Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01619 ATGGGTTGTTGTGGATCAGTCTTTCTGAAGGACTCTCACCCGGAAGAGAAGAAGCGCGGCCTCTTCCACCGCCACCACTCTCAGAACAACGACCCGTCGCAGCCCAATAACGGAGCTAATTCTGAACCCGTCATCGCCGTTAATGGAGGCGTGCCGGCTTTTACAGAGTTTTCTTTCGCGGACCTTAAGACCGCGACGAACAACTTCAGCTCTGAGTTCATCGTCTCCGAGAGCGGTGAGAAGGCCCCCAATGTCGTATACAAGGGCCGCCTCCAAAACCAGAATAATTGCCGGTGGATCGCTGTTAAGAAATTCACTAAATTAGCTTGGCCAGACCCCAAGCAGTTCGCCGAAGAAGCTTGGGGTGTTGGGGAATTGAGGCATAAAAGGCTGGCTAATTTGATTGGTTATTGCTGTGACGCTGATGAAAGACTGCTTGTTGCAGAATACATGCCCCATGACACCCTTGCTAAGCATTTATTCCACTGGGAAAATCAAACCATGGAATGGGCAATGCGGTTAAGAGTTGCTCTGTACATTGCTGAAGCTCTAGACTATTGCAGTCAAGGAGGGCGTTCACTTTACCACGACTTGAACGCATATAGAGTTATCTTTGACGAGAATGGCGATCCTCGGCTATCGTGTTTTGGATTGATGAGAAACAGCAGGGATGGAAAAAGCTACAGCACTAATCTTGCTTATTCTCCTCCAGAATATTTAAAAAATGGAAGGGTGACACCAGAAAGTGTGATCTTCAGTTTTGGGACTATTTTATTGGATCTCCTCAGTGGAAAACACATCCCTCCTAGTCATGAGAACATCTTTGCTTTTGTTTCCTTGATTGGAGGCACCAGAGACAACGTGGAAAGAAATTATTCATTTTTAAAAGGGTCTCTAGGCATCTGCGTTTGTATGGTTCCGTCTTATGCTATGCTGCGAATTCCAAAGCAGGAAGAAGCTCCTCCAATGACACAACAACAGCCACAACCTCTCTCCCAAATGGGCGATGCTTGTGCCCGAATGGACCTCACAGCTATCCATCAGATTCTAGTAATGACTCACTACAAAGATGACGAAGGAACCAATGAGCTATCTTTCCAAGAATGGACTCAGCAAATGAAGGATATGTTGGAAGCAAGAAAGCGAGGCGATATAGCATTTCGCGATCGAGACTTTAAAACCGCAATTGGTAATTATTCGCAGATCTGCAGGGAGTGTTTCTTCGAGGTGTTGGAAGATGAGATTCATCAGGTGATTATGGAGAACCATTTGTTTAAGCCTGGTGAGCGCATTGCTATTGGTGCATCTGGCGGGAAAGATTCTACTGTTCTTGCTTATATATTATCTGAATTGAATCGACGTCACAATTATGGGTTGGATCTCTTCCTCTTATCAGTGGATGAGGGCATTACAGGATACAGGGACGATTCTCTTGAAACTGTAAAAAGAAATGAAATTCAGGTGAATAGCATTTTTGTTTATGATTCTTGCTCTTATTTCTGTCAGTATGGACTGCCTTTGAAAATCTTATCATACAAGGATCTGTATGGATGGACAATGGATGAAATAGTGAAGGTGATAGGTTTAAAGAATAATTGCACTTTCTGTGGGGTTTTTCGTCGCCAGGTCTGTTTTAATACACGAACATATTGTGAAATTGATTGGTTATTTACGGCCATAAGGTTAAATTCTCTAGAAATTGGGAAATTTTTTTCTTGGTTTGAAGTAGTAAATAAGTGTCAGGAATTTCATTCCAAAAAATGTTGCATGAATTTTCGTATCAATTTTCGTCTGGAAATTTTTAATGCTTATCTGCATACTCATTCTGATTGTTGTGTGCTTAAATCACAAAACCTTAACAAACAATATACGTATGCTTATTTTAAGAAGCTAGACTACTTCTCTACTGAGTGTATTTATTCCCCAAATGCATATCGTGGTTTTGCTCGGGAATTCATCAAGGACTTGGAAAGAATCAGACCTATGGCTATACTTGACATCATTCGATCAGGGGAAAATTTTAGAATATCCACTTCTACAAAAATGCCTGAGCAGGGTACATGTGAACGGTGTGGCTACATTTCAAGCCAGGGGATTCTCATCAATGGCCAATTCCCAGGCCCAGACATTTTCTCTGTTACAAATGATAATATCATTATCAATGTCTTCAACAGCTTGGACGAGCCTTTTCTCCTCTCCTGGAATGGCATTCAGCAGAGGAGGAATTCGTACGAAGATGGAGTTTTGGGAACTACGTGCCCCATTCCTCCGGGAAAGAACTTCACCTACATTCTCCAAATGAAGGATCAGATCGGAAGCTTTTATTACTTTCCCTCTCTTGGTTTCCACAAGGCCGCCGGTGGTTTCGGAGGTATCAGAATTCTGAGTCGGCCTCTGATTCCTGTCCCTTTTCCTGATCCCGCCGCCGATTATACAGTCCTCATTGGTGACTGGTATAAGACTAATCATACGGCCTTGAGGGCTCAACTGGATCGTGGTAAGAAACTTCCGTTTCCTGATGGAATCCTCATCAATGGCCGCGGCCCTAATGGCACCTCCTTTTATGTTGAACAAGGAAAAACTTACAGGCTGAGAATATCAAACGTGGGGCTACAAAATTCGCTCAATTTCAGAATTGAAGGACACAAAATGAAATTGGTGGAGGTGGAGGGCACTCACACCATGCAGACCATTTTCTCCTCTCTGGACGTTCACGTGGGCCAGTCTTATTCCGTCCTGGTGACGGCGGACCAGCCGGCTCGGAGCTATTTCGTTGTGGTTTCCACTCGATTCACCTCTACAGTCCTGACCACCACCGGCTTTCTTCGTTACAGCAATTCTGCGAGCCCTCCTCAAGGCCCACTTCCCGGTGGCCCCACAATCCAAGTCGAGTGGTCCCTCAATCAAGCACGTGCCATTAGAATGTTTGTACGTTGGTTTGATTTGCACTGTCTTTTTAGGACCAATCTTACAGCGAGTGGACCGAGGCCGAACCCTCAAGGGTCCTACCACTACGGTCTTATCAACACAACGAGAACCATCATCCTAGCCAACTCGGCCGGCCTCGTCAGTGGCAAGCAAAGGTATGCAGTTAACAGCGTGTCCTTCGTCCCCGCTGATACTCCATTGAAGATCGCTGATTTCTTCAAAATCGGAGGAGTCTTTCGCGTCGGAAGCATTTCCGATAGGCCCACTGGCGGTGGCATCTACCTTGACACATCCGTTTTGGGTGCGGATTATAGAGTGTTTATTGAGATTGTATTTCAAAACACGGAGAACATAATTCAAAGTTGGCACCTTAGTGGATACTCTTTCTTCGTCGTGGGCATGGATGGAGGCCAATGGAACAGCACTAGCAGAGATCAGTACAATCTCCGAGATGCGGTTGCGCGATGCACAGTTCAGGTATATCCACAGTCATGGACGGCGATATACGTATCGCTGGACAACGTAGGGATGTGGAACTTACGGTCGGAGTTCTGGGCGAGACAATACCTCGGCCAACAACTCTACTTGCGGGTTTATACGCCGTCCACTTCCCTCAGGGATGAGTACCCTATTCCAAAGAACGCTCTTCTCTGCGGCAGAGCCGCCGGCAGAAGAACTCGTCCTCTCTAA 3618 45.47 MGCCGSVFLKDSHPEEKKRGLFHRHHSQNNDPSQPNNGANSEPVIAVNGGVPAFTEFSFADLKTATNNFSSEFIVSESGEKAPNVVYKGRLQNQNNCRWIAVKKFTKLAWPDPKQFAEEAWGVGELRHKRLANLIGYCCDADERLLVAEYMPHDTLAKHLFHWENQTMEWAMRLRVALYIAEALDYCSQGGRSLYHDLNAYRVIFDENGDPRLSCFGLMRNSRDGKSYSTNLAYSPPEYLKNGRVTPESVIFSFGTILLDLLSGKHIPPSHENIFAFVSLIGGTRDNVERNYSFLKGSLGICVCMVPSYAMLRIPKQEEAPPMTQQQPQPLSQMGDACARMDLTAIHQILVMTHYKDDEGTNELSFQEWTQQMKDMLEARKRGDIAFRDRDFKTAIGNYSQICRECFFEVLEDEIHQVIMENHLFKPGERIAIGASGGKDSTVLAYILSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQVNSIFVYDSCSYFCQYGLPLKILSYKDLYGWTMDEIVKVIGLKNNCTFCGVFRRQVCFNTRTYCEIDWLFTAIRLNSLEIGKFFSWFEVVNKCQEFHSKKCCMNFRINFRLEIFNAYLHTHSDCCVLKSQNLNKQYTYAYFKKLDYFSTECIYSPNAYRGFAREFIKDLERIRPMAILDIIRSGENFRISTSTKMPEQGTCERCGYISSQGILINGQFPGPDIFSVTNDNIIINVFNSLDEPFLLSWNGIQQRRNSYEDGVLGTTCPIPPGKNFTYILQMKDQIGSFYYFPSLGFHKAAGGFGGIRILSRPLIPVPFPDPAADYTVLIGDWYKTNHTALRAQLDRGKKLPFPDGILINGRGPNGTSFYVEQGKTYRLRISNVGLQNSLNFRIEGHKMKLVEVEGTHTMQTIFSSLDVHVGQSYSVLVTADQPARSYFVVVSTRFTSTVLTTTGFLRYSNSASPPQGPLPGGPTIQVEWSLNQARAIRMFVRWFDLHCLFRTNLTASGPRPNPQGSYHYGLINTTRTIILANSAGLVSGKQRYAVNSVSFVPADTPLKIADFFKIGGVFRVGSISDRPTGGGIYLDTSVLGADYRVFIEIVFQNTENIIQSWHLSGYSFFVVGMDGGQWNSTSRDQYNLRDAVARCTVQVYPQSWTAIYVSLDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYPIPKNALLCGRAAGRRTRPL 1205
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 56096377 56110286 - BLOR01619 Blo01g01619 56059

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01619 1205 CDD CuRO_3_AAO_like_1 1038 1159 IPR034275 GO:0005507
Blo01g01619 1205 CDD CuRO_2_AAO_like_1 809 944 IPR034271 -
Blo01g01619 1205 SUPERFAMILY Cupredoxins 1007 1196 IPR008972 -
Blo01g01619 1205 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 405 660 - -
Blo01g01619 1205 PANTHER MULTI-COPPER OXIDASE 695 1198 IPR045087 -
Blo01g01619 1205 SUPERFAMILY Cupredoxins 695 824 IPR008972 -
Blo01g01619 1205 Gene3D Transferase(Phosphotransferase) domain 1 152 358 - -
