Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01558 ATGGCTGCCCGCTCCGATTCCGATGCCCATCCCAAACTTTCTGTCACCACTCCTCATCAGATCTCCATAGGTGCTCCTTCTCTCACCACCATTTCCTTGAACTTTCTTTGTCTTCTCACATTTTTCTTGCTGCCTTTCTCCTGTTTCTTAGCTTACCCCAGTGATACCAGGTTGTTGATTGAAGTCTTTCTTTTCTGGGATGAAGACGTAAGCTTCAATTTTGTTTCTAGGGAAATCAATTGCAACCTGCAACCAGTGAATGGAAACCGCTCAGATACACTTAAGGCATCAGGAAATGTAGAGGTGATGCATGATATCCCAATGAAAAAGAATGTTTTTAGGCCATCCATCCTTGATGTGGAGGCTGATAAGCGTGACCGTTGGCGCGACGAGGAAAGAGACACCAATTCTTCACTGCACAAAGATCGCTGGAAGGATGGAGAAAAGGATTTGGGTGACAATCGTAGGGCAGATCGCTGGATAGAAAATTCTTTCAATAGAAATTTTGGGGAATCTCGCCGTGTTCCATCTGACCGGCGGATGGACTCCAGTAACTTAGATGGTAATTTTGATCAACGGCGAGAAAGCAAATGGAATACCCGTTGGGGACCTGATGACAAAGAACCAGAAGGCTTGCGTGAGAAGTGGGTGGACTCTGAGAAAGATGGTGACTTACTCCATGATAAAAGTTCCTCTCATGGTATCAGTCATGGAAAAGATGATAGGGATGGAAATCAATATCGACCATGGAGATCTGCTTCCTCTCAAAGCCGAGGAAGGGGAGGACCTCATCATCACCAGTCAATTACACCAAGTAAACAAGTTTCTACATTTTCGTATCGACGTGGGCGTGGAGAAAATACACCTCCAACCTTTTCAGTGAGTCGTGGCAGGAGTGGTTCCATTGGTAGCTCCATGAACCATTCTAATCCTATTCATTCTATTCCTTATGGTCCTCCGGGGGATAAATTTGAAGGCGATCAGGGTGAGCCTTATACATTAAAGTATGCTAGGACAAAGTTACTTGATGTGTACAGAACAACTGAAGTGAGATCATGTCAAAGTATACTTGATGGGCTTGTTCCTGTGCCTTCTCTTACATTAGAAGAGCCATTAGAACCTCTGGCACTTTGTGTACCAAATCCCGAGGAAATGGTTGTTCTGAATGGAATTGATATAGGTGATGTTATAAGTAGTGGTGCACCTCAAACATCAAAGGATGGGCGAAATTCATTAGATATGGGGCAGGCAAGACGAAACAAACTTGCAGTTGCTAGAGAAGATTTACCTCAGGATCTCAATGAAAACAAAGAGGAAGGCTCTGAGGGCACTAAAGTTAGTCAGATAAATTTCTCAGATGGAGCTTATGAAAGACAGATGCAATTTCAAGGGTCTCAATTGAAAATGGAAACCTCTCAAGATTGCAAGATTAGTTCTGGAAATAAGCTCAAAGCAGAAGCTTTCAGGGAAGATGGTAAGTACACACAGGCAGATGAGATGCGAAGTAGTAAGGAATCAAGTTTTCAAAAAAATATATCAGTCCATCCTGGTGCTACATGGAAAACCCTGTCAATAGGAGAAAACAAACATCCATCTGTGCCTAATTGGGTAGAAAATCCAAATGATGTCAGCTTTAGGACCCCTGAGAGATTATTACAACCATCAAAGAATCTTACTAATGAATTGGGAAACAGTTTGGCAAATCAGTTGTACACCAAAGACAACATTAGAGGTCAAATTGGTGATGATCCTATTATTAGAAGGCAGCTATCTGGAATTTTTGGTGAAGAACAGCGATTAAGAAAACCTATACAGTCTTCTCCTGAGGATCTTAGGCTTTATTATCAAGATCCATTTGGTGTAACTCAAGGGCCTTTCACTGGGATTGATATTATTGGGTGGTTTGAGGCTGGATATTTTGGCCTGGATTTACTTGTTCGCCCGGAAAGTGCTCCAAGTGATTCACCTTTTTCTTCACTTGGTGATGTCATGCCCCACTTGCAAGCCAAAGCCCAGCCACCGCCTGGTTTTGGTGGACCCAAGCAAATTGAACACGTGGATGCATCAACTAACCTAAGCTCCAGTGGGTTTGGACATTGTCACTCTGGTCTGAGCGATATGGAGCTGGTGAGAAATGAGACCAGGCATAAACATGGCTCAGCGACAGTAGCCGAAAATAAGTTTTTGGAGTCGCTGATGTCTGCTAATTTAAGCAGTTCATCTTTTGAGAATTCTTCTTTTTCAGAAGGTATGCCGATACATTTGGGAAATACTTCTCATAATTTACCTGTGAGTGGAGGAGTAGATGGAGGAAACAACCCGATCCTTATTGCGAAAAGAATGGCAATGGAAAGGCAGAAGTCTCTGCCTAATATATATCAGTATTGGCAAGGCAGAGATACAACCTCAATGGTCTCCAAATCAGAATTTTTTCAAGATTCCCGTGCACCACTATCAAAACTTCTAACCCCAATTTTGGACAATCCTCACCAGACTCCTTATTCCCAGAATGTTGACATGATGTCTATCCTCCATGGCATATCAGACGGATCATCATCTGGAATTAATAATGTGGCTGGCAGCTGGTCAAGTTTTACTGGCCAATGTGTGTCTGATGCACTCCAGAGTAAGATTGACATGCAACATGATCAGAATTTACCTACTTCGGCGGCATTTGGGCTTCAGCCACAGAGGTTTCAACTTCAGAACCCGCCATCTTTCACTAATCAACTTCCTCGAGCTATTGAAAATCCATCTCTGGTTTCAGCACCAGAAACTATAATGTCTTCAAATTTTTCTCAAGAACAACAGCTGTTAAATATTTTGCAGCAGCAGCAGTTGCTTTCATCTAATTTACCACAAGATTCACAGGTACACGCCTCTCCTGTGCAAATACAGAATGCATTTACTGATCTGCCTCAGATTCAGTCATCACCAGAGATGCTTCATGATGGTTCCCAACTTCCCATTTTGAATGTGCAAGGAGAACATGTTACTAACTTTGGGGATAGGCTATTGCAAGTTACCCAGGATGTCACTGCTAATGTTAGTTTGGAAGGTTCCTCCGTTACAGTTCCACATCAGTTATTTGGTACGCAGCAGAGAAGTATGAATGCTGCCTTTTCAGAACAGGCTAATGATATCCTCCTAAAGGAGATGTTGGCTCTACCGAAAATGGTTGAGAGTTCATCTTTGCCAAATATTATGAGCAGGTCAACGGAACACGCTGATCTTATAGAGGATGTTTCTGCCTCTGAAGTTAATGCTCCTAAAAGTATAGATCATGGTACAACACGCACTATAGATGTCGATAGAACTCTCATGAGTTTGACATCGGAGGCTGGTGTAGATTCTGAACTTTTTGAGAGTGATGAAGTCGTTGTTGGTTTATCATCAGGAGGAAAGGGAGAAATTTCTGATACTGCCTGTGAGGTGAAGATGAATCTGGAAAGTGTGTACGGAGAGCTAGAGGTGGAGAGGGATGCATGCAGTCATGGATCTTCTAAGCAAGAAGTGGAAAATGTTGAAATTCGTGAACCAAGAAAAGTTTCTGAAAAGAAATCTAAAAAACAAAAATTTTTGAAGTTACAACCCAACTCTGATCAAGGGAAGGGGATAGCTAAAAGTATACAGAATTGCAAGCTGCCTGAAAGCAGCAAGCCGGAGTCTGGTGAGTTGAAATTGGAGTCAGACAAAGGCGCAGAGCAGTCACTACAGCGACAGGAGTCAGGAAATGAAAGTAAGAAAATTATTTCTTCAGAGGCTGTGGATCCCCTACAAATTCAAAGTTCAATGCCTGGAAACTTTTCTAGAGATGGTGTTGAAACAGTTGGAATCAAAAGTGACACTGTAAGCATCCAATTACAGACTGGTCAAAGAGCTTGGAAGCCAGCCCCTGGTTTCAAAGCAAAGTCATTATTGGAGATTCAGGAGGAAGAACAGAAAAAAGCACAGACTGAAGTGGTGGTATCTGAGATCACTACTTCTGTTAAGTCCATCAGTTTGGCAACTTCTTGGACTGGGATTGTTGGCAATATTGGAGAAACTCAAAAAGGTTCTGGGAGACAAGAAGCTTCTCTAAATTCAAAGGTTAAGAAAAATCAGTTACATGACCTTTTGGATGAAGATGTTTTCCCTAAGTTTAGTGAAGGGGATAGTGAAGTTTCTGACTCTATGTACAGTTCATCTTCCCTAGTATCAATGAGCAAGTATTCAGAATCTATGGATGATGATAAATTTATCGAGGCTAAAGAAACTAAAAAGAGCCGGAAGAAGGCTGCAAAAGCCAAGAGGGTTGGAACCAAGGCCTCATTACCCGTCGCATCGGTTGACATACCTACTGGTTCAAGTCCCATAGAGAAAGTGAAAAGTTCGCGGCAAGCTCAGCAGGAAAAGGAAGTTATACCCACAATCCCATCAGGACCTTCTTTGAGTGATTTTGTTTTTTGGAAGGGGGGAGAGTCAGCAAACTCATCCCTTACCCCAGCATGGTCTACTGACTCTGGGAAGGTATCTAAGCCGACGTCTTTGAGAGACATACAAAAGGAGCAGAAACGAAGGATCTCCTCTCAGCATCCATCCCAAATGCCTACTCCCCAAAAATCCCAGCCAACTCAAATTTCCCAAAGCAATGTTCCTTCGTGGTCGGTTTCTGCATCATCTCCATCAAAGGCTGCATCCCCAATTTCAATTTATTCTCGCCCACCTTCTCAGTCAAAAAATAAAGGGGACGAAGACTTGTTTTGGGGACCAGTTGATAATTTGAAGCATGAAACGCAGCAGGCTGACTTTCCGCATCTCGCTACTCAGAGTAGCTGGGAAACAATAGCTACTACGGGAAAAGGAACTTCAGTTGGATCACTAGGCAGACAAAGATCATTGATTGGCAAAGCTTCTGAGATCTCTCTATCTACCTCAACCTCTGTTCAGTCATCTTTGAGAGGAAAAAGAGATGCTAGGACCAAGCATTCAGAAGCCATCGACTTCAGAGATTGGTGTGAAAGTGAATGCATTCGGCTCATTGGGTCAAAAGATACTAGTTTTCTAGAATTTTGCTTGAAGCAATCCAGATCAGAGGCCCAGTTGCTTTTGACAGAGAACCTTGGATCGTATGATCCTGATCACGAATTCATTGACAAATTCCTCAACTACAAGGAGCTGCTATCAGCAGACGTCCTTGAAACTGCATTTCAAACTCAGAATGATCTGAAGGCAACTGGATTCGGTCCCAAAGATGTGAATTCTCAGTATGCAAATTCAGGAGATGTTGATGAAAACTCCACTCTCACCCCAGGCGGAACTTCCAAGGGAGGAGGTAAAAAGAAAGGGAAGAAAGGGAAGAAGGTTAGTGCATCAATTTTGGGATTTAATGTTGTCAGTAACAGAATCATGATGGGTGAGATTCAGACCATGGAAGAAGATTAG 5424 42.66 MAARSDSDAHPKLSVTTPHQISIGAPSLTTISLNFLCLLTFFLLPFSCFLAYPSDTRLLIEVFLFWDEDVSFNFVSREINCNLQPVNGNRSDTLKASGNVEVMHDIPMKKNVFRPSILDVEADKRDRWRDEERDTNSSLHKDRWKDGEKDLGDNRRADRWIENSFNRNFGESRRVPSDRRMDSSNLDGNFDQRRESKWNTRWGPDDKEPEGLREKWVDSEKDGDLLHDKSSSHGISHGKDDRDGNQYRPWRSASSQSRGRGGPHHHQSITPSKQVSTFSYRRGRGENTPPTFSVSRGRSGSIGSSMNHSNPIHSIPYGPPGDKFEGDQGEPYTLKYARTKLLDVYRTTEVRSCQSILDGLVPVPSLTLEEPLEPLALCVPNPEEMVVLNGIDIGDVISSGAPQTSKDGRNSLDMGQARRNKLAVAREDLPQDLNENKEEGSEGTKVSQINFSDGAYERQMQFQGSQLKMETSQDCKISSGNKLKAEAFREDGKYTQADEMRSSKESSFQKNISVHPGATWKTLSIGENKHPSVPNWVENPNDVSFRTPERLLQPSKNLTNELGNSLANQLYTKDNIRGQIGDDPIIRRQLSGIFGEEQRLRKPIQSSPEDLRLYYQDPFGVTQGPFTGIDIIGWFEAGYFGLDLLVRPESAPSDSPFSSLGDVMPHLQAKAQPPPGFGGPKQIEHVDASTNLSSSGFGHCHSGLSDMELVRNETRHKHGSATVAENKFLESLMSANLSSSSFENSSFSEGMPIHLGNTSHNLPVSGGVDGGNNPILIAKRMAMERQKSLPNIYQYWQGRDTTSMVSKSEFFQDSRAPLSKLLTPILDNPHQTPYSQNVDMMSILHGISDGSSSGINNVAGSWSSFTGQCVSDALQSKIDMQHDQNLPTSAAFGLQPQRFQLQNPPSFTNQLPRAIENPSLVSAPETIMSSNFSQEQQLLNILQQQQLLSSNLPQDSQVHASPVQIQNAFTDLPQIQSSPEMLHDGSQLPILNVQGEHVTNFGDRLLQVTQDVTANVSLEGSSVTVPHQLFGTQQRSMNAAFSEQANDILLKEMLALPKMVESSSLPNIMSRSTEHADLIEDVSASEVNAPKSIDHGTTRTIDVDRTLMSLTSEAGVDSELFESDEVVVGLSSGGKGEISDTACEVKMNLESVYGELEVERDACSHGSSKQEVENVEIREPRKVSEKKSKKQKFLKLQPNSDQGKGIAKSIQNCKLPESSKPESGELKLESDKGAEQSLQRQESGNESKKIISSEAVDPLQIQSSMPGNFSRDGVETVGIKSDTVSIQLQTGQRAWKPAPGFKAKSLLEIQEEEQKKAQTEVVVSEITTSVKSISLATSWTGIVGNIGETQKGSGRQEASLNSKVKKNQLHDLLDEDVFPKFSEGDSEVSDSMYSSSSLVSMSKYSESMDDDKFIEAKETKKSRKKAAKAKRVGTKASLPVASVDIPTGSSPIEKVKSSRQAQQEKEVIPTIPSGPSLSDFVFWKGGESANSSLTPAWSTDSGKVSKPTSLRDIQKEQKRRISSQHPSQMPTPQKSQPTQISQSNVPSWSVSASSPSKAASPISIYSRPPSQSKNKGDEDLFWGPVDNLKHETQQADFPHLATQSSWETIATTGKGTSVGSLGRQRSLIGKASEISLSTSTSVQSSLRGKRDARTKHSEAIDFRDWCESECIRLIGSKDTSFLEFCLKQSRSEAQLLLTENLGSYDPDHEFIDKFLNYKELLSADVLETAFQTQNDLKATGFGPKDVNSQYANSGDVDENSTLTPGGTSKGGGKKKGKKGKKVSASILGFNVVSNRIMMGEIQTMEED 1807
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 55348695 55356589 - BLOR01558 Blo01g01558 55998

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01558 1807 MobiDBLite consensus disorder prediction 172 247 - -
Blo01g01558 1807 Gene3D - 598 679 IPR035445 -
Blo01g01558 1807 ProSiteProfiles GYF domain profile. 610 661 IPR003169 GO:0005515
Blo01g01558 1807 PANTHER GYF DOMAIN-CONTAINING PROTEIN 956 1806 - -
Blo01g01558 1807 PANTHER GYF DOMAIN-CONTAINING PROTEIN 76 954 - -
Blo01g01558 1807 MobiDBLite consensus disorder prediction 427 446 - -
Blo01g01558 1807 MobiDBLite consensus disorder prediction 1237 1270 - -
Blo01g01558 1807 MobiDBLite consensus disorder prediction 169 309 - -
Blo01g01558 1807 MobiDBLite consensus disorder prediction 1523 1571 - -
Blo01g01558 1807 MobiDBLite consensus disorder prediction 427 442 - -
Blo01g01558 1807 PANTHER GYF DOMAIN-CONTAINING PROTEIN 956 1806 - -
Blo01g01558 1807 PANTHER GYF DOMAIN-CONTAINING PROTEIN 76 954 - -
