Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01615 ATGGCAAGGCTACTGTGTTTCTTCACGATGAATTACGTTTCTCAAGCCCCTTACGATTACCCAGCTCTCTTCAGCCACTGGAAGTCCGGCGAGGATGATTCTGTTGGCTTCTGCGATCTTTCTGGGGAAAAATTTTTCCGTAATGATCTTGAAGATAATCTGCGTGGAAAGACTGTTTGTGGGTCTTCTTTCGGTTGGTTGAAATTGGCTGATGAAGGTGATTCTCATACTCTAAGCTTGCTTAATCCTCTCACCCGAGACATCATTCAACTCGGACACATCCCAGCCTCGTTTGACGAAGAAGACGAGAGCATCGCCACTGACACCCCAAACCCGAATGATAACACATTCATTGTTTATAAAGCCGTACTCAATTCTGACCCAAATATTAACCCTCTTCGATATGTTGTTCTGGCTATCTACGGCAAGGAGAAGAAATTAATCTACTACAATTCGCCCCATTCCTCTTGGACAATGCTGAAGGACGGAGGAAGTTGCTTCGATGATATGATCTCAGAGAAAGAAGGGTTTTACGCCATCGACGAGTTCGGAAAGATTGTGCTCTGCAATCTCAACTTTTATCCAGTCGTCAGATTTTCACCCTCCGTCAAAGAAATTTATTTGCCGTGGTTCTTTAAGGGCAACAAGGTCTATCTCGTCCAAATCGAAGGACTGCTGTACACTATCATCAGATTTCTTCAGAGTAATCCAAAGGTGGGATACGAAACGTATTCTTTCGAAGTCTACGCCTATGATTCATCAATCGAAAAGTGGCTGCGAGTAGAATCCATCGGAAACATGGCTATTTTCTTGGGGATCAATCACTCAGTTTGTCTCCCAGTGAACCCCTGCAATTCTGAAAAGATGAAGCCAAACAGTATTTACTTCACCGACGATCAGGTGGAGAGTCGGGGCAGAAGGGGAATCGTCGGCCTGGACAGCGGAGTTTACGACCTGAAAGATTTCAATCCGGAAGGGGTGGGAGTGATGCCGACTAGGTACGAGGGTTTGGAGCCATGGGCAGTCTGGTACGACCGAAAACCTATCAACGCCTTGCAGGGTTCTAGGTCAGAGGGAGTGTCTTCGCAAGAGAGGGAGGCCGAGAAGGAGCTCGGTATTCCGAGCGAACAGGCGACTGGCAAGCTCCGACAGCTTCTGTTCGGGAGCATTTCGAGCAGACGACGAGCGAACGTTCGGTCGTCGGTGGCTGCGAGCGATCGAACGCAGGGGATGTCGAACGTGGACAGCGACAGGACCGCAACTGGGAGCCGTTCCGAAGAGGCAGCGCGGTCTGGACGGCAGGGCAAAATTGAGGAACGTCCTCCTCTGTCTCCTGATTTCGGCTCAGACGAGTTTGTGGATTTCGAGCTAGTACCTGAGGTTGTTGCTCCTTCGTATAAGAGGAAGGACTGTCAAAGAGTTCAAGCAAATCTTTCGTCCTCCATAGCAAGCCTACTCTGTTTCTTCACGATGAATTACGTTTCTCAAGCCCCCTACAATTACCCTTTTCTCTTCTGCCACTGGAAGTCCGGCGAGGATGATTCTGTTGGCTTCTGCGATCTTTCTGGGGAAAATTTTTGCCGTAATAATCTCGAAGATAATCTGCGAGGAAAGATTGTTTGTGGGTCTTCTTTCGGTTGGTTGATCTTGGCTGATGAAGGTGATTCTCCTACTCTAAGCTTGCTTGATCCTCTCACCCGAGCCATCATTCAACTCGGACCCATCCCAGCCTCGTTTGACGAAGAAGACGAGAGCATCGCCATTGATACCCCAAACCCTAATGATAACACGCGCATTGTTTATAAAGCCGTACTCAATTCTGACCCAAAGATTAACCCTCTTCGATATGTTGTTCTGGCTATCTACGGAAAGAAGAAGCAATTAATCTACTACAAACCGGCCCATTCTTCTTGGACAATGCTGAAGGACGGAGGAAGTTACTTCGATGATATAATATCAGAGAAAGAAGGGTTTTACGCTATCGACGAGTTCGGAAAGATTGTGCTCTGCAATCTCAACTTTTCTCCAGTCGTCGGATTTTCACCCTCCGTCAAAGAAATTTCTTTGCCGTGGTTCTTTAAGGGCGACAAGGTCTATCTCGTCCGAATCGGAGGACTGCTGTGCACTGTCATCAGATTTTTGCAGAGTAATCCAAAGGTGGGATACGAAACGTATTCTTTCGAAGTCTACACCTATGATTCATCAATCGAAAAGTGGCTGCGAGTAGGATCCATCGGAAACATGGCTATTTTCTTGGGGATCAATCACTCAGTTTGTCTCCCAGTCAACCCCAACAATTCTAAAAAGATGAAGCCAAACAGTATTTACTTCACCGACGATCAGGTGGAGATGCAGGGCAGAAGGGGAATCGTCGGCCTGGACAGCGGAGTTTACGACCTGAAAGATTTCAACCCGGAAGGGGAGGGAGGAATGCCAACTAGGTACGAGGATTTGGACCCATGGGCAGTCTGGTACGAGCCGATAAGCTATCAATGCCTTGCAAGGTTCAGACCGCCTCGTAGATTAGAATGTCACCGCCGGCGAGGAGCAAAGGCTGGAATGGGTCACCGGAGAAGCATTATCCTCCACCATTTGCCTCCCATGAAGAGGATTCCTGTGATTGGGGGGAAGGAGCTAGACCTGCATGTGTTATATTTGGAGGTAGTTGCAGAGAAAAAATGGAGGGAAGTGGGCAATATATTTAAATTCTCCCCTACAACAACAAGTGCTTCTTTTGTGTTGAGGAAACACTACTTCAGTCTTCTCTACCATTATGAACAGGTTTACTTCTTCGAGAGACAAGGCGTTCTGACTACTCCAAGAGGTTCCTCTTTCCACCCTAATACCCATTCAGCTGCATTCGCTTTTAGTGACCCTTCGTGCAGAAATGAGTTGGCCATTGTTGAGTACACTCCAAAGAAGACGAATTCGCCTGAACCAACTGCAGAAGATGGACCATGCTTGTCAGTTATTGGAACAATTGAAGGGAAGTTCGACTGTGGTTATTTTGTGTCTGCAAAAGTGGGTTCAGAGATTCTCAGAGGAGTGCTTTACCATCCAGAAGAGCCGTCTATGTTATCACCGCCCTCATTTCCACATGTCAACAATGTACAAGCGCTAGTTCCTTACAAATATGGCAGACAGTGCCATTCCGGTGGCCGGAGAAGGAAGAGGAGCCGGAGAAAGGGAGATCCAAACTACCCAAAACCTAACAGAAGTGGGTATAACTTCTTTTTCGCAGAAAAACATTACAAACTCAAGTCTCTGTATCCAAATAGAGAGAGGGAGTTTACAAAGATGATAGGAGAGTCTTGGAGCAATCTCAGCCCTGAAGAGAGAATGGTTTACCAAAACATAGGGTTGAAAGACAAGGAAAGATACAAGAGGGAATTGAAAGAGTACAAAGAGAAATTGAGGCTGACACTGGGAGTTAATGAATGA 3441 46.85 MARLLCFFTMNYVSQAPYDYPALFSHWKSGEDDSVGFCDLSGEKFFRNDLEDNLRGKTVCGSSFGWLKLADEGDSHTLSLLNPLTRDIIQLGHIPASFDEEDESIATDTPNPNDNTFIVYKAVLNSDPNINPLRYVVLAIYGKEKKLIYYNSPHSSWTMLKDGGSCFDDMISEKEGFYAIDEFGKIVLCNLNFYPVVRFSPSVKEIYLPWFFKGNKVYLVQIEGLLYTIIRFLQSNPKVGYETYSFEVYAYDSSIEKWLRVESIGNMAIFLGINHSVCLPVNPCNSEKMKPNSIYFTDDQVESRGRRGIVGLDSGVYDLKDFNPEGVGVMPTRYEGLEPWAVWYDRKPINALQGSRSEGVSSQEREAEKELGIPSEQATGKLRQLLFGSISSRRRANVRSSVAASDRTQGMSNVDSDRTATGSRSEEAARSGRQGKIEERPPLSPDFGSDEFVDFELVPEVVAPSYKRKDCQRVQANLSSSIASLLCFFTMNYVSQAPYNYPFLFCHWKSGEDDSVGFCDLSGENFCRNNLEDNLRGKIVCGSSFGWLILADEGDSPTLSLLDPLTRAIIQLGPIPASFDEEDESIAIDTPNPNDNTRIVYKAVLNSDPKINPLRYVVLAIYGKKKQLIYYKPAHSSWTMLKDGGSYFDDIISEKEGFYAIDEFGKIVLCNLNFSPVVGFSPSVKEISLPWFFKGDKVYLVRIGGLLCTVIRFLQSNPKVGYETYSFEVYTYDSSIEKWLRVGSIGNMAIFLGINHSVCLPVNPNNSKKMKPNSIYFTDDQVEMQGRRGIVGLDSGVYDLKDFNPEGEGGMPTRYEDLDPWAVWYEPISYQCLARFRPPRRLECHRRRGAKAGMGHRRSIILHHLPPMKRIPVIGGKELDLHVLYLEVVAEKKWREVGNIFKFSPTTTSASFVLRKHYFSLLYHYEQVYFFERQGVLTTPRGSSFHPNTHSAAFAFSDPSCRNELAIVEYTPKKTNSPEPTAEDGPCLSVIGTIEGKFDCGYFVSAKVGSEILRGVLYHPEEPSMLSPPSFPHVNNVQALVPYKYGRQCHSGGRRRKRSRRKGDPNYPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWSNLSPEERMVYQNIGLKDKERYKRELKEYKEKLRLTLGVNE 1146
