Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01651 ATGGCCGGCTATAACGAAGCGGGAGCACCAGGTACTTGCATCGTTCATCAACTTTTCCGGCCAGAACAGAACTTTCAGAGACAGTCAATTCCACCGCCGCAAACTGCTAATTCGGATTCGAAACAATCATTTCATACCCAACAAAAGATCGCCACCACCAACACCGACGCCATGGCCTCCTCCGCCCACAGCTCCATACGCCGGCCGAGAGGCCGTCCTCCTGGCTCCAGAAACAAACCCAAGGCTCCGATTATCGTGACGCGTGAGAGCCCCAGCTCACTCGGCTCGCACGTGCTCGAAATCTCTGCTGGCTCAGATATCGTGGAAAGCCTTTCGAACTATGCCAGCCGACAGGGCAGAGGAGTCTGCGTGATGAGCGGTAGCGGGACAATTTCAAACGTCAGTCTGCGCGAACCTGCCGGAAGCGCCGTCTCTCTTCCCGGACGGTTCGAGATTCTGTCGCTCACGGGAACCGTGCTTCCTCCTCCGGCTCCGCCGAGTGCAGGCGGTTTATCCTTGTTCTTATCTGCTGGACAAGGACATGTAGTGGGAGGCAGCGTGGTTGGCCCTTTAATGGCTTCAAGCCCCGTGGTTTTAATGGCGGCCTCGTTTTCCAATGCCGTGTTTGAACGTTTGCCACTGGAGGAAGATGATCACGAGGAGCCATTAGTTCAACCATCCGGGTCGCAGTCGTCCGGGATAACAGGAGGTGGCGCTGCCGCACAGGTATCCGACGGTGGAGGCTTCCGCAGTGGACGGGGAAACGTCGGGGATGCTGTTTTAGCCGGTATGGGAGGAAACATAGCCGGTGGATATCCTCATTTAGCGGCAGATATATTTGGGTTGAGTGCAAGCGTCACAAGGCCTCCATTTTAG 876 56.16 MAGYNEAGAPGTCIVHQLFRPEQNFQRQSIPPPQTANSDSKQSFHTQQKIATTNTDAMASSAHSSIRRPRGRPPGSRNKPKAPIIVTRESPSSLGSHVLEISAGSDIVESLSNYASRQGRGVCVMSGSGTISNVSLREPAGSAVSLPGRFEILSLTGTVLPPPAPPSAGGLSLFLSAGQGHVVGGSVVGPLMASSPVVLMAASFSNAVFERLPLEEDDHEEPLVQPSGSQSSGITGGGAAAQVSDGGGFRSGRGNVGDAVLAGMGGNIAGGYPHLAADIFGLSASVTRPPF 291
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 56304124 56304999 - BLOR01651 Blo01g01651 56091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01651 291 MobiDBLite consensus disorder prediction 217 248 - -
Blo01g01651 291 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 15 247 IPR014476 GO:0003680
Blo01g01651 291 MobiDBLite consensus disorder prediction 224 238 - -
Blo01g01651 291 SUPERFAMILY AF0104/ALDC/Ptd012-like 92 220 - -
Blo01g01651 291 PIRSF ESCAROLA 11 289 IPR014476 GO:0003680
Blo01g01651 291 Gene3D - 96 224 - -
Blo01g01651 291 MobiDBLite consensus disorder prediction 19 88 - -
Blo01g01651 291 CDD DUF296 97 176 IPR005175 -
Blo01g01651 291 ProSiteProfiles PPC domain profile profile. 91 225 IPR005175 -
Blo01g01651 291 MobiDBLite consensus disorder prediction 19 62 - -
Blo01g01651 291 Pfam Plants and Prokaryotes Conserved (PCC) domain 97 206 IPR005175 -
Blo01g01651 291 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 29 15 247 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01651 Blo-Chr1:56304124 Blo03g00383 Blo-Chr3:9086916 3.04E-58 dispersed
Blo01g01651 Blo-Chr1:56304124 Blo04g00266 Blo-Chr4:2021023 2.07E-58 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01651 - - rcu:8273670 263.848