Blo01g01619 1205 ProSiteProfiles Protein kinase domain profile. 72 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo01g01619 1205 Pfam Multicopper oxidase 810 946 IPR001117 -
Blo01g01619 1205 SUPERFAMILY Protein kinase-like (PK-like) 54 292 IPR011009 -
Blo01g01619 1205 CDD Alpha_ANH_like_II 430 644 - -
Blo01g01619 1205 Gene3D HUPs 393 565 IPR014729 -
Blo01g01619 1205 Pfam Multicopper oxidase 1066 1177 IPR011706 GO:0005507|GO:0016491
Blo01g01619 1205 Pfam Protein tyrosine and serine/threonine kinase 85 266 IPR001245 GO:0004672|GO:0006468
Blo01g01619 1205 SUPERFAMILY Cupredoxins 804 971 IPR008972 -
Blo01g01619 1205 Gene3D - 668 795 IPR008972 -
Blo01g01619 1205 MobiDBLite consensus disorder prediction 19 44 - -
Blo01g01619 1205 PANTHER OSJNBA0084K11.18 PROTEIN 695 1198 - -
Blo01g01619 1205 MobiDBLite consensus disorder prediction 27 43 - -
Blo01g01619 1205 Gene3D - 1006 1201 IPR008972 -
Blo01g01619 1205 Gene3D Phosphorylase Kinase; domain 1 47 150 - -
Blo01g01619 1205 Pfam Multicopper oxidase 686 797 IPR011707 GO:0005507
Blo01g01619 1205 Gene3D - 808 977 IPR008972 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01619 - - - csv:101215694 883.248
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo01g01619 Blo18g00757 CCT
Blo01g01619 Blo17g00723 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01000 Blo-Chr1:28995509 Blo01g01619 Blo-Chr1:56096377 0 dispersed
Blo01g01619 Blo-Chr1:56096377 Blo04g00593 Blo-Chr4:5098059 0 dispersed
Blo15g00400 Blo-Chr15:5698955 Blo01g01619 Blo-Chr1:56096377 1.52E-126 dispersed
Blo19g00319 Blo-Chr19:20595926 Blo01g01619 Blo-Chr1:56096377 3.03E-73 dispersed
Blo01g01619 Blo-Chr1:56096377 Blo17g00723 Blo-Chr17:21645693 0 wgd
Blo01g01619 Blo-Chr1:56096377 Blo18g00757 Blo-Chr18:20906782 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g137 Blo01g01619 . . . Bpe02g00325 . . Bma01g02394 Cmo05g00336 . Cma01g01997 Cma09g00072 Car01g01569 . . . . Bhi04g00090 . . . Hepe10g0675 . . Cla08g01388 Cam08g1861 Cec08g1440 Cco08g1572 Clacu08g1555 . Cre08g1339 . Cone7ag1919 Cone17ag1436 Cone20ag0046 Lsi04g01790 Csa04g02681 . Cme03g01548 Blo17g00723 Blo18g00757 Bda08g01183 . . Bpe05g00167 Bma01g00712 . Sed03g1664 Cmo01g02058 Cmo09g00073 . Cma05g00335 Car05g00279 . . . Bhi09g02935 Tan01g5072 . . Hepe01g2318 Mch11g0074 . Cla05g01582 Cam05g1690 Cec05g1693 Cco05g1740 Clacu05g1679 Cmu05g1570 Cre05g1687 Lsi08g01278 . Chy07g00372 Cme07g00076
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000048 7 10 7 9 7 11 7 11 13 11 8 10 14 9 12 16 10 16 4 10 12 10 16 10 14 12 11 19 23 4 333
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84118 PF07714 PK_Tyr_Ser-Thr 4.90E-21 CL0016 Blo PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo01g01619 Blo_Chr01 FPKM 0.0 0.0 0.0 0.0 0.844619 0.0 1.006939 0.0 0.0 0.0