Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01552 ATGAACGTCCACCCCGCACGGGATGGGATTAATGGGTTCTCCAGTCACCACGCCCCTTTGATTGTCAATCAAACGCACCAAAAGCTAGGGAAGAGTAGAGCGATTTCATGTACTCGCCCACACTTGAATATTTCCCAACATCGCAGTCCATCCTCGCTCAGAGAGAGATGGCAAGGGGTAATCCTCGTGAACGCATCTACCCTCTCTTTACAAAGCGAGGATCGGGCATACGGGTTCGGAGAATCACGGAGCAGCGGTGGCTGGGAAATGACGTCAGATGGGGCAACGTCTGCTACGACGAGTAGGAGGAAGCCGTCGTGGAGGGAGAGAGAGAATAACAGGAGGAGGGAGAGGAGGAGGAGAGCTATAGCGGCGAAGATATACATGGGGCTTAGAGCTCAAGGAAACTACAATTTGCCAAAGCACTGTGATAATAACGAGGTTCTCAAAGCACTCTGTATGGAAGCTGGATGGACTGTCGAAGAGGACGGTACAACCTATCGCAAGGGATACAAGACTCCCTCAACTGATATTGCAGGTACCTCCACCAAAATCACTCCTTACTCCTCTCAAAATCCCAGTCCCTTATCTTCATCATTTTCCAGTCCTTTATCTTCATCTTTTCCTAGTCCAATCCCTTCCTACCAAGTTAGTCCTTCCTCATCTTCCTTCCCCAGTCCCTCTCGATTTGATCCCAATAACCCGTCAAATCTCATTCCATGTCTTCGCCAAGTTATTCCCATGTCTCTTCCTCCTCTCCGAATCTCAAACAGTGCACCAGTGACTCCTCCTGTCTCCTCCCCAACTTCGAGAAATCCTAAGCCAATACCGTGTTGGGATGCCATTGCCAAAGAATCTATGACCTCCTTAAATTACCCTTTCTTTGCTGCTTCTGCACCTGCTAGTCCTACTCGCCAGCGGTTTTTTACACCAGCCACTATACCCGAATGTGATGAGTCTGATTCTTCGACCATTGATTCAGGCCAATGGGTGAGCTTTCAAGCATATGCAGCCTATGCAGCTGCAATGCCTACCTCTCCAACTTTTAACCTCATGAAACCTGTAGCTCAGCAAGTTCTTCCCAATCTTTCAATCCAAGAAAAGGGGAGAGTCAATGAGTTCGAATTTTCTGGCGAAAAGGTGAAGGCGTGGGAAGGGGAGAGAATTCACGAGGTGAGACTCGACGATTTAGAGCTCACACTCGGTAGAAGTAAGATTCAGAGACCACAGTAA 1233 48.58 MNVHPARDGINGFSSHHAPLIVNQTHQKLGKSRAISCTRPHLNISQHRSPSSLRERWQGVILVNASTLSLQSEDRAYGFGESRSSGGWEMTSDGATSATTSRRKPSWRERENNRRRERRRRAIAAKIYMGLRAQGNYNLPKHCDNNEVLKALCMEAGWTVEEDGTTYRKGYKTPSTDIAGTSTKITPYSSQNPSPLSSSFSSPLSSSFPSPIPSYQVSPSSSSFPSPSRFDPNNPSNLIPCLRQVIPMSLPPLRISNSAPVTPPVSSPTSRNPKPIPCWDAIAKESMTSLNYPFFAASAPASPTRQRFFTPATIPECDESDSSTIDSGQWVSFQAYAAYAAAMPTSPTFNLMKPVAQQVLPNLSIQEKGRVNEFEFSGEKVKAWEGERIHEVRLDDLELTLGRSKIQRPQ 410
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 55283183 55284874 + BLOR01552 Blo01g01552 55992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01552 410 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 90 406 IPR033264 GO:0003700|GO:0006351|GO:0009742
Blo01g01552 410 MobiDBLite consensus disorder prediction 166 203 - -
Blo01g01552 410 MobiDBLite consensus disorder prediction 169 203 - -
Blo01g01552 410 PANTHER PROTEIN BRASSINAZOLE-RESISTANT 1 90 406 - -
Blo01g01552 410 MobiDBLite consensus disorder prediction 81 118 - -
Blo01g01552 410 MobiDBLite consensus disorder prediction 103 118 - -
Blo01g01552 410 MobiDBLite consensus disorder prediction 85 102 - -
Blo01g01552 410 Pfam BES1/BZR1 plant transcription factor, N-terminal 101 232 IPR008540 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01552 Blo-Chr1:55283183 Blo06g00124 Blo-Chr6:4857397 1.33E-93 dispersed
Blo01g01552 Blo-Chr1:55283183 Blo11g00263 Blo-Chr11:2124865 5.46E-29 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11933 PF05687 BES1_N 8.90E-56 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01552 K14503 - tcc:18591343 370.163