Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01570 ATGGAGTTTCGAAAATCGTCTACTATCTCTAAGAAGCTCGCAAATGGCCGCAGTTTCAACGATAAATCAGCCTACGATGGCGTTTTCGCTGCACCGTCAAAGCGTGGAACTCCGGTTTTTTCTGCTGGTCTGGAGGATTATCGTGAGATTTTCGGTGGTACGCGAAGCTCCAGTATTCCGATTCTTGATTTTTCGGCTTTACAAGAGAAAAAGCCATCGATTGATGTTCGGAACTCGAAGCTCGAATATTCCAAGGTTTTCGGGACCTTGGAAGAATTAGATTTTTCTGTACCTTACGAGGAACTACAAGGCGAACCAAAGAAAGCTGACACATCCTCTGAGAAACCTCTGAGCACAGCTGGAAGAGTATCGCCTCCAGTAAGGAAAGGTTCTTCTATGGATTTAGATAAAGACGAAGTTTTCTCGCATGAATATCAATCATTGGATGCAACGAAAACGTTTAACATGGCATATAACAAAGTCAACCAAGGAAGCAATCGTAGTACAAAGGGGATTACCCATGTTGTTCAGCTTCAAGCTACTTCTGGTTATACTTGTATATTTAACGAATTCAGTCCATTGCAGTCTAGTGAAGGTGAAAAGCCAGCTTCTAAAGCAGATGACGATATTAGGAATAGAGTTAAAGCTGTTGGATCAACAAGAGACACAAAAGATCACCCTCCTGCTAGTCTGGAACGACAGACTTCTAGAGCAAATGGTTTTCAAAACAAAGATGATTGGTATGGTAAACATTCCCTTAAGATGAAGTTTGATTCATGCAACTTGGATCGAGGCTCGTGTTCTGCTGAGCCAACTATTTTTTCCAGGTCTGCTCAATTTGGCAAAAATTTAACTTATTCGGAGACATCAATGGCATCGAAATCTGAAGTTTGTGATGCTTGTGAGAAAGCTGGCACTGTTTGTTCTCCTCCATGCTTCGAGGAGGAAGTCGACGTCAATTCAGTTGCTGCTGCCTCCATTGCAGCTTTGAGAAAGGCAATAGCAGATGCTCAAGCGAAGATAAAAATTGCGAAGGAGTTGATGGAAAGAAGGAAGGGGGGTCTTCATGGTCGGAAAATGAGCTTTGCTGATAAATTGAATGGTGAAGAGAGAAGAGAGGGTGGAAATTCATATACTGCAGGCAGATCCAAAGATGAGAAATCTCAAGAAACATGTGGAAAACCAGAGGCTATGGTGAACGCTTCTTCTGAAATAAGTAATCAAAATTTGAGAGAATTACCAGAAGTTGCTAGTGTAGAAACCCGATCAAAGAATATTTCATCAGGTCGAGCTCATTGCCAACCTGAAGAATCAGAGTTACTTGGAAATGAACAGTTTTATGAACTTGATCGTGCAGGTATTAAATCCTTTGAGAACGCTTACCATGATGAGACCATTACAAAATCGCTCCACAACTATGACCAGATGCAAAATAGAATGACCAAGAAAAACATTGATAACCCAGAAGAGTTTTCTGCGAGTCTACATGGGGTTGAGGAAGCTAGACCGGAATCATTACCTGGGGACAAAAATCTTGAGACTAAAAAGTTGGATGAAAACTCTGTAATTAGACAAATAATGGCTCGTGATTGGGTAGAGTATTTGAAGATTAAAATGGGTTTCAAGCAAGACAAAGACGTGATTGGAGAGAAAGTTCAGATGTCCTATGAGAAGGAAAATTGTCAAGAGAGACTAGGAGAACCCCCGGAAGGAAAAGAATCAGTACAGGAAGGCCAAAAACTCGGAACTAAAGAGTTGGAGGAACTCACTGTGAAGCAACTAGTTAAGGGTCATGAGTGGATAGAGGATGAGAAGTTCAAAATGGTTTATGGGCAAGACAAAAATGAGATTAGAAGAAAGGATTTTGTCTGCGGAGAAGATTCTGATAAGAAACCTGCCCAAGTTGATGAATTTGGCAGACTTAAAGATTGTATTAATGACTTTCGAATTGGAGGGGAAACAAAACTTGAAGAAAATTGTGAATCTCGAGGAAATACAAAACATCAAAAGTTTGGCGAGGACGAAGAAATGATTGCAGACCTTTCCAATCAGATTGAAGAAAATGGAAAAATTTGTGAACCTTTTGAAGGAAAGAGAATAGATTTGAAGTTTGATAAAATTGCAGAAACTGAGATTAAAATAACTCAAGATGGTCTAAATTTCTGGGAGAGTAGACTTGAGGTAACCAAGGATTTGTGTAATTGGAATTTAAGTGATAATCTGAACAAAAATGGAGGAGCTAATGAAATTTTGGATCATGGTAAAGTAGTGGGAGGAACTTCCAATCATCCTTTGTCTGAAGATTCTAAAAATAACTTTGATCATCCTTTGTGTGAAGATTCTAAAAATAACTTTGATCATCCTTTATGGGAAGATTCTAGAAATAAAATGGAAGTAGTTAAGACTTCTGTTGAAACCGGAAGAATTGAGAAAGACTCGGAGGAATGTATGCAAGTAAATGAGGTGGAGGAAAATTCATCTCTTAAAACTCCTTTCCTAGTTGAAGATACGTTTATACTCGAGAGTGAAATGGAAAGTTCAAATGAAGTGGAAGAATTGACACAGACTTTCTCATCTGATTCACACAAAATTGGCTTTGGGATAACTGACGTTGAATTTGGGCAAAAGAAATACAAAACGGACGTAGAAGAGCATAAAAATGACTTTACAACGGAAATTCGTGCTGAAGAATTTGCTTCTAAAGTGGAAGAAGTGCACTCTAAAGTAGAAGAAGTGCACGAGTTTTTTGTCATGGAGGATGAAGTTTTAGGGAGTCTACAAAAAGAAGGTAATAATGTCCTGTCCAATGATGATAAAGGTTTACAAAGTAATATAAACGATCTCAATGAATGCTATCCACTTCGAATGTCTGAAGAAAAAGGAAAATTCACTGTGGCAGCTGAGGAGACCATAACAAGCCAATGTACAACAACAATTGGGGTTCATCAAGCTTCTGAAACAGTAGAAGAGTGTTGCACCAATTATATTTTTGATAACGAAGGCGGGCTGGAATCGGAAGTAAACAATCAGGAGTATTTACACACTAATAGTATGAATGAAGGAATGGAAAAATGTTTTGAAATAGATGAGTTGATCGAAACAGAGAAGCGCAATGTTGAAGGTGAGCAGAAGCAACAAATAGTACCACCCAAAAAAGTTACTGAAACCAACCATGAATTTGAAAACCCAGCGGAAGTAGAAAATGGACACCAGATAAAAAATGACGAAGCCAAAGAAAGTGAGAAAGAAAAAGAACAGGGTGATGTAGGAAATGAGGGAAAAGAGCAAATAGTTCCTCCCAAGGAAGGAACACAAACCAACCATAAATCTGAAAGACTACTGGAAGTAGAAAAGGAGCACCAGAGAAAAATAGATGAAGCCAAAGAAAGAGAGAAGGAAAACAAACAAAGTGACTTAGAAAATGAGCAAAACCAACAAATAATCCCGCCCAAGGAAGGTACACAAACTAAACATGAAATTGAAAGACTAGCAGAAACAGAAAAGGAAGACCAGAGAAAAACAGATGAAGTCAAAGAAAGGGAGAAGGAAAAAGAACTAGAGAGAATTTCTGTTGAGAGAGCTATTTCTGAAGCTCGTGAAAGGGCATTTTCTGAAGCCAGAGAAAGGGTTGTTGCCGAGAGAGCTTCTGCTCAAACTCGGCTAAAAGAAAAGACTACTGCACGAGAACAGCCAGGCAAGACATCTACAGAGAGTAACAATAAGTTAGGAGCTGAGAAGGCTTCTATTGAAGCCAAACTAAGAGCTGAACGTAATGCAGTAGAGAGAGCTACTGCAGAGGCTAGGGAGCGGGCACTAGAGAAAGCAATGTCTAAAAAGGCTTTTTCTGAGGCAAAGAACCTGACTGAAAAGATTGTTGAGGAAAAGCTTTCTAATGCAGCGAGTGATGGTGAAAGAAGGCGAGATTTTCCTTACAATGTGAGGGCCTCTATTTTGATGCTGCATTTCTCGTTATTTTCTATGAATCATTTATATAACGATACATCTGCTTCCACAAGTTCAAGAAATACAATTTTTTCAAATGTCGGAGTTCCTGACTCTGAGAATTCTAATGGATCGATTGGAGAAACAGCTCAGAGGCATAAAGCTAAGTTGGAGAAGCATCAACGAATCGATGAGCGTGTGGCAAAAGCACTTGCAGAGAAGAGCTTCCGAGATCGTCGTGCGCTGCAAGAACAAGCAGAAAGAAATAGATTAGCTGAATCTCTTGATGCTGATGTAAAAAGGTGGTCGAGTGGAAAAGAAGGAAATTTGCGTTTGTTGCTTTCAACTCTACAATATATACTTGGGCCAGATAGTGGGTGGCAGCCAATTCCTCTAACAGATATCCTTGCAACGAGTGCAGTTAAGAAAGCTTATCGTAAAGCAACTCTGTGGGTTCATCCCGACAAATTACAACAACGGGGGGCAAGTATCCAGCAGAAGTACGTTTGCGAGAAGGTTTTTGATCTTCTGCAGGTTGGTTGTGTTCATATAACTGTCTCTAAGATTGGAACTTAA 