Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01517 ATGGCTCGGTATCATTCCAACTCTGCAATTCTTATGGAATCTCTGTATTGCTCAGAAGAGCATTGGGAGGACGAGGAAGAAACAATGGAGAACTATTTTGAGAATGAAGTAGGGGGACGCTATTACTATGATCTGAATACTATGCAGAAACCGAGAATCTTCTTAGAGCAAGACCTTGTCTGGGAAGAAGACGAGCTAATCTCTCTACTCTCAAAAGAGCAGACTAATAAACTCCATAAACAACTACTCGTCGACCCGTCTCTCGACGAAGCTCGGAGGAACGCCGTCGAATGGATGCTCACAGTCAGCAACCACTATTGTTTTTCTCCTCTCACCGCCGTTCTCTCCGTTGACTATCTCGACAAGTTTCTCTGCAGTTTCCACTTTCAGAGAGAAAAGCCATGGATGACCCAGCTCGCAGCAGTGGCTTGTATCTCTTTAGCGGCGAAAATGGAGGAGACCCACGTTCCGCTTCTTCTGGATCTGCAGGTGAAAGAGAGTAGGTACTTATTTGAAGCCAAAACTATAAAGAGAATGGAGATTCTGGTGCTCTCGACTCTTCAATGGCGGATGAATCCTGTAACTCCACTTTCATTTTTAGATTACATAACGCGAAGGCTTGGGTTAAGGGATCGTCTCTGCGTTGAATTTCTCAGACGGTCTGGGCAAATTCTTCTCTCCATGATTACTGATTTTAGGTTCATGTCGTTTCTTCCATCTGTCATTGCCCATGCCATTGTGCTCCACCTTGTTTGTAACATAGAGCCAAGTCTTGCGATTGAATACCAAAATCAACTGTTTAGTATTCTCAATATCGACAAGGCCAAGGTAGACGACTGTTACAGGCTTATTTTGGAAGAAGAAACAAGCGGAAGCAGCCATGACCACCATCGGCTGAAGCGCAAGTTCGGTTCTTTACCAAGCAGCCCAAATGGCGTGATGGAACTCCATTTCAGCCCGGATAGTTCGAACGAGTCGTGGGGAGTGGCAACATTATCAGATCCACCCACTCCCGTTAGAGAATTGGAAACTGATCCACTGTTCAATTCGGGACGTGGATCTGCACTGTCGGAGAAAGGAATGGTGGAAATGGAAGCAAGCATAATGGATGGGCCTAAACGGAGATGCGGCGCCGTTTCCGGCCTGACCACTGTTAAAAACCCAGTCTCCCTCGCTCGTCTTGTCATGGACAAGTCGCCCCATTCCTATATCGCCTTCTCCGGTGCCGAGGAATTCGCTCGGAAGCAGGGTGTTGAACTAGTTGACAACAGCTATTTCATAACGGAGGAGAACGTCAGAGTTCTCAAATTGGCAAAAAAAGCAAATGCCATTTTGTTTGACTACAGAATCCCGGCTCTCGGAGTTGAAACATGCAGCGCCAGCGTAGAGAGTCCCTTGCTGATGAACGGGCTACCGATAAGCGTATACGCACCAGAGACGGTGGGGTGCGTGGTAGTGGACAGCCAAGGCCGTTGCGCGGCGGCCACCTCAACCGGTGGGTTAATGAACAAATTGAGCGGACGAATAGGCGACTCGCCTCTGATCGGCGCTGGAACCTACGCGTGCAATCTCTGCGGGGTGTCATGCACTGGAGAAGGCGAGGCGATCATACGAGGGACGTTGGCTCGAGAAGTGGCTGCCGTGATGGAGTACAAAGGGCTTGGTCTACAAGAGGCTGTAAACTATGTCGTAAAGGAGAGGCTCGACGAAGGGAAGGCTGGGCTGATTGCTGTGTCCAAAAATGGCGAAGTGGCTTATGGGTTTAACACTTGTGGTATGTTCAGAGGTTGTGCTACTGAAGATGGATTCATGGAGGTCGGCATTTGGGAGTAG 1833 48.94 MARYHSNSAILMESLYCSEEHWEDEEETMENYFENEVGGRYYYDLNTMQKPRIFLEQDLVWEEDELISLLSKEQTNKLHKQLLVDPSLDEARRNAVEWMLTVSNHYCFSPLTAVLSVDYLDKFLCSFHFQREKPWMTQLAAVACISLAAKMEETHVPLLLDLQVKESRYLFEAKTIKRMEILVLSTLQWRMNPVTPLSFLDYITRRLGLRDRLCVEFLRRSGQILLSMITDFRFMSFLPSVIAHAIVLHLVCNIEPSLAIEYQNQLFSILNIDKAKVDDCYRLILEEETSGSSHDHHRLKRKFGSLPSSPNGVMELHFSPDSSNESWGVATLSDPPTPVRELETDPLFNSGRGSALSEKGMVEMEASIMDGPKRRCGAVSGLTTVKNPVSLARLVMDKSPHSYIAFSGAEEFARKQGVELVDNSYFITEENVRVLKLAKKANAILFDYRIPALGVETCSASVESPLLMNGLPISVYAPETVGCVVVDSQGRCAAATSTGGLMNKLSGRIGDSPLIGAGTYACNLCGVSCTGEGEAIIRGTLAREVAAVMEYKGLGLQEAVNYVVKERLDEGKAGLIAVSKNGEVAYGFNTCGMFRGCATEDGFMEVGIWE 610