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 56045650 56056942 - BLOR01615 Blo01g01615 56055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01615 1146 MobiDBLite consensus disorder prediction 398 419 - -
Blo01g01615 1146 Pfam ARID/BRIGHT DNA binding domain 867 926 IPR001606 GO:0003677
Blo01g01615 1146 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 1068 1135 IPR009071 -
Blo01g01615 1146 MobiDBLite consensus disorder prediction 420 445 - -
Blo01g01615 1146 SMART bright_3 851 931 IPR001606 GO:0003677
Blo01g01615 1146 MobiDBLite consensus disorder prediction 1049 1071 - -
Blo01g01615 1146 PANTHER HIGH MOBILITY GROUP B PROTEIN 9 870 1141 - -
Blo01g01615 1146 PANTHER HIGH MOBILITY GROUP B PROTEIN 9 870 1141 - -
Blo01g01615 1146 MobiDBLite consensus disorder prediction 353 375 - -
Blo01g01615 1146 SMART hmgende2 1067 1136 IPR009071 -
Blo01g01615 1146 CDD HMGB-UBF_HMG-box 1068 1132 - -
Blo01g01615 1146 SMART ARID_2 834 926 - -
Blo01g01615 1146 Pfam HMG (high mobility group) box 1068 1135 IPR009071 -
Blo01g01615 1146 SUPERFAMILY ARID-like 867 939 IPR036431 GO:0003677
Blo01g01615 1146 MobiDBLite consensus disorder prediction 1049 1063 - -
Blo01g01615 1146 MobiDBLite consensus disorder prediction 398 448 - -
Blo01g01615 1146 Coils Coil 1124 1144 - -
Blo01g01615 1146 Pfam Protein of unknown function (DUF295) 741 800 IPR005174 -
Blo01g01615 1146 Pfam Protein of unknown function (DUF295) 260 319 IPR005174 -
Blo01g01615 1146 Gene3D - 861 937 IPR036431 GO:0003677
Blo01g01615 1146 SUPERFAMILY HMG-box 1065 1137 IPR036910 -
Blo01g01615 1146 Gene3D High mobility group box domain 1052 1141 IPR036910 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00329 Blo-Chr1:3990205 Blo01g01615 Blo-Chr1:56045650 1.96E-63 dispersed
Blo01g01615 Blo-Chr1:56045650 Blo03g00216 Blo-Chr3:4920483 9.70E-17 dispersed
Blo01g01615 Blo-Chr1:56045650 Blo10g00890 Blo-Chr10:27877630 3.99E-41 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11942 PF00505 HMG_box 4.70E-11 CL0114 Blo TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01615 - - mcha:111011470 351.673