4518 39.55 MEFRKSSTISKKLANGRSFNDKSAYDGVFAAPSKRGTPVFSAGLEDYREIFGGTRSSSIPILDFSALQEKKPSIDVRNSKLEYSKVFGTLEELDFSVPYEELQGEPKKADTSSEKPLSTAGRVSPPVRKGSSMDLDKDEVFSHEYQSLDATKTFNMAYNKVNQGSNRSTKGITHVVQLQATSGYTCIFNEFSPLQSSEGEKPASKADDDIRNRVKAVGSTRDTKDHPPASLERQTSRANGFQNKDDWYGKHSLKMKFDSCNLDRGSCSAEPTIFSRSAQFGKNLTYSETSMASKSEVCDACEKAGTVCSPPCFEEEVDVNSVAAASIAALRKAIADAQAKIKIAKELMERRKGGLHGRKMSFADKLNGEERREGGNSYTAGRSKDEKSQETCGKPEAMVNASSEISNQNLRELPEVASVETRSKNISSGRAHCQPEESELLGNEQFYELDRAGIKSFENAYHDETITKSLHNYDQMQNRMTKKNIDNPEEFSASLHGVEEARPESLPGDKNLETKKLDENSVIRQIMARDWVEYLKIKMGFKQDKDVIGEKVQMSYEKENCQERLGEPPEGKESVQEGQKLGTKELEELTVKQLVKGHEWIEDEKFKMVYGQDKNEIRRKDFVCGEDSDKKPAQVDEFGRLKDCINDFRIGGETKLEENCESRGNTKHQKFGEDEEMIADLSNQIEENGKICEPFEGKRIDLKFDKIAETEIKITQDGLNFWESRLEVTKDLCNWNLSDNLNKNGGANEILDHGKVVGGTSNHPLSEDSKNNFDHPLCEDSKNNFDHPLWEDSRNKMEVVKTSVETGRIEKDSEECMQVNEVEENSSLKTPFLVEDTFILESEMESSNEVEELTQTFSSDSHKIGFGITDVEFGQKKYKTDVEEHKNDFTTEIRAEEFASKVEEVHSKVEEVHEFFVMEDEVLGSLQKEGNNVLSNDDKGLQSNINDLNECYPLRMSEEKGKFTVAAEETITSQCTTTIGVHQASETVEECCTNYIFDNEGGLESEVNNQEYLHTNSMNEGMEKCFEIDELIETEKRNVEGEQKQQIVPPKKVTETNHEFENPAEVENGHQIKNDEAKESEKEKEQGDVGNEGKEQIVPPKEGTQTNHKSERLLEVEKEHQRKIDEAKEREKENKQSDLENEQNQQIIPPKEGTQTKHEIERLAETEKEDQRKTDEVKEREKEKELERISVERAISEARERAFSEARERVVAERASAQTRLKEKTTAREQPGKTSTESNNKLGAEKASIEAKLRAERNAVERATAEARERALEKAMSKKAFSEAKNLTEKIVEEKLSNAASDGERRRDFPYNVRASILMLHFSLFSMNHLYNDTSASTSSRNTIFSNVGVPDSENSNGSIGETAQRHKAKLEKHQRIDERVAKALAEKSFRDRRALQEQAERNRLAESLDADVKRWSSGKEGNLRLLLSTLQYILGPDSGWQPIPLTDILATSAVKKAYRKATLWVHPDKLQQRGASIQQKYVCEKVFDLLQVGCVHITVSKIGT 1505
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 55448344 55454634 + BLOR01570 Blo01g01570 56010

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01570 1505 Coils Coil 1246 1270 - -
Blo01g01570 1505 Coils Coil 1163 1183 - -
Blo01g01570 1505 MobiDBLite consensus disorder prediction 1213 1243 - -
Blo01g01570 1505 MobiDBLite consensus disorder prediction 1347 1363 - -
