Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01635 ATGGCCGGATCAGACGAAAATAATGGCCGTGATGTGATTGGACTCTCAAATCTTCAAGGGAGCTTAGTTGGTGGAGGCAACAAAGTGATGGCAGAGATTGGCCAGAACCGTAGAGCTTTGAGCAGCATTGATCACAATATAATAAGAGCCCATCCTTATCCCTCGGCACTTCAGAAAAGAGGCTTGACAGAAGAAAATGTTTTCAACAAGGATGGACCGCCCATTCCGGTTCATCGGCCTATTACCAGGAAGTTTGCAGCGCAGATGGCTAACAAGAAGCAACTGGGGCCGGCGGTAACCGAGATTCCAGCCCAGTTGGAGCAACCTTCAAAAGAGTCTGAAGATTGTACCATTGAAGATGCAGAGGATAGTGACTTTCCAGTCCCAATGTTTGTGCAACACACAGAAGCAATGTTGGAGGAAATTGATAGGATGGAGGAAGTTGAAATGAAAGATATAAACGAGGATCCCGTCGAGGATATAGACAGCTGCGATAAGAACAATTCACTGGCTGTTGTGGAGTACTTAGAAGATTTATTTGGCTATTATAGGAATGCTGAGATTTCAAACTGTGTTTCACCAGATTACATGGCTCAGCAATCGGATATTAATGAAAGAATGAGAGGTATTCTCGTTGATTGGCTGATTGAGGTTCATTACAAGTTTGAGCTGATGGATGAGACCTTGTATCTTACCGTCAACCTTATTGATAGATTTTTAAGTCTTCAACCAGTGGTGAGGAAGAAACTCCAGTTGGTAGGGGTGACAGCCATGCTTCTTGCTTGCAAATATGAAGAAGTTTCAGTTCCAATCGTGGACGATCTTATTCTGATATCTGACAAGGCTTACTGCAGAAAAGAAGTGCTTGAAATGGAAAAATTAATGGTCAATACCTTACAGTTTCATATGTCTGTTCCTACTCCATATGTGTTTATGAGGAGATTTCTCAAAGCTTCTCAATCTCACCAAAAGCTTGAGCTACTCTCATTCTTCATGGTCGAGCTTTGCCTAGTCGAGTATGAAATGCTCAAGTTTCATCCTTCTCTGTTATCTGCGGCTGCAATCTTCACAGCGCAGTGTTCTTTAAATGGGTTCCAGCAATGGAGCAAGACAAGTGAATGGTACACTGGCTATTCAGAAGAGCAGCTTCATGAATGCTCAATGAAGATGGTTGCTTTCCATCAGAAAGCTGGAACAGGAAAGCTAACTGGAGTTCACCGGAAGTACAGTACAGCCAAGTTTGGATATGCTGCCAGAATTGAGCCGGCCAACTTTCTATTAGAGGAAAGATTCTAA 1296 42.98 MAGSDENNGRDVIGLSNLQGSLVGGGNKVMAEIGQNRRALSSIDHNIIRAHPYPSALQKRGLTEENVFNKDGPPIPVHRPITRKFAAQMANKKQLGPAVTEIPAQLEQPSKESEDCTIEDAEDSDFPVPMFVQHTEAMLEEIDRMEEVEMKDINEDPVEDIDSCDKNNSLAVVEYLEDLFGYYRNAEISNCVSPDYMAQQSDINERMRGILVDWLIEVHYKFELMDETLYLTVNLIDRFLSLQPVVRKKLQLVGVTAMLLACKYEEVSVPIVDDLILISDKAYCRKEVLEMEKLMVNTLQFHMSVPTPYVFMRRFLKASQSHQKLELLSFFMVELCLVEYEMLKFHPSLLSAAAIFTAQCSLNGFQQWSKTSEWYTGYSEEQLHECSMKMVAFHQKAGTGKLTGVHRKYSTAKFGYAARIEPANFLLEERF 431
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 56180721 56183333 - BLOR01635 Blo01g01635 56075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01635 431 CDD CYCLIN 207 296 IPR013763 -
Blo01g01635 431 ProSitePatterns Cyclins signature. 208 239 IPR006671 -
Blo01g01635 431 CDD CYCLIN 304 391 IPR013763 -
Blo01g01635 431 Gene3D - 192 304 - -
Blo01g01635 431 SMART cyclin_7 213 297 IPR013763 -
Blo01g01635 431 SMART cyclin_7 310 392 IPR013763 -
Blo01g01635 431 Pfam Cyclin, C-terminal domain 306 421 IPR004367 -
Blo01g01635 431 PANTHER CYCLINS 25 424 IPR039361 -
Blo01g01635 431 PIRSF Cyclin_A_B_D_E 16 431 IPR039361 -
Blo01g01635 431 PANTHER CYCLIN-B2-3-RELATED 25 424 - -
Blo01g01635 431 Pfam Cyclin, N-terminal domain 179 303 IPR006671 -
Blo01g01635 431 Gene3D - 178 418 - -
Blo01g01635 431 SUPERFAMILY Cyclin-like 167 303 IPR036915 -
Blo01g01635 431 SUPERFAMILY Cyclin-like 305 424 IPR036915 -
Blo01g01635 431 SMART Cyclin_C_2 306 423 IPR004367 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01635 Blo-Chr1:56180721 Blo08g00138 Blo-Chr8:1455470 1.25E-77 dispersed
Blo18g00177 Blo-Chr18:1706331 Blo01g01635 Blo-Chr1:56180721 1.63E-52 dispersed
Blo01g01635 Blo-Chr1:56180721 Blo18g00748 Blo-Chr18:20206142 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01635 K21777 - tcc:18591703 618.231