Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01498 ATGGAGTTTCTTAGAGCTTTTTGTGAAGGAGAGTGTCACTCATCATGTTCGTTAAGTTCTTTTGAAGATTGGGTGGATTTTGTACCAGATTTTCTTGTTCAACATCCTTATTTTCTGAAGCAAGAAGAACTGAGCTTCCCACCATTCACTGTCGGCAACAGTCATCAAGCCACTGTGGGTGTTACAGGGATTGATGATTACTGGTTGCATTCTTTAGATACTTTCAACACTGACTTCGACTGGAACAAACCAGAAAGTAGTCTTTGTAGTAATCGTAATAATAGTGCTTTAATTTCTGGTTCATTGCATGAAGAAGACTACCTTAATGGTTGTAATCAGGTTCCTACAGAAAACAATTTGTCGGTGAGTACAGGTGATGGAATAGTGGGTGAAGGCTCCTTCTTCCCAGAATGGACTGAAGTTATGCCGGATGCTACTGCTTGTGTTGATGAGGATGTGGGCTTCAAGAGACTTGAAAATTATGATGAATCTAACGAGGGATTACCCCTTAAAAGGAAATTTCACGGTGTAGAAGTTGAAAAAAGAGTTGATCATAAAGACAGTACCAACTCATGTGACAACCTGAAGAAAAGAACTAAGATTTCACGGGATGGCCAGAATGATAGCAATACAGTAAAATCAAAGAAAGGCAAGAAGCACGCCCCAAAAGGGAAATCTGAAGAAGAGGGCAAAGCTGTATCTGATGGACAGAGCTGCAGCAGCTCCAGCTCAGAAGAAGAGATTGCTTCTCATGAAAATAACGGAGAACCAACTTCAGAGTCTATGACTAGTGCAGTTTGTGGAAAGACGAGGGCAAGTAGAGGGTCAGCCACTGATCCCCAGAGTGTTTATGCAAAGAAAAGAAGAGAAAAAATTAACGAGCGGCTGAGAATCTTACAAACTCTTGTACCCAATGGAACGAAGGTTGACATTAGCACTATGCTCGAGGAAGCAGTCCAGTATGTGAAGTTTTTGCAACTCCAAATTCAGCTTTTAAGCTCAGATGACTTATGGATGTACGCTCCATTAGCTTATAATGGATTTGACATTGGCCTGCACCAAAAGATGTCTCAATTTCAACGACAGTAA 1089 41.05 MEFLRAFCEGECHSSCSLSSFEDWVDFVPDFLVQHPYFLKQEELSFPPFTVGNSHQATVGVTGIDDYWLHSLDTFNTDFDWNKPESSLCSNRNNSALISGSLHEEDYLNGCNQVPTENNLSVSTGDGIVGEGSFFPEWTEVMPDATACVDEDVGFKRLENYDESNEGLPLKRKFHGVEVEKRVDHKDSTNSCDNLKKRTKISRDGQNDSNTVKSKKGKKHAPKGKSEEEGKAVSDGQSCSSSSSEEEIASHENNGEPTSESMTSAVCGKTRASRGSATDPQSVYAKKRREKINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIQLLSSDDLWMYAPLAYNGFDIGLHQKMSQFQRQ 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 54505556 54507041 - BLOR01498 Blo01g01498 55938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01498 362 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 276 340 IPR036638 GO:0046983
Blo01g01498 362 Pfam Helix-loop-helix DNA-binding domain 286 326 IPR011598 GO:0046983
Blo01g01498 362 MobiDBLite consensus disorder prediction 233 280 - -
Blo01g01498 362 Gene3D - 279 339 IPR036638 GO:0046983
Blo01g01498 362 MobiDBLite consensus disorder prediction 183 232 - -
Blo01g01498 362 PANTHER TRANSCRIPTION FACTOR BHLH139-LIKE 7 358 - -
Blo01g01498 362 SMART finulus 282 331 IPR011598 GO:0046983
Blo01g01498 362 MobiDBLite consensus disorder prediction 183 286 - -
Blo01g01498 362 CDD bHLH_AtIND_like 277 339 - -
Blo01g01498 362 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 7 358 - -
Blo01g01498 362 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 276 325 IPR011598 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g01498 Blo17g00860 CCT
Blo01g01498 Blo18g00720 CCT
Blo01g01498 Blo17g00860 ECH
Blo01g01498 Blo18g00720 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01498 Blo-Chr1:54505556 Blo17g00860 Blo-Chr17:28076507 8.99E-70 dispersed
Blo01g01498 Blo-Chr1:54505556 Blo12g00983 Blo-Chr12:27861437 6.53E-23 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11927 PF00010 HLH 1.10E-08 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01498 - - qsu:112027126 273.092