Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01527 ATGGACGTCTCTCGCTCAATCCAACGGCTAAGGATATCTCGTTTGTCTTTGCCTTTGGCAGAGACGCCATATTCAATCCTGGCCGTCGATCCAGACGAGGGACGTCCCTCGCTTGATCCAACGGCCAGCGAATGTCGTCTGTCCGTCGCCTCTAGACGATTCCAGCTTCGTCTCTGCCATCGTCTGCCATCGTTCATCTTCTTCGAACCGCAGAGAAGGACAAAGCTTGACGTTCTTCGACTCCTTTCGATGCCGCTTGATAGAGTACAAACGGGGGCGTTAACCTCGACGATCCTAGACGGAAATCGTGACTGCGAGAAGTTGAATTTGTCTGATAACGACTTTGAAAACATTCCCTCTACAACCAGCGGCATGTGTTTCTATTGTAGCATTATAGTAGAGGACGTTGAACTTACAGAACAATTGAATGCTCTGGGACTTCCTCTTGCTTTTCACACAAACAAGGAGAAGAAGAGCGGAAAGAACAATGGCAAAAATTACGCATCCTCCAAGCAATCTTTTTGGAGCAAACAATATTTTCAGGAAGAAGCTCTTGAATTCTCCGAAGTGAGTGTTGGGGAGAATACATGTTTTTTATTTGATGATGATGCAAACAGTTCTTCAAATTGCACTATCATATTGGGCCAAAGTGAATCCTCTGGTTCTCACGTTGCAGTGGATGGCAATGGAGTCCAATTTTCATCTGTTGATAGACTAAATTCAATATGCTCAATTATGTTGTCTACAAGTGCTGTCAAAGGGTTAATCAGTGATGGAATTATTGATGCTATCGCTGCTAATGAGGACCCTCGTGATTCTAGCTTTGGCAATACTATGTCAAAGGGTGATGTAGAAGCTGTGTTGAAATCAATGAGTTTGGAGACTAGGCTCTCTGCAGGAAGATTTACAGATCTTGGCTGTAACGAGCAAGAGACACTTGAAAAACCTATGGAGCATGAATGTTCAGAACAATTGTCAATGCCTCTCTATAATGTTGAGTTTGATAATGGGTGGAATAGTAATACCACTTCCGAGGTGTTGGTTCCTGAGTCAGTTGCAATGCATTTGGAGGCCAGTGATCTTAATGAAAATGGGGGGTTTAAATGTGGGGAATATTCGGGAGATTGGATGATGTGTTGGGATACTCTTTATATGCAAAACTACTACTTCAATATAAAAACACATGAGTCCACTTGGTACCCTCCCCCAGGCTTCGAACAATATGCTGTTTGTGAGTCTGGCTGTGAGTCAAATGAAACACATGCTGGGCTGATTGATTTAAATGTCAGCCCTTCTGTAATGTCTATTGATATGTGTTCTCGGTTCAATGAATCCAAGTCCAATGAAAAGCCAATGGATGACAATGAACTAATTCATCAGTCACCTGATGGCTTTTGCATTAAAACCAGCAGTAGTAATTCTGTCTCTGACAGTAATGTAAATACGTCAACTACGGGTCATGAGCATTTGGAACCCTCGGATGATAAAGAACTTGTTATGTCCCCATTTTCTGCTTTATGCATCATGAGTAATCTGAATCTAATAGTGCTAACTTGTTGTAATTTTAGTTGCAACAGTGCAATGAAGAGACCTGGTATAAATGAGGTTTGCACTGCTGATTCTCAGCTGACATGTACAGATAGACGTGACCATGACCGTACAGACAACCTTATTGATGAACTGCACAGTAGTATCTTACACAAGGAAGATTGTGTCTGCAATGATGATGATGAGGCTTTCCCAAAGATAGATAGTAGCAGACTTGTTCAATGTCACAAAAATGCAGTCGCTGAGCATAGCATGCATACTGGAAATGGAGTAACTTCAAAAGATGGGTTAGAGAGCCAAAATGATCCGGCTGTTAAAAGGAGAAAAAAGCAAGTGAGAAGAACACGAGGACGAGAGGAATTTATTGGAAATGAAGCGGTTCAACTTCAAGAGATGGTAGAAGAGAATTCTGCCAGTATTTATAAATACTGGTGTCAGAGGTATGTACTATTCTCTAAGTTTGATGATGGTATCAAAATGGATGAGGAAGGATGGTTTTCCGTTACTCCAGAATCTATCGCTAGACATCACGCATCTCGTTGTGGCGGTGGCTTGATAATTGACGGTTTCACCGGAGTTGGTGGGAATGCCATCCAATTTGCCCAGACGAGCATGCATGTAACTGCAATTGATATTGACCCACAGAAGATTCAATATGCTCGTAACAACGCTGCTGTCTATGGTGTTGAGGATCAAATAGATTTTGTGACGGGTGACCTTTTTGTTTTGGCCCCAAGCTTGAAGGCAGACACAATTTTCTTATCACCTCCATGGGGCGGTCCTGATTATGCTAAAGTAAAGACATATGACATCAATACAATGCTAAGGCCACGGGACGGGTATTCTCTCTTCAAAGCTGCAAAGAAGATAGCCCCCAAAATTGTAATGTTTCTTCCGCGCAATGTAAATCTCAATCAATTGGCTGCGTTGTCCCTATCCTCCCCTACCCCATGGTCACTTGAGGTAGAGAAGAATTATTTAAACGGGAAGCTGAAGGCTATAACTGCATACTTTACTGACAATCTTGCTTCCGAGGGCAAGAAACAGCCAACAAAGTTCACAAGAGTTGACATATCTGAAGAAGCGTATGTTTAA 2643 42.38 