Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01581 ATGGCAGGCTTCTTCTATCTAGGTGGAAGAGAAGGCCCACCAAGCAAACAAGAAGAAGATCAAGCTGAGAGGGAGCAGAACCTGTTTTTGTATCGAAACGAGGAGATCTACAACAAGGGTTTCGAGATATGGCCTCAGTACAGTCATCAACAACAACAAAACCAAAGCTTGAACAGCCACCTGTCGTTCGGAGTAAGTCCTGGCCACCGAAGAAGCTTCATCAACGTTTCCGATGATCCGTCCAGATCGGGATTCACCGTGAGTATACAAGGAGGGGCGGTTGGAGGAATGAATTGTCAAGACTGCGGAAATCAGGCTAAGAAAGATTGCTCCCATCTTAGGTGTAGAACTTGCTGTAAGAGTCGAGGGTTTCAGTGTCAAACCCACGTCAAGAGCACATGGGTTCCGGCGGCCAAACGCCGCGAAAGACAGCAACAACTCTTAGGTTCGAACTCCCAGCAAGAACTGCAATTTCCGAAAAGGCAGAGGGAAAATCAAGGACTCTCCCCTTCTCTTGCCTGTGGTAGACTATCCACGGCAGCCACAGGGTTAGAGCTGGCACAATTTCCAGCGGAAGTGAATTCTGCGGCAGTTTTTCGGTGTGTGAGAGTGAGTGCTATGGATGATGTGGACGACCACTTCGCGTATCAGACGGCTGTGAACATCGGAGGACATGTTTTTAAGGGAATTCTGTACGATCAAGGACCGGAAGGAAGCTATTCTGCAGGAGGGGATAGCTCTTCCGGCCACGGCGGAGAGGGAATCCAGCAACTCAATCTCATAACCGGAATGACAGGAAATACGTCCGCAGCTACAGCCACTAAAGCTGCCACTTCTAACCCATCTGCTTGTTTGGCCGATTCTTCACTATATCCTCCGCTCAATGCTTTCATGGCTGAACTCGATGCCACTTTTTCCTGTTTATCCGTCACCTTGCCGGATAAAAATGGGACTAACTAG 960 49.58 MAGFFYLGGREGPPSKQEEDQAEREQNLFLYRNEEIYNKGFEIWPQYSHQQQQNQSLNSHLSFGVSPGHRRSFINVSDDPSRSGFTVSIQGGAVGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQLLGSNSQQELQFPKRQRENQGLSPSLACGRLSTAATGLELAQFPAEVNSAAVFRCVRVSAMDDVDDHFAYQTAVNIGGHVFKGILYDQGPEGSYSAGGDSSSGHGGEGIQQLNLITGMTGNTSAATATKAATSNPSACLADSSLYPPLNAFMAELDATFSCLSVTLPDKNGTN 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 55617084 55618599 - BLOR01581 Blo01g01581 56021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01581 319 MobiDBLite consensus disorder prediction 1 24 - -
Blo01g01581 319 PANTHER PROTEIN SHI RELATED SEQUENCE 7 1 300 - -
Blo01g01581 319 MobiDBLite consensus disorder prediction 145 169 - -
Blo01g01581 319 Pfam Domain of unknown function (DUF702) 96 237 - -
Blo01g01581 319 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 300 IPR007818 GO:0003700|GO:0006355
Blo01g01581 319 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 98 140 IPR006510 -
Blo01g01581 319 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 188 236 IPR006511 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g01581 Blo18g00791 CCT
Blo01g01581 Blo17g00762 CCT
Blo01g01581 Blo18g00791 ECH
Blo01g01581 Blo17g00762 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01581 Blo-Chr1:55617084 Blo06g00331 Blo-Chr6:19623522 3.39E-85 dispersed
Blo01g01581 Blo-Chr1:55617084 Blo17g00762 Blo-Chr17:24256003 1.72E-113 wgd
Blo01g01581 Blo-Chr1:55617084 Blo18g00791 Blo-Chr18:22983635 2.15E-110 wgd
Blo01g01581 Blo-Chr1:55617084 Blo04g00529 Blo-Chr4:4553860 2.03E-30 wgd
Blo01g01581 Blo-Chr1:55617084 Blo04g00900 Blo-Chr4:10559249 2.31E-73 wgd
Blo01g01581 Blo-Chr1:55617084 Blo05g00815 Blo-Chr5:29760986 1.47E-80 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11937 PF05142 DUF702 1.10E-62 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01581 - - jre:108991308 375.17