Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01591 ATGCGAGGTTCTTCGTCCAGCCTGACTCATTCTTCGATTAAGAGCTCGCTGATCGACCCAGATGGGGGAGCACTGGTGGATCTGGTGGTGCCGGAGAGCGAGCGAGCGGCGAGGTGTTTGGAGGCAGAGTCGCTGCCCAAGGTGAGGCTGACGAAGATCGATTTGGAATGGGTTCATGTTATTAGTGAAGGATGGGCGAGCCCATTGAAAGGGTTCATGAGGGAGGATGAGTATTTGCAGAGTTTGCATTTCAATTGCCTGAAAATGAAGGATGGTTCTTTGGTAAATATGTCGCTACCTATTGTCTTGTCAATCGACGATGTGGTTAAAGAGAAAATTGGATCATCACCGAATGTGGCGTTGATTGTGCCAAATGGAGACTTGGTTGCTATTCTTCGAAAAATTGAGATATTCAAGCATAACAAGGAAGAGAGAATTGCGAGAACTTGGGGAACTATTGCTACCGGATTACCGTATGTAGAGGAGGTCATTACACCTGCCGGAAATTGGCTCACTGGGGGAGATCTAGAAGTGTTAAAGCCTATCAAGTACAATGATGGGCTTGATCATTACAGGCTCTCTCCACAACAACTGAGGAAAGAATTCGATAGACGAGAAGCTGATGCTGTTTTTGCCTTTCAGCTTAGGAATCCGGTACATAATGGGCATGCTTTGCTTATGAACGATACCCGCCAACGGCTTTTGGATATGGGATATAAGAATCCAATTCTCTTGCTCCATCCTTTGGGAGGTTACACAAAGGCCGATGATGTGCCCTTAGACGTTCGAATGGAGCAACATAGCAAGGTACTCGAGGATGGAGTTCTTGACCCAGAAACAACCATAGTAGCCATATTTCCGTCACCCATGCATTATGCCGGTCCGACCGAAGTGCAATGGCATGCCAAGGCAAGGATCAATGCAGGGGCGAATTTCTATATCGTCGGCCGGGACCCTGCTGGAATGGGACACCCGACGGAGAAGAGAGATTTATACAACCCGGATCATGGGAAAAAGGTGTTGGCCTTGGCTCCTGGCCTTGAGAAGCTTAATATTTTGCCATTTAGAGTAGCAGCTTACGACACCGTAAAGAAGGAGATGGCATTTTTCGACCCTTCCCGTGCAAAGGAATTTCTCTTCATCTCTGGAACAAAGATGAGAAATTATGCGAGGACAGGAGAAAACCCCCCTGATGGTTTCATGTGTCCTGGTGGATGGAACGTCCTTGTCGAATATTACGAGCGGTTGCAGGCGGAAGAGTCTTCCCAGCTGCAGCCTGCCGCGCTGTCCACCTAG 1296 48.23 MRGSSSSLTHSSIKSSLIDPDGGALVDLVVPESERAARCLEAESLPKVRLTKIDLEWVHVISEGWASPLKGFMREDEYLQSLHFNCLKMKDGSLVNMSLPIVLSIDDVVKEKIGSSPNVALIVPNGDLVAILRKIEIFKHNKEERIARTWGTIATGLPYVEEVITPAGNWLTGGDLEVLKPIKYNDGLDHYRLSPQQLRKEFDRREADAVFAFQLRNPVHNGHALLMNDTRQRLLDMGYKNPILLLHPLGGYTKADDVPLDVRMEQHSKVLEDGVLDPETTIVAIFPSPMHYAGPTEVQWHAKARINAGANFYIVGRDPAGMGHPTEKRDLYNPDHGKKVLALAPGLEKLNILPFRVAAYDTVKKEMAFFDPSRAKEFLFISGTKMRNYARTGENPPDGFMCPGGWNVLVEYYERLQAEESSQLQPAALST 431
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 55792589 55794717 - BLOR01591 Blo01g01591 56031

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01591 431 PANTHER BIFUNCTIONAL 3'-PHOSPHOADENOSINE 5'-PHOSPHOSULFATE SYNTHASE 12 425 - -
Blo01g01591 431 PANTHER ENDOGLUCANASE 12 425 - -
Blo01g01591 431 SUPERFAMILY PUA domain-like 18 186 IPR015947 -
Blo01g01591 431 Gene3D HUPs 185 418 IPR014729 -
Blo01g01591 431 Pfam PUA-like domain 18 180 IPR025980 -
Blo01g01591 431 TIGRFAM sopT: sulfate adenylyltransferase 20 411 IPR002650 GO:0000103|GO:0004781
Blo01g01591 431 CDD ATPS 45 412 IPR002650 GO:0000103|GO:0004781
Blo01g01591 431 Gene3D Sulfate adenylyltransferase 16 184 - -
Blo01g01591 431 Pfam ATP-sulfurylase 190 412 IPR024951 GO:0004781
Blo01g01591 431 SUPERFAMILY Nucleotidylyl transferase 190 413 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01591 K13811 PAPSS; 3'-phosphoadenosine 5'-phosphosulfate synthase [EC:2.7.7.4 2.7.1.25] - zju:107435830 768.459
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01591 Blo-Chr1:55792589 Blo07g00236 Blo-Chr7:2970799 0 dispersed
Blo01g01591 Blo-Chr1:55792589 Blo02g00593 Blo-Chr2:11397055 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1086 Blo01g01591 . Bda01g00494 . Bpe02g00356 . . Bma01g02362 . . Cma01g01965 . Car01g01535 . . . . . . . . . . . . . . . . . . . . Cone17ag1393 Cone20ag0087 Lsi04g01731 Csa03g04268 Chy04g00427 . . . . . . . . . Sed01g2503 Cmo01g02023 . . . . . . Cpe02g00078 Bhi09g02099 Tan01g5005 Cmetu04g0401 . Hepe01g1625 Mch11g0129 . Cla05g01885 Cam05g2018 Cec05g2029 Cco05g2086 Clacu05g2009 Cmu05g1890 Cre05g2013 . . . Cme04g00480
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000781 5 3 3 2 3 3 4 3 3 3 2 3 4 3 3 4 3 4 4 3 3 3 3 3 3 2 3 3 3 2 93
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo01g01591 Blo_Chr01 FPKM 2.883581 2.882786 5.812396 6.380167 0.896224 0.816473 1.188599 2.370415 2.26865 1.964982