MDVSRSIQRLRISRLSLPLAETPYSILAVDPDEGRPSLDPTASECRLSVASRRFQLRLCHRLPSFIFFEPQRRTKLDVLRLLSMPLDRVQTGALTSTILDGNRDCEKLNLSDNDFENIPSTTSGMCFYCSIIVEDVELTEQLNALGLPLAFHTNKEKKSGKNNGKNYASSKQSFWSKQYFQEEALEFSEVSVGENTCFLFDDDANSSSNCTIILGQSESSGSHVAVDGNGVQFSSVDRLNSICSIMLSTSAVKGLISDGIIDAIAANEDPRDSSFGNTMSKGDVEAVLKSMSLETRLSAGRFTDLGCNEQETLEKPMEHECSEQLSMPLYNVEFDNGWNSNTTSEVLVPESVAMHLEASDLNENGGFKCGEYSGDWMMCWDTLYMQNYYFNIKTHESTWYPPPGFEQYAVCESGCESNETHAGLIDLNVSPSVMSIDMCSRFNESKSNEKPMDDNELIHQSPDGFCIKTSSSNSVSDSNVNTSTTGHEHLEPSDDKELVMSPFSALCIMSNLNLIVLTCCNFSCNSAMKRPGINEVCTADSQLTCTDRRDHDRTDNLIDELHSSILHKEDCVCNDDDEAFPKIDSSRLVQCHKNAVAEHSMHTGNGVTSKDGLESQNDPAVKRRKKQVRRTRGREEFIGNEAVQLQEMVEENSASIYKYWCQRYVLFSKFDDGIKMDEEGWFSVTPESIARHHASRCGGGLIIDGFTGVGGNAIQFAQTSMHVTAIDIDPQKIQYARNNAAVYGVEDQIDFVTGDLFVLAPSLKADTIFLSPPWGGPDYAKVKTYDINTMLRPRDGYSLFKAAKKIAPKIVMFLPRNVNLNQLAALSLSSPTPWSLEVEKNYLNGKLKAITAYFTDNLASEGKKQPTKFTRVDISEEAYV 880
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 54854315 54861721 - BLOR01527 Blo01g01527 55967

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01527 880 Gene3D Vaccinia Virus protein VP39 647 863 IPR029063 -
Blo01g01527 880 PANTHER S-ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASE RELATED 612 861 - -
Blo01g01527 880 ProSiteProfiles WW/rsp5/WWP domain profile. 370 404 IPR001202 GO:0005515
Blo01g01527 880 MobiDBLite consensus disorder prediction 602 627 - -
Blo01g01527 880 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 647 819 IPR029063 -
Blo01g01527 880 MobiDBLite consensus disorder prediction 471 493 - -
Blo01g01527 880 Pfam RNA cap guanine-N2 methyltransferase 701 855 IPR019012 GO:0001510|GO:0008168|GO:0009452
Blo01g01527 880 CDD WW 374 404 IPR001202 GO:0005515
Blo01g01527 880 CDD AdoMet_MTases 702 782 - -
Blo01g01527 880 MobiDBLite consensus disorder prediction 471 487 - -
Blo01g01527 880 ProSitePatterns WW/rsp5/WWP domain signature. 376 402 IPR001202 GO:0005515
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01527 K14292 TGS1; trimethylguanosine synthase [EC:2.1.1.-] - jre:108979557 520.005
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01527 Blo-Chr1:54854315 Blo07g00092 Blo-Chr7:1325846 2.67E-47 dispersed
Blo01g01527 Blo-Chr1:54854315 Blo01g01764 Blo-Chr1:57379235 2.55E-25 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g757 Blo01g01527 . Bda01g00568 . Bpe02g00429 . . . . . . Cma09g00232 . . . Cpe06g00162 . . . . . . . . . . . . . . . . Cone7ag1371 . . Lsi04g01559 Csa04g02411 . . . . . . . . . . . . Cmo09g00224 . . . Car09g00201 . . Bhi09g03317 Tan01g4781 . . . . . Cla05g02043 Cam05g2193 Cec05g2211 Cco05g2256 Clacu05g2187 Cmu05g2053 Cre05g2182 . . Chy07g00135 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003746 1 4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 11 2 44
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo01g01527 Blo_Chr01 FPKM 7.337699 8.274922 7.304942 8.258637 10.701589 10.65115 11.976743 10.502989 10.771793 10.141245