Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01589 ATGGATTCTGCTGAAGCGAAGGTGAATGCTGGTGGTTTGGTTTGTGGCGGGCAGACTAATCTTCTTGAGGAGATGAAGTTATTGAAAGAAATACAGGATCAGTCTGTTGCTCGAAGGGTCATAAATTCAGAGTTATGGCATGCCTGCGCCGGCCCTCTCGTTTCTTTGCCTCAGATGGGGACCCTTGTATATTACTTCCCTCAAGGACATAACGAGCAGGTAGCAGTTTCAACTAAAAGAATTGCAACTTCCCAGATTCCAAACTACCCAAATCTTTCATCTCAGCTGATGTGCCAAGTTCAAAATATCACATTACATGCAGATAAAGATACCGACGAGATTTATGCTCAAATGAGTCTCCAGCCAGTGAACTCTGAAAAGGATGTTTTCCCAATACCAGACTTTGGATTGCGGCCAAGTAAACATCCGAGTGAGTTTTTCTGCAAAACTTTGACTGCAAGTGATACTAGCACCCATGGTGGTTTCTCTGTACCACGCCGGGCAGCTGAGAAACTTTTTCCTCCATTGGATTTTACAATGCAACCACCAACTCAAGAACTTGTTGTGCGGGACTTGCACGATAATACATGGACTTTTCGCCACATATACAGAGGGCAGCCAAAGAGACACCTTCTGACGACTGGATGGAGTTTATTTGTGGGTGCAAAGAGGCTTAGAGCTGGTGATGCAGTTCTATTTATCAGGGATGAAAAATCGCAATTACTTGTCGGAATAAGGCGAGCCAATCGTCAGCAAACTACTTTACCATCTTCTGTTCTGTCTGCTGATAGCATGCATATCGGTGTACTTGCTGCTGCAGCTCATGCTGCTGCTAATCATAGCCCATTTACAATATTCTACAACCCAAGGGCAAGTCCTTCAGAGTTTGTGATTCCTGTGGCTAAGTATCGAAAGTCTGTATATGGAACTCAACTTTCTGTCGGTATGAGATTTGGAATGATGTTTGAAACTGAAGAATCCGGAAAGCGCAGATATATGGGCACATTGGTTGGTATTAGTGACTTGGATCCGTTGAGGTGGCCAGGTTCCAAGTGGCGAAATCTTCAGGTGGAATGGGATGAGCCTGGATGTTGCGATAAACAAAACCGACTCAGTTCGTGGGAAATTGAAACTCCAGAAAGTCTCTTTATTTTTCCTTCTTTAATGTCGGGTCTGAAACGACCATCACATAATGGATTTCTGGGTGAAACCGATTGGGGAAGTTTGGTTAAAAGACCTTTTCTACGGATGCCCGAAAATGGACATGAAAATTTTCCATGCGCTGTTTCGAGTTTATATTCTGAACAGATGATGAAGATGCTTGTGAGACCTCAACCTTTTAATCTCCCTAGACCTTCTCTACCTCAAGAATCAGTTTTCAAGGTTGACCAATTATTAAACGCGAGGACATTACAGCCTGTAATTAATCAAAAGACTCAGCTCATCTCTCAGGAAAGCATATCCCTTCAAAATCAAACTCATCCTTCATCTTGCCCTGCTCCATCTGAGGCCATAACTTCGAATTCATCACTGACATCTAATTTACCCGTAAAACTTGTTTCCCCATCCAGCCTAGGCAGTAAAATACAGGCTGTAGCTAATGGTGAGTGCACAAAGTTCAATTCTGAGCTCACAACAGATCAGTTTGTCCAGTTGACCTCGACTGGAGAGTGTCGAGAAGAAAAACTAAGTTCTGGCCATGACAATCTGCAGAGCTATGCTAATCATTTGCCATCTCTAATCCAGGGCCAGACTCCGTTGCAATTGCAAGCTAATGCTTGGCCTATCCAACCTCCAATGGAATCACTGATACACCATTCTCAGCCAATTGACATGCCTCAATATCATTGTTCTGGCCCAACTGCCTTGCCTCCATCTTTAGAGGGTGATGGATGTATAATTAACACCTCCTACCAACCTCTGTCGGGAGTGATTAGACCTCCAGGGCCTTTATCAATGGCAGGGTTGCCGGACCAATTTGAATCAATTAACTTTCCTTTACCATTGGTTGGCCATGAATCATGGGATAATCTAAGGTTCTTGTCCCATGCAAATCAAATGCCCTTATTCTCTCATCAAGACCCAGCTAGTTTGAATTGTGCAGCTAATTCAAATGGTTTGAGGGATTTGTCTGATGAAAGCAACAATCAAAGTGGGATATACAGCTGTCCTAATATTGATACTAGTAATGGTGGAAGCAGTGTGGTCGACCCATCTGTTTCAAGTGCCATTCTTGATGAATATTGCACTTTAAAGGATCCTGAGTTTCAAAACCCGTCAGATTGTTTGGTCGGGAATTTCGGGTCGACCCAGGATGTGCAGTCTCAGATCGCTTGTGCCAGCCTTGGAAATTCACAGGCTCTAACGCGTCAAAATATATCCGACAACTCCGGTGGAACGTCATCATGTAATCTAGATTTTGATGAAAGCAGCCTGTTACAGAGCAGCTCGTGGAAGCAAGTAGTTCCACCCATGAGAACTTACACAAAGTTTTATGATTCATTTTTTATTTTACAAAAAATAGGTAAGATTGCTTATGATGGATTGGAACCATCAAGTTCATCAGCGGCTGACCTTTCCATAATGAAACCAAGTGTTCATCTTCTTACATGTGGAACTGCATGGGCAATATCATTGACAATGCGAAGTTCAGTGAGTGAGGAGATGTTAAAAATATGCATTCCTGACTATTCTGAAGGAACGCATGATAATCTTCTTTATAGGTCATCACTTCATGGAAGAGGAATGAACCGATTCTGGTCTAATATTGAAGGTTACCAGGGTCCAATGCTTGTGTTGGTTTCTGCAACTTTAGAAGGTTCTGATGGGGGTTGTACAAATGGAAGGAAATGGACCATTGCTGCACTGGCACCCCAGGGTTTTGAGAATAGAGATCAGTTCTATGGTAGCTCAGGCAATCTCTATGCAATCAGTCCAGTTTTTTATGTATTTTCACCCTCTGGTAAGGAAAAAAACTTTGTATATAGCCACTTGCATCCTAGTGGAAGAGTGTATGAGCCACATCCAAAACCCGTCGGTATTGGTTTTGGAGGAACTATGCGAAGTGAAAGAATATTTATTGATGAAGATTTTGATAAAATTACCATTCGCCATCATGCGGTTGACAGAACTTACAGCCATGGTTCCCTTTTCCCGGATCAGGGCTTCCTACCTGTTGAAGCTTCTATTTCAGAAGTTGAGGCGTGGGGACTTGGTGGGAAAGGAGCCAAGAAAGTGCAAGATTCGTATAAGAAAAGAGAGGAGCTGTTTACGGAGCAGAGAAGAAAGGTGGACTTGAAAACATTTGCTAATTGGGAAGAATCACCTGAAAAGCTGATGATGGACATGGTGTCCGATCCCAACGCAGTTCGGAAAGACGATCGCTGA 3387 43.08 MDSAEAKVNAGGLVCGGQTNLLEEMKLLKEIQDQSVARRVINSELWHACAGPLVSLPQMGTLVYYFPQGHNEQVAVSTKRIATSQIPNYPNLSSQLMCQVQNITLHADKDTDEIYAQMSLQPVNSEKDVFPIPDFGLRPSKHPSEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDFTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGAKRLRAGDAVLFIRDEKSQLLVGIRRANRQQTTLPSSVLSADSMHIGVLAAAAHAAANHSPFTIFYNPRASPSEFVIPVAKYRKSVYGTQLSVGMRFGMMFETEESGKRRYMGTLVGISDLDPLRWPGSKWRNLQVEWDEPGCCDKQNRLSSWEIETPESLFIFPSLMSGLKRPSHNGFLGETDWGSLVKRPFLRMPENGHENFPCAVSSLYSEQMMKMLVRPQPFNLPRPSLPQESVFKVDQLLNARTLQPVINQKTQLISQESISLQNQTHPSSCPAPSEAITSNSSLTSNLPVKLVSPSSLGSKIQAVANGECTKFNSELTTDQFVQLTSTGECREEKLSSGHDNLQSYANHLPSLIQGQTPLQLQANAWPIQPPMESLIHHSQPIDMPQYHCSGPTALPPSLEGDGCIINTSYQPLSGVIRPPGPLSMAGLPDQFESINFPLPLVGHESWDNLRFLSHANQMPLFSHQDPASLNCAANSNGLRDLSDESNNQSGIYSCPNIDTSNGGSSVVDPSVSSAILDEYCTLKDPEFQNPSDCLVGNFGSTQDVQSQIACASLGNSQALTRQNISDNSGGTSSCNLDFDESSLLQSSSWKQVVPPMRTYTKFYDSFFILQKIGKIAYDGLEPSSSSAADLSIMKPSVHLLTCGTAWAISLTMRSSVSEEMLKICIPDYSEGTHDNLLYRSSLHGRGMNRFWSNIEGYQGPMLVLVSATLEGSDGGCTNGRKWTIAALAPQGFENRDQFYGSSGNLYAISPVFYVFSPSGKEKNFVYSHLHPSGRVYEPHPKPVGIGFGGTMRSERIFIDEDFDKITIRHHAVDRTYSHGSLFPDQGFLPVEASISEVEAWGLGGKGAKKVQDSYKKREELFTEQRRKVDLKTFANWEESPEKLMMDMVSDPNAVRKDDR 1128
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 55737023 55755070 - BLOR01589 Blo01g01589 56029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01589 1128 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 28 831 IPR044835 GO:0003677|GO:0006355|GO:0009725
Blo01g01589 1128 Pfam TLD 905 1072 IPR006571 -
Blo01g01589 1128 PANTHER AUXIN RESPONSE FACTOR 5 28 831 - -
Blo01g01589 1128 SMART B3_2 147 249 IPR003340 GO:0003677
Blo01g01589 1128 Pfam Auxin response factor 273 356 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Blo01g01589 1128 Pfam B3 DNA binding domain 147 248 IPR003340 GO:0003677
Blo01g01589 1128 CDD B3_DNA 146 247 IPR003340 GO:0003677
Blo01g01589 1128 Gene3D - 145 248 IPR015300 -
Blo01g01589 1128 ProSiteProfiles B3 DNA-binding domain profile. 147 249 IPR003340 GO:0003677
Blo01g01589 1128 ProSiteProfiles TLDc domain profile. 880 1072 IPR006571 -
Blo01g01589 1128 SUPERFAMILY DNA-binding pseudobarrel domain 134 276 IPR015300 -
Blo01g01589 1128 SMART 109ultra 882 1072 IPR006571 -
Blo01g01589 1128 Gene3D - 311 383 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01589 Blo-Chr1:55737023 Blo08g00438 Blo-Chr8:8805932 7.47E-160 dispersed
Blo17g00213 Blo-Chr17:2146704 Blo01g01589 Blo-Chr1:55737023 8.33E-54 dispersed
Blo09g00477 Blo-Chr9:15981043 Blo01g01589 Blo-Chr1:55737023 1.97E-06 transposed
Blo01g01589 Blo-Chr1:55737023 Blo12g00892 Blo-Chr12:27099990 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11941 PF07534 TLD 5.80E-21 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01589 K14486 - csv:101216825 1146.34