Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01580 ATGGCGGATTCTGGCTCTGGCCCTGGAAAAACGATGTGGTGTTCAGTCCCTGAAAGGCTCCAGCTCCATGGGGCAATGCTTGCTTTGCAGTTTGGTTATGCAGGGTTTCATGTGGTTTCTAGGGCTGCCCTTAATATGGGCATTAGTAAGCTGGTTTTCCCGGTCTACAGAAACATCATTGCCCTCATTTTGCTCCTTCCATTTGCATACTTCCTCGAAAAGAAGGAGAGGCCTGCTATTAATCTTAACTTTCTTATCCAGTTCTTCCTTCTTGCACTGGTTGGAATTACAGCAAACCAAGGATTCTACTTGCTGGGTCTGGATAACACTTCACCCACCTTCGCGTCGGCGATTCAAAACTCAGTTCCGGCAATTACCTTCCTCATGGCCTTAACTATTTGCAGAATAGAACATGTGAGAATGAACAGAAAAGATGGCATAGCAAAGGTTCTCGGTACAGTCTGCTGCGTCGCCGGAGCGACGGTGATAACTCTCTACAAGGGTCCGACCATATACAGCCCATCGCCGTCTCTACAAATGAGCCCGAGTGAGCCCCTTTTCCCTTCCCTAGGCGATGCAAACGGAAAGAACTGGACCCTAGGGTGCATCTACCTCATCGGCCACTGCCTATCCTGGTCCGGATGGCTCGTTCTACAGGCGCCGGTGTTGAAAAAATACCCAGCTCGGCTTTCCGTTACCTCCTACACTTGCTTTTTTGGACTAATCCAGTTCATTGTCATCGCTGCTTGCGTGGAAAGAGACTCCCAAGCTTGGCTCTTTCACTCCGGCGGAGAAATCTTCAGCGTTCTCTACGCTGGCATAGTGGCGTCTGGCATAGCTTTCGCTGTACAGATATGGTGCATTGACAGAGGTGGCCCCGTCTTCGTCGCTGTTTATCAGCCTGTTCAGACCCTCGTTGTCGCTATCATGGCTTCACTTGCTTTAGGCGAGCAGTTCTATTTGGGAGGAATCATTGGAGCGGCGCTGATAGTCGTAGGATTATACCTTGTTCTCTGGGGAAAAAGTGAAGAAAGAAAGCTAGCCCTAGAAAAGGCAGATATCCTGATCCAGTCCGCCGCGGACCACAGCAACAACAGGACAACTGCACATATCAAGCCGTCCCTCACTCAGCCACTCCTTCCTCAGTCAACAGAAAACGTTTGA 1164 49.91 MADSGSGPGKTMWCSVPERLQLHGAMLALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIALILLLPFAYFLEKKERPAINLNFLIQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMALTICRIEHVRMNRKDGIAKVLGTVCCVAGATVITLYKGPTIYSPSPSLQMSPSEPLFPSLGDANGKNWTLGCIYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGLIQFIVIAACVERDSQAWLFHSGGEIFSVLYAGIVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASLALGEQFYLGGIIGAALIVVGLYLVLWGKSEERKLALEKADILIQSAADHSNNRTTAHIKPSLTQPLLPQSTENV 387
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 55602734 55604686 - BLOR01580 Blo01g01580 56020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01580 387 PANTHER WAT1-RELATED PROTEIN 14 369 IPR030184 GO:0016021|GO:0022857
Blo01g01580 387 Pfam EamA-like transporter family 27 164 IPR000620 GO:0016020|GO:0016021
Blo01g01580 387 Pfam EamA-like transporter family 200 338 IPR000620 GO:0016020|GO:0016021
Blo01g01580 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 343 - -
Blo01g01580 387 PANTHER WAT1-RELATED PROTEIN 14 369 - -
Blo01g01580 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 167 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g01580 Blo18g00793 CCT
Blo01g01580 Blo18g00793 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01580 Blo-Chr1:55602734 Blo04g00378 Blo-Chr4:3024286 5.71E-82 dispersed
Blo03g00917 Blo-Chr3:35175615 Blo01g01580 Blo-Chr1:55602734 2.16E-72 dispersed
Blo16g01151 Blo-Chr16:40037414 Blo01g01580 Blo-Chr1:55602734 3.38E-53 dispersed
Blo19g00123 Blo-Chr19:3494637 Blo01g01580 Blo-Chr1:55602734 1.41E-66 transposed
Blo01g01580 Blo-Chr1:55602734 Blo18g00793 Blo-Chr18:23266809 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01580 - - zju:107420453 657.136