Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01641 ATGGCTGCTAGTACTGATTTTTCACCTACATTTACATTAAGAGAGGGTGGTTACAGTAACGCAAACGGTTCAGCCCCAGAAGCTGAGGATGCCAGTGAGTTGAACAATATAAAACAAATCAACAATGGGAAACCTCCGCGGCACCTCTCTGTAAAGCGCCATAGTATTAGCTCTATGGGGCTGCTTGGCCCGGCTGATCTGAGTTTGGATCCTGCGAATGATGACAGTAAGTCACCAGATGAAAAGAGAGAATTCGTACCTGTTTTCAGATCGGGAAGTTGTGCTGAAAGAGGACCTAAACAGTACATGGAGGATGAACACATTTGTATAGATGATCTCTACAAACATATAGGTTCAATCGATGATACCATATCTCCTTTGGCTTTTTATGGGGTGTTTGATGGTCATGGTGGTACAGATGCAGCGTCATTTGTCAGAAATAATATCCTCAGATTCACAGTCGAGGATTCTCACTTTCCAGTTTGTATGGAGAAAGCAATTAAGAGTGCTTTTCTGAAAGCTGATTATGCATTTGCAGACACTAGTTCACTTGATGTTTCCTCTGGTACGACAGCCCTAACTGTCTTTATCTTGGGGAGATCAATGATAATTGCCAATGCTGGTGATTGTCGAGCTGTTTTGGGAAGGCGGGGCAGAGCGGTTGAGATGTCGAAAGACCACAAACCCAACTGCATGTACGAACGGAGGAGAATTGAGAAGCTTGGTGGAGTAATTTATGACGGCTATCTCAATGGTCAGCTATCTGTTTCAAGGGCCATAGGAGATTGGCACATGAAAGGTGCCAAGGGTCAGCCATGTCCATTGAGTGCTGAGCCGGAGTTGCAGGAAATTGTCCTGACCGAGGACGACGAGTTTCTAATATTGGGATGTGATGGGCTGTGGGATGTAATGAGCAGTCAGTGCGCTGTTACTATGGCAAGGAAAGAGCTGATGCTCTACAATGACCCTGAAAGATGCTCAAGAGAGTTGGTGAGTGAGGCTCTCAAGCGCAACACTTGTGATAATTTGACGGTCATTTTGATCTGCTTTTCTCCTGACCCTCCCCCTCGGATAGAGATACCTCCATCTCGAGTAAGGCGGAGTATTTCAGCAGAGGGTCTGAACTTGTTGAAAGGCATACTAGACTCTAATTGA 1155 45.37 MAASTDFSPTFTLREGGYSNANGSAPEAEDASELNNIKQINNGKPPRHLSVKRHSISSMGLLGPADLSLDPANDDSKSPDEKREFVPVFRSGSCAERGPKQYMEDEHICIDDLYKHIGSIDDTISPLAFYGVFDGHGGTDAASFVRNNILRFTVEDSHFPVCMEKAIKSAFLKADYAFADTSSLDVSSGTTALTVFILGRSMIIANAGDCRAVLGRRGRAVEMSKDHKPNCMYERRRIEKLGGVIYDGYLNGQLSVSRAIGDWHMKGAKGQPCPLSAEPELQEIVLTEDDEFLILGCDGLWDVMSSQCAVTMARKELMLYNDPERCSRELVSEALKRNTCDNLTVILICFSPDPPPRIEIPPSRVRRSISAEGLNLLKGILDSN 384
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 56219899 56221827 - BLOR01641 Blo01g01641 56081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01641 384 CDD PP2Cc 89 350 IPR001932 -
Blo01g01641 384 MobiDBLite consensus disorder prediction 1 19 - -
Blo01g01641 384 Pfam Protein phosphatase 2C 91 342 IPR001932 -
Blo01g01641 384 Gene3D - 70 353 IPR036457 -
Blo01g01641 384 MobiDBLite consensus disorder prediction 63 83 - -
Blo01g01641 384 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 1 372 - -
Blo01g01641 384 SUPERFAMILY PP2C-like 83 351 IPR036457 -
Blo01g01641 384 SMART PP2C_4 80 348 IPR001932 -
Blo01g01641 384 MobiDBLite consensus disorder prediction 1 32 - -
Blo01g01641 384 ProSitePatterns PPM-type phosphatase domain signature. 129 137 IPR000222 GO:0043169
Blo01g01641 384 PANTHER PROTEIN PHOSPHATASE 2C 1 372 IPR015655 GO:0004722|GO:0006470
Blo01g01641 384 ProSiteProfiles PPM-type phosphatase domain profile. 90 350 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g01641 Blo12g00848 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01641 Blo-Chr1:56219899 Blo18g00040 Blo-Chr18:265747 2.20E-119 dispersed
Blo15g00788 Blo-Chr15:26878457 Blo01g01641 Blo-Chr1:56219899 9.26E-41 dispersed
Blo01g01641 Blo-Chr1:56219899 Blo12g00848 Blo-Chr12:26748581 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01641 K14803 - qsu:112023621 599.742