Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01509 ATGTCTTTGTTCTTATATTTCTTGTTCTTTTTAGCTTTTCATGGCGTCTTCAATCACCTGCTGAGGAGAGCACGGCACTACCCGCCGACCCTTTTCCCTTCTTTTCCCTTCATTGGCCATCTCTACCTCCTCAGGAAACCTCTTCACAGAACCCTCTCCGCTATATCATCCCGATACGGTCCGATACTCTATCTCCATTTCGGCTTTCGTCCTGTCCTCCTTGTTTCGTCTCCTTCTGCAGCAGAGGAATGTCTCAGTAACAACGACGTCGTTTTTGCAAACCGCCCTCGCCTCCTCGCTGGGAAATACATGGGTTATAACTACACTAGCCTCGCTTGGGCTCCTTACGGAGACCATTGGAGGAATCTCAGACGAATCTCTTCCCTCCAACTTCTGTCCTCTGCCAATCTCCAGACTCTTTCTCATATACGAGATGATGAGGTCCGTTCCTTAATCCGCTGGCTGTCGCAAAACCCAAACCAAGTGGTGGATATGAGATCAGCGCTGTTTGGATTACTACTTAATATCATGACTCGAATGATTGGAGGAAATCGATGCTGCGGAGGTGAAGTGGTGGACATGGAAAAAGCTGCAAGGTTCAAAGCTATTATTGAAGAATCATTGAAAGTACAGTCCGTGTCGAATGTAGCAGATTTTCTGCCATATTTGGGGTGGTTTGCAAGCAGACGGATGGAGAAGAGATTGCAGGCGCTGCAGAAGAAGAGAGATAGCTTCATGCAAAGCTTGATAGAAGAGCGTAGGAGATTGAGATCTTCGTCGGAAGATAAGAAGAACACCATGATTGACATTTTGCTGTCTCTGCAAGAATCTGAGCCGGAATACTACGCTGACCATGTTATTATCGGCCTCATGATTGTTCTGCTATCAGCAGGAACAGATACCTCAGTCGGAACCCTAGAGTGGGCAATGTCGTTTTTACTTAACAACCCAGAAGTTATGAAGAAAACAATGGCGGAAATAGACGATCGAGTGGGCCAAGAGCGCCTGATCAATGAATCAGATATAGCCAACCTTCCTTACTTGCATTGCGTGATAAAGGAGACTCTGCGAATCAGCCCACCTGCTCCGCTACTGCCGCACGAGTCATCCGCCGACTGCATCGTGGGTGGCTTCAAGGTTCCACGCGGCACGCTTTTGATGGTAAATGTATGGGCCATGCAAAATGATCCAAGGAATTGGGAGGACCCCACTAGATTTGACCCGGATAGGTTCGTCGGATCAGAGGGGCTGAGAGATGGGTTCAAGTTTATGCCATTTGGGTCGGGTAGAAGGGCTTGTCCAGGAGAAGGATTAGCCATGCGAGCGGTTGGGTTGGCCTTGGGCTCCCTCGTTCAGTGCTTTGAATGGGAGAGAGAGAGCAAGGAAATGGTGGATTTGAGGGAGGGAGATGGGCTAACCATGCCTAAGGCCATTCCTCTCAAAGCTAAGTGCCACCCTCGCCCAATTATGCTTAAACTTCTCTCTTAA 1488 48.45 MSLFLYFLFFLAFHGVFNHLLRRARHYPPTLFPSFPFIGHLYLLRKPLHRTLSAISSRYGPILYLHFGFRPVLLVSSPSAAEECLSNNDVVFANRPRLLAGKYMGYNYTSLAWAPYGDHWRNLRRISSLQLLSSANLQTLSHIRDDEVRSLIRWLSQNPNQVVDMRSALFGLLLNIMTRMIGGNRCCGGEVVDMEKAARFKAIIEESLKVQSVSNVADFLPYLGWFASRRMEKRLQALQKKRDSFMQSLIEERRRLRSSSEDKKNTMIDILLSLQESEPEYYADHVIIGLMIVLLSAGTDTSVGTLEWAMSFLLNNPEVMKKTMAEIDDRVGQERLINESDIANLPYLHCVIKETLRISPPAPLLPHESSADCIVGGFKVPRGTLLMVNVWAMQNDPRNWEDPTRFDPDRFVGSEGLRDGFKFMPFGSGRRACPGEGLAMRAVGLALGSLVQCFEWERESKEMVDLREGDGLTMPKAIPLKAKCHPRPIMLKLLS 495
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 54642834 54644387 - BLOR01509 Blo01g01509 55949

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01509 495 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo01g01509 495 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo01g01509 495 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo01g01509 495 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo01g01509 495 PRINTS E-class P450 group I signature 80 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo01g01509 495 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo01g01509 495 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo01g01509 495 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo01g01509 495 Coils Coil 228 248 - -
Blo01g01509 495 PANTHER CYTOCHROME P450 82C3-RELATED 15 494 - -
Blo01g01509 495 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Blo01g01509 495 Pfam Cytochrome P450 29 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo01g01509 495 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo01g01509 495 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo01g01509 495 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo01g01509 495 PRINTS P450 superfamily signature 433 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo01g01509 495 SUPERFAMILY Cytochrome P450 28 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo01g01509 495 PANTHER CYTOCHROME P450 81E8 15 494 - -
Blo01g01509 495 Gene3D Cytochrome P450 21 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01509 - - - vvi:100267741 622.083
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01509 Blo-Chr1:54642834 Blo05g00713 Blo-Chr5:24843312 1.19E-169 dispersed
Blo01g01506 Blo-Chr1:54631776 Blo01g01509 Blo-Chr1:54642834 5.59E-151 proximal
Blo01g01507 Blo-Chr1:54633007 Blo01g01509 Blo-Chr1:54642834 2.40E-40 proximal
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g698 Blo01g01509 . . . . . . . . . Cma01g01805 Cma09g00267 . . . . . . . . . . . . . . . . . . . . . . . Lsi04g01511 Csa04g02453 . . . . . . . . . . . Cmo01g01862 . . . . . . Cpe02g00204 . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000014 8 19 13 8 6 18 15 17 16 19 16 18 14 17 19 19 18 9 12 19 19 25 15 12 12 20 11 24 18 21 477
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo01g01509 Blo_Chr01 FPKM 2.161791 5.15375 3.882561 4.226753 0.0 0.0 1.641431 7.706291 5.982972 7.355367