Blo01g01570 1505 Gene3D DnaJ domain 1373 1496 IPR036869 -
Blo01g01570 1505 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 6 1492 - -
Blo01g01570 1505 Coils Coil 327 347 - -
Blo01g01570 1505 MobiDBLite consensus disorder prediction 1036 1186 - -
Blo01g01570 1505 SUPERFAMILY Chaperone J-domain 1367 1492 IPR036869 -
Blo01g01570 1505 MobiDBLite consensus disorder prediction 354 392 - -
Blo01g01570 1505 PANTHER AUXILIN-LIKE PROTEIN 1 6 1492 - -
Blo01g01570 1505 MobiDBLite consensus disorder prediction 201 231 - -
Blo01g01570 1505 Coils Coil 1110 1145 - -
Blo01g01570 1505 MobiDBLite consensus disorder prediction 101 133 - -
Blo01g01570 1505 MobiDBLite consensus disorder prediction 1154 1186 - -
Blo01g01570 1505 MobiDBLite consensus disorder prediction 1105 1139 - -
Blo01g01570 1505 MobiDBLite consensus disorder prediction 195 243 - -
Blo01g01570 1505 MobiDBLite consensus disorder prediction 354 394 - -
Blo01g01570 1505 MobiDBLite consensus disorder prediction 1347 1374 - -
Blo01g01570 1505 MobiDBLite consensus disorder prediction 1213 1230 - -
Blo01g01570 1505 MobiDBLite consensus disorder prediction 1054 1091 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01570 - - - bhj:120085690 685.641
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01570 Blo-Chr1:55448344 Blo06g00180 Blo-Chr6:7569921 2.12E-49 dispersed
Blo01g01570 Blo-Chr1:55448344 Blo16g00053 Blo-Chr16:1913155 9.48E-21 wgd
Blo01g01570 Blo-Chr1:55448344 Blo04g00910 Blo-Chr4:10683239 7.55E-10 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g969 Blo01g01570 . . . . . . Bma01g02328 . . Cma01g01918 . Car01g01499 . . . . . . . . . . . . . . . . . . Cone4ag1922 Cone7ag1834 . . Lsi04g01688 Csa03g04228 Chy04g00487 . . . . . . . . . . Cmo01g01981 . . . . . . Cpe02g00118 . . . . . . . Cla05g01924 Cam05g2061 Cec05g2074 Cco05g2125 Clacu05g2055 Cmu05g1932 Cre05g2055 . . . Cme04g00546
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008012 0 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 8 1 0 35
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo01g01570 Blo_Chr01 FPKM 4.526316 2.755291 6.897865 6.967473 5.025643 5.094401 8.103655 4.483044 4.842429 5.72621