Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01598 ATGCCTTCGGAGGATTCCAAACCACTAAGGAAAGCTAAGGTTGAAGGAGTGGAAGGGGACGACGAAAAGGCCATCGGCTCTCTCATCAGAGATACTAAGAAGAAACCCTCAAATTCGAGTGCCAAATCTCACTTGAATCTGAAGAAGGAAGAAGTCCAGGACGATGGATTAGAAAGCGGACTGATAAATAAACTCGGTTCTCGTGCGAAGGGTTCTAAAACTAAGAAAGAAGAGATTAGTGACGACGACGAAGACGACAAGCCAATCATCAAAAGGAGCTCCGTGAAGATTGAAAAGGTACAGGTAAAAACGAGAGTTGAGCAGGGCGGAAATGTCTGTAAAGCAACTAAAACGAAGCAAGAGGTGATAAAAGAGAAGAAGGCAAAGAAAATATATGATATGCCTGGTCAGAAACGAGATCCTCCAGAAGAGAGAGACCCATTGAGGATCTTTTACGAAACCCTTCATAAGCAGCTTCCACACAGTGAAATGGCACAGATTTGGATGATGGAATCAGGGCTATTATCCAAAGAAGAGGCCAAAAAGGTGTTTGAAAAGAAACAGCAGAAGCAAAAGCTGAATTCCCCCATTGCAGCTAGGAGTGTCACCAAGAAGGAAGTCAAGTCTGTAACCGTGAAGAAAAAGATTCTATCTTCACCCGTTTCTTCGGATAAAAAGACGAAAACTATCTCCAAAGTCGCCGTCAAAGTGACCAAGAAGCGGAAACTCGGAGGCGAAAGCTCTGAGGAAGGCTCGGACTATGAAGATTACGAGAATAGCACGAGTAAGAAGAAGAAGCATAGAGCAGCTTAG 813 43.91 MPSEDSKPLRKAKVEGVEGDDEKAIGSLIRDTKKKPSNSSAKSHLNLKKEEVQDDGLESGLINKLGSRAKGSKTKKEEISDDDEDDKPIIKRSSVKIEKVQVKTRVEQGGNVCKATKTKQEVIKEKKAKKIYDMPGQKRDPPEERDPLRIFYETLHKQLPHSEMAQIWMMESGLLSKEEAKKVFEKKQQKQKLNSPIAARSVTKKEVKSVTVKKKILSSPVSSDKKTKTISKVAVKVTKKRKLGGESSEEGSDYEDYENSTSKKKKHRAA 270
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 55841924 55844340 + BLOR01598 Blo01g01598 56038

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01598 270 PANTHER NUCLEOLIN 1 269 - -
Blo01g01598 270 MobiDBLite consensus disorder prediction 1 57 - -
Blo01g01598 270 MobiDBLite consensus disorder prediction 70 90 - -
Blo01g01598 270 PANTHER OS05G0596200 PROTEIN 1 269 - -
Blo01g01598 270 MobiDBLite consensus disorder prediction 1 90 - -
Blo01g01598 270 MobiDBLite consensus disorder prediction 218 270 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01598 - - - bhj:120085300 218.394
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01598 Blo-Chr1:55841924 Blo18g00082 Blo-Chr18:696053 5.06E-28 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1113 Blo01g01598 . Bda01g00484 . Bpe02g00348 . . . . . Cma01g01975 . . . . . . . . . . . . . . . . . . . . . . Cone17ag1406 Cone20ag0077 . Csa03g04284 Chy04g00413 . . . . . . . . . Sed01g2479 Cmo01g02033 . . . . . . Cpe02g00068 Bhi09g02083 Tan01g5022 Cmetu04g1253 . Hepe01g1611 Mch11g0113 . Cla05g01866 Cam05g1995 Cec05g2007 Cco05g2065 Clacu05g1987 Cmu05g1868 Cre05g1992 . . . Cme04g00464
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0012373 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 0 1 1 1 1 29
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo01g01598 Blo_Chr01 FPKM 51.55547 47.965965 47.52216 49.32983 39.706181 37.829895 40.175137 36.503628 41.111435 49.72628