Blo01g01558 1807 MobiDBLite consensus disorder prediction 1416 1577 - -
Blo01g01558 1807 MobiDBLite consensus disorder prediction 1161 1194 - -
Blo01g01558 1807 SMART gyf_5 611 666 IPR003169 GO:0005515
Blo01g01558 1807 MobiDBLite consensus disorder prediction 1451 1469 - -
Blo01g01558 1807 CDD GYF 610 667 IPR003169 GO:0005515
Blo01g01558 1807 SUPERFAMILY GYF domain 604 667 IPR035445 -
Blo01g01558 1807 MobiDBLite consensus disorder prediction 248 309 - -
Blo01g01558 1807 MobiDBLite consensus disorder prediction 1485 1508 - -
Blo01g01558 1807 MobiDBLite consensus disorder prediction 1745 1767 - -
Blo01g01558 1807 MobiDBLite consensus disorder prediction 1737 1781 - -
Blo01g01558 1807 MobiDBLite consensus disorder prediction 1195 1218 - -
Blo01g01558 1807 MobiDBLite consensus disorder prediction 1220 1236 - -
Blo01g01558 1807 MobiDBLite consensus disorder prediction 1161 1274 - -
Blo01g01558 1807 Pfam GYF domain 614 660 IPR003169 GO:0005515
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01558 - - - qsu:112038346 1455.65
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01558 Blo-Chr1:55348695 Blo02g00198 Blo-Chr2:1796365 2.09E-16 dispersed
Blo01g01558 Blo-Chr1:55348695 Blo12g00910 Blo-Chr12:27273691 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g930 Blo01g01558 . Bda01g00536 Bda03g00257 Bpe02g00397 Bpe04g00211 Bma04g00206 Bma01g02315 Cmo05g00241 Cmo12g00428 . . . Car12g00452 Sed11g1026 . Cpe07g00430 Bhi04g00258 Tan02g1949 Cmetu03g2269 . . . Lcy13g1995 Cla08g01498 Cam08g1988 Cec08g1563 Cco08g1700 Clacu08g1678 . Cre08g1461 Cone4ag1904 Cone7ag1818 . . . . . Cme03g01966 . . . . . . . . . . . Cma12g00478 Cma05g00232 Car05g00194 . Cpe11g00193 . . . . . . . . . . . . . . . Lsi08g01403 Csa02g02043 Chy03g01470 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004078 3 2 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 3 1 44
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo01g01558 Blo_Chr01 FPKM 26.003298 25.39558 17.713818 17.632607 47.231346 44.711433 47.280651 38.230072 33.267887 34.368088