Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Blo01g01638 | ATGGAGTGGCAGAATCAGCAGCAAAACCAAGCAGAGCAACTGCCAATGCAAATGCCAAGTGATCAATTGCAGAACCCAGATGGGTTGTACGTCAAAGTGATGACGGACGAGCAAATGGAGCTTCTCCGGCGACAGATCTCCGTCTACGCTACCATTTGTGAGCAGCTTGTCGAGATGCACAAGGCGATGACTGCCCAACAGGACCTAACAGGAATGAGGTTGGGGAATCTCTATTGTGATCCAATGATGGCATCTAGCGGCCACAAGATTACTGCTCGACAAAGGTGGACTCCAACTCCCGTGCAGCTTCAAATGCTGGAGCGTATTTTTGACGAAGGAAATGGCACCCCAAGCAAGCAGAAGATTAGAGAGATAACTGTGGAGCTCTCACAACACGGCCAAATCTCTGAAGCGAATGTGTATAATTGGTTCCAAAACAGAAGAGCTCGTTCGAAAAGAAAGCAGTCTGTTTCGATCCAAAACAACGCAGATTCAGAAGTTGAAACTGAAGTCGAGTCTCCAAAGGAAGAGAAGACGAAGCTGGTAGGCGTCCGATCGTTCGAGAATCTCGGACAGAGGATGGGTGATGTTTATAACGAGGAATCGGAAATAAATGCCAAAATGCAGTACTTGGATGCACAATTCAATAAAGGGGAGCCCATTTTTCACTTCAGATCTTGTAATTCAGGCCATATGAGTGCCGTGCCGAATCAAAGGACCGATCTGACGATCAACAAATTGGAAATTCCGGGGAGTTATAGCTCCTACAATCCTTGTGAAGGGACCAATATGACTCATTATAACCTCTGCAATTTTGCACTCCTATTGGAAGATGATTGTATTTCTGGTATCATGCTTTCGCCGTTGGCTGGTATGTATTTTTCAGAGTCTGCAGTATCGAGTTCTTGGGTTCTTGGATGCGTTCATCCGAACACTTTTTCCATTCATAGATCGAAATTCATCAAACTGTTCGATAGATTTTCTCATCCACTTTGA | 996 | 45.18 | MEWQNQQQNQAEQLPMQMPSDQLQNPDGLYVKVMTDEQMELLRRQISVYATICEQLVEMHKAMTAQQDLTGMRLGNLYCDPMMASSGHKITARQRWTPTPVQLQMLERIFDEGNGTPSKQKIREITVELSQHGQISEANVYNWFQNRRARSKRKQSVSIQNNADSEVETEVESPKEEKTKLVGVRSFENLGQRMGDVYNEESEINAKMQYLDAQFNKGEPIFHFRSCNSGHMSAVPNQRTDLTINKLEIPGSYSSYNPCEGTNMTHYNLCNFALLLEDDCISGIMLSPLAGMYFSESAVSSSWVLGCVHPNTFSIHRSKFIKLFDRFSHPL | 331 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 56208171 | 56210238 | + | BLOR01638 | Blo01g01638 | 56078 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Blo01g01638 | 331 | Pfam | Homeodomain | 93 | 153 | IPR001356 | GO:0003677 | |
| Blo01g01638 | 331 | PANTHER | WUSCHEL-RELATED HOMEOBOX 13 | 1 | 263 | IPR044559 | GO:0003700 | |
| Blo01g01638 | 331 | SMART | HOX_1 | 91 | 158 | IPR001356 | GO:0003677 | |
| Blo01g01638 | 331 | MobiDBLite | consensus disorder prediction | 152 | 174 | - | - | |
| Blo01g01638 | 331 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Blo01g01638 | 331 | SUPERFAMILY | Homeodomain-like | 92 | 157 | IPR009057 | - | |
| Blo01g01638 | 331 | ProSiteProfiles | 'Homeobox' domain profile. | 89 | 154 | IPR001356 | GO:0003677 | |
| Blo01g01638 | 331 | Gene3D | - | 95 | 159 | - | - | |
| Blo01g01638 | 331 | PANTHER | - | 1 | 263 | - | - | |
| Blo01g01638 | 331 | CDD | homeodomain | 93 | 155 | IPR001356 | GO:0003677 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Blo01g01638 | Blo-Chr1:56208171 | Blo14g00416 | Blo-Chr14:4650611 | 1.84E-14 | dispersed | |
| Blo07g01201 | Blo-Chr7:31895914 | Blo01g01638 | Blo-Chr1:56208171 | 1.19E-13 | dispersed | |
| Blo01g01638 | Blo-Chr1:56208171 | Blo16g00107 | Blo-Chr16:2484489 | 4.43E-86 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 11944 | PF00046 | Homeodomain | 1.10E-17 | CL0123 | Blo | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Blo01g01638 | - | - | bhj:120085747 | 339.347 |