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 54732096 54738021 - BLOR01517 Blo01g01517 55957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01517 610 ProSitePatterns Cyclins signature. 92 123 IPR006671 -
Blo01g01517 610 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 339 608 IPR029055 -
Blo01g01517 610 CDD CYCLIN 92 184 IPR013763 -
Blo01g01517 610 PANTHER L-ASPARAGINASE 339 610 IPR000246 GO:0016787
Blo01g01517 610 Gene3D (Glycosyl)asparaginase 480 610 - -
Blo01g01517 610 SUPERFAMILY Cyclin-like 195 305 IPR036915 -
Blo01g01517 610 Pfam Cyclin, C-terminal domain 194 305 IPR004367 -
Blo01g01517 610 SUPERFAMILY Cyclin-like 60 192 IPR036915 -
Blo01g01517 610 Pfam Cyclin, N-terminal domain 71 192 IPR006671 -
Blo01g01517 610 Gene3D - 88 192 - -
Blo01g01517 610 Gene3D - 193 282 - -
Blo01g01517 610 PANTHER PEPTIDASE T2, ASPARAGINASE 2, NUCLEOPHILE AMINOHYDROLASE-RELATED 339 610 - -
Blo01g01517 610 SMART cyclin_7 97 185 IPR013763 -
Blo01g01517 610 CDD Asparaginase_2 339 602 - -
Blo01g01517 610 SMART Cyclin_C_2 194 320 IPR004367 -
Blo01g01517 610 Pfam Asparaginase 339 609 IPR000246 GO:0016787
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g01517 Blo17g00869 CCT
Blo01g01517 Blo18g00706 CCT
Blo01g01517 Blo17g00869 ECH
Blo01g01517 Blo18g00706 ECH
Blo01g01517 Blo12g00970 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01517 Blo-Chr1:54732096 Blo18g00706 Blo-Chr18:16177412 9.09E-115 dispersed
Blo01g00032 Blo-Chr1:417587 Blo01g01517 Blo-Chr1:54732096 4.92E-52 transposed
Blo01g00852 Blo-Chr1:15423675 Blo01g01517 Blo-Chr1:54732096 8.34E-43 transposed
Blo06g01204 Blo-Chr6:35586362 Blo01g01517 Blo-Chr1:54732096 8.80E-103 transposed
Blo07g00177 Blo-Chr7:2226888 Blo01g01517 Blo-Chr1:54732096 1.77E-35 transposed
Blo12g00971 Blo-Chr12:27793220 Blo01g01517 Blo-Chr1:54732096 0 transposed
Blo15g00123 Blo-Chr15:996211 Blo01g01517 Blo-Chr1:54732096 3.88E-14 transposed
Blo16g00600 Blo-Chr16:24459858 Blo01g01517 Blo-Chr1:54732096 1.30E-18 transposed
Blo01g01517 Blo-Chr1:54732096 Blo12g00970 Blo-Chr12:27787416 1.90E-167 wgd
Blo01g01517 Blo-Chr1:54732096 Blo17g00869 Blo-Chr17:28497262 4.55E-115 wgd
Blo01g01517 Blo-Chr1:54732096 Blo04g01071 Blo-Chr4:15393536 3.21E-88 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01517 K13051 - zju:107420012 488.419