMART tpr_5 602 635 IPR019734 GO:0005515
Blo01g01493 745 SMART tpr_5 541 574 IPR019734 GO:0005515
Blo01g01493 745 SMART tpr_5 162 195 IPR019734 GO:0005515
Blo01g01493 745 SMART tpr_5 636 669 IPR019734 GO:0005515
Blo01g01493 745 SMART tpr_5 706 739 IPR019734 GO:0005515
Blo01g01493 745 SMART tpr_5 349 382 IPR019734 GO:0005515
Blo01g01493 745 Gene3D Tetratricopeptide repeat domain 287 572 IPR011990 GO:0005515
Blo01g01493 745 Gene3D Tetratricopeptide repeat domain 42 274 IPR011990 GO:0005515
Blo01g01493 745 Gene3D Tetratricopeptide repeat domain 573 742 IPR011990 GO:0005515
Blo01g01493 745 ProSiteProfiles TPR repeat profile. 636 669 IPR019734 GO:0005515
Blo01g01493 745 MobiDBLite consensus disorder prediction 29 52 - -
Blo01g01493 745 PANTHER PROTEIN NPG1 35 744 IPR043376 -
Blo01g01493 745 Coils Coil 514 534 - -
Blo01g01493 745 SUPERFAMILY TPR-like 94 382 IPR011990 GO:0005515
Blo01g01493 745 MobiDBLite consensus disorder prediction 29 49 - -
Blo01g01493 745 SUPERFAMILY TPR-like 578 738 IPR011990 GO:0005515
Blo01g01493 745 Pfam Tetratricopeptide repeat 688 736 - -
Blo01g01493 745 Coils Coil 570 597 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01493 Blo-Chr1:54434194 Blo19g00094 Blo-Chr19:2436350 1.18E-175 dispersed
Blo01g01493 Blo-Chr1:54434194 Blo07g00276 Blo-Chr7:3252829 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01493 K21843 - qsu:112035093 959.133