Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01577 ATGGATACGTATTTTCCGAGCTTGAACAATCAAAGAAATGCAGTAATAACTCCATATACGGAAGACCCGAAAATCGATTCTTATACAGAAATGCCTTTCTGCTCTAATAGTATGGTGATGGGCCTGAGTCAAGGTCCTGCTCATGGATTTTACTCCAGCACTTCGGTCGGGATTTCTCAATCTCCTTCCAACTGTGTAGATAGTATGGATGGCAGATATGAGATGGCCTTTCTTCCACAATTTGGACATTCATTAGGCATCCAAGGCTTTGCTTCAGAGATAGAAACTGAAAAAATTGATCATCTGGGAATTATAAATGGCGGAAAGAATAGTCAGTGTGGGGGATTATCGCTTAGTCTCGGCTCGAAGATACCGTTTTCTTCTGGAAATCGAAGTGCTGCGGACATGGAGTCTTTTCCAAATTCTTCTGGCTTGGCCACCCTCGGCAAAATGAACTCTAATGTTTATGATCTATATGAAGCTTCGGTTTTGGCTAACACTGGCTTAAACTCAAAATATATCAAGGCAGCTCAACAATTGCTTGACGAAGTGGTGAATATAAGAGCGGCTTTGAATGAGATCAGATCTAACAAGCATAAAAGCTTCGTTAATAACTCGAACAATAACAATGGTGGATCTAGTGATCGATCTTTGGATATGTCTTCTAGTTATGGCGCAACGACGGCCAACCCCTCTCGGGAACTCTCATCTACAGAGCGGCAGGACTTGAAGAACAGAAGTGCTAAGCTTTTGTCCATGGTTGAAGAGGTTGATGAAAGACATAGACAATACTATCAACAAATGCAAATAATGGTGTCATCTTTTGATATGATAGCTGGTTGTGGGGCTGCAGAAGTATATACAGCACTAGCTCATCAAACCATTTCACGCCATTTTCGACGTTTACGAGATGGAATCAGTGATCAGATTCAGGTAATGAGGAGAAATTTGGGAGAGGAAGATTGTTCATCAACTGGTCAGAGGGGAATTCCTCGCCTACGTTATGTCGATCAGCAGCTCAGACAACACAGGGCTCTTCAACAACTTGGTTTCACCCAACATTCTTGGAGGCCTCAAAGAGGGCTTCCCGAGAGCTCTGTCTCGATCCTTCGTGCTTGGCTGTTCGAACATTTCCTTCATCCCTATCCGAAAGATACTGAGAAACTCACGCTCGCAAGGCAGACGGGACTGACACGAAATCAGGTTGCAAACTGGTTCATAAATGCACGTGTGCGCCTCTGGAAGCCCATGGTGGAAGAGATGTACAAAGAGGAGTTTGGTGATCCAAAGATGGACTTCAACTTTTCGCCAGACAGAGACGAAGATTTGCAGGGCAGCGGAATATCATCGAATGCCGATGGCGAGCAAATTCAACAGTCGAATTCAAATGAAATTTCTGGTATGGAAATGAAGGAAAACGCAAGCAAAATAGGAGTCGAAAGCCTCGGAAATGCAGACAATATTGCCAATCACCCTCTTTATCCGCACAATGTTATGTTATCGAACCGAGTCTCGCTAGCGTTGGAGCTGAGGCATTGCGAAAAAAATGACGGCTTTTTGAAATCGGACATTGTTCGTAATGCAGAAGAAGCTCCAATGGGCGATGATGGATTGATCGAATCCGATCGAATCCAATACCGGAATAACTCTCTGATCGACTGTTTGTACTATAAATACCGATTGGTGGAAGTGTAG 1695 43.66 MDTYFPSLNNQRNAVITPYTEDPKIDSYTEMPFCSNSMVMGLSQGPAHGFYSSTSVGISQSPSNCVDSMDGRYEMAFLPQFGHSLGIQGFASEIETEKIDHLGIINGGKNSQCGGLSLSLGSKIPFSSGNRSAADMESFPNSSGLATLGKMNSNVYDLYEASVLANTGLNSKYIKAAQQLLDEVVNIRAALNEIRSNKHKSFVNNSNNNNGGSSDRSLDMSSSYGATTANPSRELSSTERQDLKNRSAKLLSMVEEVDERHRQYYQQMQIMVSSFDMIAGCGAAEVYTALAHQTISRHFRRLRDGISDQIQVMRRNLGEEDCSSTGQRGIPRLRYVDQQLRQHRALQQLGFTQHSWRPQRGLPESSVSILRAWLFEHFLHPYPKDTEKLTLARQTGLTRNQVANWFINARVRLWKPMVEEMYKEEFGDPKMDFNFSPDRDEDLQGSGISSNADGEQIQQSNSNEISGMEMKENASKIGVESLGNADNIANHPLYPHNVMLSNRVSLALELRHCEKNDGFLKSDIVRNAEEAPMGDDGLIESDRIQYRNNSLIDCLYYKYRLVEV 564
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 55576788 55579432 - BLOR01577 Blo01g01577 56017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01577 564 SMART HOX_1 356 420 IPR001356 GO:0003677
Blo01g01577 564 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 138 520 - -
Blo01g01577 564 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 10 138 520 - -
Blo01g01577 564 SUPERFAMILY Homeodomain-like 357 423 IPR009057 -
Blo01g01577 564 SMART prehox3 162 308 IPR006563 -
Blo01g01577 564 MobiDBLite consensus disorder prediction 200 242 - -
Blo01g01577 564 MobiDBLite consensus disorder prediction 443 458 - -
Blo01g01577 564 Gene3D - 352 429 - -
Blo01g01577 564 Coils Coil 240 260 - -
Blo01g01577 564 MobiDBLite consensus disorder prediction 435 458 - -
Blo01g01577 564 MobiDBLite consensus disorder prediction 200 236 - -
Blo01g01577 564 Pfam Associated with HOX 170 307 IPR006563 -
Blo01g01577 564 Pfam Homeobox KN domain 373 412 IPR008422 GO:0003677|GO:0006355
Blo01g01577 564 Coils Coil 177 197 - -
Blo01g01577 564 CDD homeodomain 356 417 IPR001356 GO:0003677
Blo01g01577 564 ProSiteProfiles 'Homeobox' domain profile. 353 416 IPR001356 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01247 Blo-Chr1:47397235 Blo01g01577 Blo-Chr1:55576788 2.11E-81 dispersed
Blo01g01577 Blo-Chr1:55576788 Blo12g00539 Blo-Chr12:23334895 2.61E-90 dispersed
Blo01g01577 Blo-Chr1:55576788 Blo12g00899 Blo-Chr12:27179806 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11936 PF07526 POX 5.40E-44 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01577 - - qlo:115974406 451.825