Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01657 ATGACCGCTGAGGTTGATGCGCGCTCTGAGGTTTCTCAGGTTCTGGATAAGGGTGGCTTGGCCCATGAGGATTTTGCCAAAGGTGGTGCTCGTGTCGGCGATGGGATTTCCCTTCCAAAAGGCAATGAAATAGACAGCGATGGGGCCTGTGGCTCTTACGTTATGATCAATGGGAGTGATGAGGTCGCTGACGATTCTGTTCACATGGATCCCAATCCGGAGGTTGAGTTGGAGTGTTCTGGCAATGGCAACATTGAGACTGATGCTGAACCCAAAATTGAGAATCGGAATGAACCTAAATTTTGCGTTTTTGATGAAATTGGTGGCGTTGGTCATGTTGTTGGGAGGGACCTTGGAGAAAGCGCTTCCAATTGGCTGATGAATGATATTGAGGCTAGAAATAATGTTTCGGAAGGTGACCAAAAGCAAGAAGAAGATACTGAAACGGAGTCTTTTGAGAAGGTAGAAGAGATACCAAAATCGGAAGATGCCGTTTGTGATGCTGCCGATGATAATTGCAACTATCCACAAGCGAACTGTAAAGAGGACAAACATGATGTGAAAATCATGTCGGATTCTAATGGCATTGTTGGAGAGTTTGGGGAACTTACATCTTCAATTACGCATAATGACGCATTTGTCCCAGAACAGAATGGTGATGCAGTGTATAAGGATGATCATGGAAATAAGTTAAATGCTTCACCAAATAAGCATGAAGAGGACGTTGCATACGATGAAAACAACTTGATTTTAGGTGAGAAACATTTAGTTGTGAACGGAGAGGATTCAGTTGTAGGTCAATCAGGAGACAAAGAAGAGGAATTAGAGCAAAATTTTGTAAGTGTTCCCACTATTGAAGTCAGTGTACTTTTAGAAAGAGATATCGTGGATCATTCTCTCCCTCATGGAAGTGGAAGTTCACAGGATTCAGAAACAGATAAGTGTCTCATTGATGATAAAGATGCACTAGCAGAAGGGTCTATCTCTCATGGAAGGGGAGATTGCCTTGCTGCTGGACAGGATCAAGATGGGGATCCTCAATATGATGATTGTGAGATTGTATCTGGTGAAACTTGTGCGATTTCGACTGACAGTGCTACCAAAATGGATATTGTTGGTGAGAGGCCCTTGGAAGATCATCCTTTAGTTATGGAGAAGAGTTCACAGGATTCAGAAACAGATAAGTGTCTCATAGATGATAAAGATTCACAAGCAGAAGGCTCTATATCTGGTGATAAGGGAGATGAATTGCCTACTTCACCTGACGAAGATATAGCTTCAAACACAAGTATGCCCAATGACTTGGTCCTCAGCAGTCAAAATATACTTGAAGGAAATAGGCAGTTGGAAAACACAGTTATGGCTTCCTCTATTGTCATGGTGGGGAGTGTAGAAATAAATTGTGATGAAGTTTTTCCTTCCCTTCCTTTCAATAATGCTGCTATAAAATCGTTTCAGTTCTCCCCTGCCGTTGAGAATCTAAGATTGGACTTGAAAGTTAAAAGTTCTCCAGAAAGCATTGACAATCCTGACTCTTGCTGTCTTCAAGGAACAAAAATAAAAGCTAAGTCTGAGAATGGAAGTGTTGATGAAGATACTCAATCGATTTGCTTTAGTAATGATCAGGGGAACCTAAACCATGTGTCTGATGTCAATGAAGTTGAAAGTGAAGGTAGTACATATCAAGAAGTTAAGGTCGTTGATGAGATTAACTGGGGTTCATCCTTAGGAACTCTTGAGTGTTCCACTCATGATACTGCAGGGCCTCTGAATGTAGTTTCTGAGGTTGGGTCTGGGCCAGTCTACAGGAGTCCAAGCTATGAAGAAGATACACAATCGAGTTGCCTTAGTAACGATCAGGGGAGCATAAACCATGCATCTGAGGTCAATGAAGTCGAAAGTAATGGTAGTACATCTCAAGAAGTTAAGGTCATTGATGAGATTAACTGGGATTCATCCTTTGGAACTCAGTGTTCCACTCTCGATACTGCAGAGCCTCTGAATGTAGTTGCTGAGGTTGGGTCTGGGTCATTCCACTTTGTTAGGATTCCAAGATTTGAAGATGAATCCATTCGAGAAAAGATAAAGCATGCTCAGTCTCTCGTTGATGAAAAGACTCAAACTCGGGATTCCTTTCGAGATCAGATTCAGACTACCAAGGCTGCATGTAAAGAATTGGGTAGTAACCTCAGTGCTGCCAAGTCAGAAGCAAGAGCAGCACGGGAATCGCTGAAATTGAAACGGAAGGAAATAGAGACTGCCCAATCTATGATTAACAAAGCGAAGGATGCAATATCAATTGATGATATTGGAATCAGGATAAACAAAATGGAACACAAAATTGCCCATGAAACGCTTCCATTGAAGGAAGAAAAGCAGTTGATTCGTGATATCAAGCAGTTGACGCAACTTCGAGACCAATTATCACTTGGAGGCAAACAAGGTGAGCTCCAGCTGGCATTGGACCAGAAAGGCGAGGTTGAAGAGCGCTTAACGCTTTTGAGGAAGGAGATGGATTTAATGAAGGCTAATGTTCTCAAAGCTGACGAACTGACTACATCTATGCTGAAGAAGTATGATGGGGAGAGAGAAAAGCTTAACGGATTACAAGCCCAATTTGAAGAAGCTAATAAGATTCGGCAAGAAGCTTATGTGCATTTACAAAGCTTGAAGAAACCTCTTGATGAGAAGCGCAAGTATTTTAGGAAGTACAAGAATGACATGGAGGAGGCCGACAATTTGGCATTACGTAAAGATGGAGAGAAACTGCAAGCTCATGCCAACCAGGTGGAGACATTTATGGAAAGATGGAACAACGATGATGAGTTTCGGAAAGACTATGTCAGGTGCAACACTAGAAGTACCTTGAGAAGACTGGGGACGTCTGATGGTCGATCACTTGCGCCTGATGAGGAGCGACCGGTACTTAACAATGTTATAAAGGAAAGAGCAGCAACAAATAGTTTGGTTTCTCCTGGGTTGACAGTGGAACAAAACAAACCAGCTGGGCAGGTTGAAACGGTAAAAGATAAGCATAAGCCAGCAAAGGGAGCGAAAAAGAAGAATCAAGAGACAGAAACTAAGAACCCTGTGGCCGCCGTTCCTACTTTACCAGATGCCCAAGCATCAGTTTCTGGTGGGGTTGAGCTAGTTGATACAAAAGACTCTAGTGGACTTGATTTTGCCGATACAATAGAGGAGGATAAACGATCAAAGGAGGAAGATGAGCTGGAAAAGATAGCTGAGAAGTGGAGAAAGGAAGAGGAAGCAATCAGGTTGAAAGAGCAGCTTAAGTTGGAGGAGAAGGCAAAAGCTGAGATAGCTTTGGAGAGGAAAAAACGCAAGGCAGAGAAGGCTCAAGCTCGGGCTGCAATTAGAGCCCAAAAGGAAGCTGAAGAGAAACAGAAGGAAAAGGAGAAGAAAGCAAGGAGGAAGAAAAAGAAGGCTGCAGGAGGAGAGGCTAAAAACGAGGCCGACATCGAGGAAGAACCAGCTGCCAGCATGGAGACTCCAACAGTCACTCAAAATACTGAGAAATCAAAGACTCCATCGACAAAGTCCCAAAAACGTCCACCGTTTACGAAGGCAAAACCTCTTATTCCTCCGCCACTCCGGAAGCGGGGTAAGAGAAAAATGGAGACGTGGATGTGGATTCTTCTCACAGTGGCCATTGTCTTGGCCGCCTTCTTTCTGGGCAACCTCAGCTTCCTTCGGAAACTGGCCATGGGAAAATTTAGCTTCTAA 3744 43.3 MTAEVDARSEVSQVLDKGGLAHEDFAKGGARVGDGISLPKGNEIDSDGACGSYVMINGSDEVADDSVHMDPNPEVELECSGNGNIETDAEPKIENRNEPKFCVFDEIGGVGHVVGRDLGESASNWLMNDIEARNNVSEGDQKQEEDTETESFEKVEEIPKSEDAVCDAADDNCNYPQANCKEDKHDVKIMSDSNGIVGEFGELTSSITHNDAFVPEQNGDAVYKDDHGNKLNASPNKHEEDVAYDENNLILGEKHLVVNGEDSVVGQSGDKEEELEQNFVSVPTIEVSVLLERDIVDHSLPHGSGSSQDSETDKCLIDDKDALAEGSISHGRGDCLAAGQDQDGDPQYDDCEIVSGETCAISTDSATKMDIVGERPLEDHPLVMEKSSQDSETDKCLIDDKDSQAEGSISGDKGDELPTSPDEDIASNTSMPNDLVLSSQNILEGNRQLENTVMASSIVMVGSVEINCDEVFPSLPFNNAAIKSFQFSPAVENLRLDLKVKSSPESIDNPDSCCLQGTKIKAKSENGSVDEDTQSICFSNDQGNLNHVSDVNEVESEGSTYQEVKVVDEINWGSSLGTLECSTHDTAGPLNVVSEVGSGPVYRSPSYEEDTQSSCLSNDQGSINHASEVNEVESNGSTSQEVKVIDEINWDSSFGTQCSTLDTAEPLNVVAEVGSGSFHFVRIPRFEDESIREKIKHAQSLVDEKTQTRDSFRDQIQTTKAACKELGSNLSAAKSEARAARESLKLKRKEIETAQSMINKAKDAISIDDIGIRINKMEHKIAHETLPLKEEKQLIRDIKQLTQLRDQLSLGGKQGELQLALDQKGEVEERLTLLRKEMDLMKANVLKADELTTSMLKKYDGEREKLNGLQAQFEEANKIRQEAYVHLQSLKKPLDEKRKYFRKYKNDMEEADNLALRKDGEKLQAHANQVETFMERWNNDDEFRKDYVRCNTRSTLRRLGTSDGRSLAPDEERPVLNNVIKERAATNSLVSPGLTVEQNKPAGQVETVKDKHKPAKGAKKKNQETETKNPVAAVPTLPDAQASVSGGVELVDTKDSSGLDFADTIEEDKRSKEEDELEKIAEKWRKEEEAIRLKEQLKLEEKAKAEIALERKKRKAEKAQARAAIRAQKEAEEKQKEKEKKARRKKKKAAGGEAKNEADIEEEPAASMETPTVTQNTEKSKTPSTKSQKRPPFTKAKPLIPPPLRKRGKRKMETWMWILLTVAIVLAAFFLGNLSFLRKLAMGKFSF 1247
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 56335294 56340633 + BLOR01657 Blo01g01657 56097

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01657 1247 MobiDBLite consensus disorder prediction 135 160 - -
Blo01g01657 1247 MobiDBLite consensus disorder prediction 374 432 - -
Blo01g01657 1247 Coils Coil 1099 1149 - -
Blo01g01657 1247 MobiDBLite consensus disorder prediction 1110 1207 - -
Blo01g01657 1247 MobiDBLite consensus disorder prediction 1110 1139 - -
Blo01g01657 1247 Coils Coil 730 764 - -
Blo01g01657 1247 MobiDBLite consensus disorder prediction 1168 1191 - -
Blo01g01657 1247 MobiDBLite consensus disorder prediction 1004 1026 - -
Blo01g01657 1247 Coils Coil 859 879 - -
Blo01g01657 1247 MobiDBLite consensus disorder prediction 999 1030 - -
Blo01g01657 1247 PANTHER CALPONIN-LIKE DOMAIN PROTEIN 148 1237 - -
Blo01g01657 1247 MobiDBLite consensus disorder prediction 134 160 - -
Blo01g01657 1247 PANTHER RNA-BINDING PROTEIN YLMH-RELATED 148 1237 - -
Blo01g01657 1247 Coils Coil 817 844 - -
Blo01g01657 1247 MobiDBLite consensus disorder prediction 374 409 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01657 - - - cmos:111446165 486.493
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01657 Blo-Chr1:56335294 Blo07g00950 Blo-Chr7:28798967 6.28E-20 dispersed
Blo01g01657 Blo-Chr1:56335294 Blo12g00838 Blo-Chr12:26673858 4.49E-79 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g25 Blo01g01657 . . . Bpe02g00286 . . . . . Cma01g02052 Cma09g00011 Car01g01616 . . . . . . . . . . . . . . . . . . . . . . Lsi04g02435 Csa04g02749 . . . . . . . . . . . Cmo01g02107 Cmo09g00011 . . . . . Cpe02g00007 . . . . . . . . . . . . . . . . Chy07g00437 Cme07g00014
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011484 0 2 2 0 2 0 2 0 0 1 0 1 2 1 1 2 0 0 1 0 1 1 1 1 1 1 1 1 0 1 26
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo01g01657 Blo_Chr01 FPKM 0.0 0.0 0.0 0.0 0.0 3.103062 2.044861 0.0 0.0 2.296387