Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01664 ATGGTGAAGGCCACCGAATACTACGACGTTCTTGGAGTCAGCCCCACCGCCTCCGAGGCCGAGATCAAGAAAGCATATTATTTGAAGGCAAGACAAGTCCATCCAGATAAAAATCCAAACGACCCTCTAGCAGCACAGAATTTTCAGGTGTTGGGAGAGGCTTACCAGGTATTAAGTGATGCAGGACAACGACAATCATATGATGCTTATGGAAAAGCTGGAGTCTCAACGGATGCAATTATTGATCCAGCAGCAATCTTTGCCATGCTTTTTGGTAGTGAGCTTTTTGAAGAATATATTGGGCAACTTGCAATGGCATCAATGGCTTCACTAGACATTTTTACGGAAGGGGAACAGTTTGATGCCAAAAAGTTGCAGGAGGAAATGAGGATTGTTCAAAAAGAAAGAGAGGAAAAGCTTTGTCAGATACTTAAAGATCGACTAAACCAATATGTGCAAGGTGGTAAAGAAGAATTCATCAATCATGCCGAAGCTGAAGTGGCAAGACTCTCCAATGCAGCCTACGGTGTTGACATGTTAAGTACAATTGGCTACATATACGCCAGACAGGCAGCGAAAGAGCTGGGGAAGAAGGCAATATATTTGGGTGTGCCATTTGTTGCTGAGTGGTTCAGGAACAAAGGTCACTTTATAAAATCCCAAGTCACAGCTGCAACAGGTGCAATTGCTCTGATTCAGCTGCAGGAGGATATGAAAAAGCAACTTAGCGGAGAAGGAGATTACACTGAGGAAGAGCTTGAATCATATGTCCAATCTCATAAGAAATTGATGATCGATTCTCTTTGGAAGCTTAATGTTGCTGATATTGAGGCTACGCTTTCCCGTGTTTGTCAAATGGTCCTCCAAGATAATAATGTCAAGAAGGAAGAGCTCCGTGCACGAGCAAAAGGGTTAAAGAATCTTGGTAAAATCTTTCAGAGGGTAAAATCCAATGGGAATGAGAACGAGGCTGTGCCGAAGCTGAACGGAAGTGAATCAAGAAATGATACTTGTTCGTCAATTTCATCTCGTAAATCTTCAGACTGTGAAGAATCTTCTGACTATTCATATCCATCACAGAGTCCCTATGTAGAGACCCCCAACTTGCTAGGTGCACAAATAAATGACTACTTTCCCAGACCGACACCTCCACCCGGTGCACAAAGGCATACAGATAAGATTTAA 1185 42.87 MVKATEYYDVLGVSPTASEAEIKKAYYLKARQVHPDKNPNDPLAAQNFQVLGEAYQVLSDAGQRQSYDAYGKAGVSTDAIIDPAAIFAMLFGSELFEEYIGQLAMASMASLDIFTEGEQFDAKKLQEEMRIVQKEREEKLCQILKDRLNQYVQGGKEEFINHAEAEVARLSNAAYGVDMLSTIGYIYARQAAKELGKKAIYLGVPFVAEWFRNKGHFIKSQVTAATGAIALIQLQEDMKKQLSGEGDYTEEELESYVQSHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNNVKKEELRARAKGLKNLGKIFQRVKSNGNENEAVPKLNGSESRNDTCSSISSRKSSDCEESSDYSYPSQSPYVETPNLLGAQINDYFPRPTPPPGAQRHTDKI 394
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 56388186 56393225 - BLOR01664 Blo01g01664 56104

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01664 394 CDD DnaJ 6 60 IPR001623 -
Blo01g01664 394 Pfam DnaJ domain 6 68 IPR001623 -
Blo01g01664 394 Coils Coil 122 142 - -
Blo01g01664 394 ProSiteProfiles dnaJ domain profile. 6 71 IPR001623 -
Blo01g01664 394 PRINTS DnaJ domain signature 63 82 IPR001623 -
Blo01g01664 394 PRINTS DnaJ domain signature 8 26 IPR001623 -
Blo01g01664 394 PRINTS DnaJ domain signature 26 41 IPR001623 -
Blo01g01664 394 PRINTS DnaJ domain signature 43 63 IPR001623 -
Blo01g01664 394 Gene3D DnaJ domain 1 83 IPR036869 -
Blo01g01664 394 PANTHER CHAPERONE PROTEIN DNAJ 10-LIKE ISOFORM X1 1 360 - -
Blo01g01664 394 MobiDBLite consensus disorder prediction 321 368 - -
Blo01g01664 394 MobiDBLite consensus disorder prediction 321 394 - -
Blo01g01664 394 Pfam X-domain of DnaJ-containing 133 323 IPR026894 -
Blo01g01664 394 ProSitePatterns Nt-dnaJ domain signature. 48 67 IPR018253 -
Blo01g01664 394 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 360 - -
Blo01g01664 394 SMART dnaj_3 5 63 IPR001623 -
Blo01g01664 394 SUPERFAMILY Chaperone J-domain 2 101 IPR036869 -
Blo01g01664 394 Coils Coil 288 308 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01664 - - - csv:101221160 641.728
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01664 Blo-Chr1:56388186 Blo18g00226 Blo-Chr18:2226215 1.19E-134 dispersed
Blo01g01664 Blo-Chr1:56388186 Blo12g00834 Blo-Chr12:26640297 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g3 Blo01g01664 . . Bda03g00342 Bpe02g00277 Bpe04g00302 Bma04g00311 Bma01g02435 . . . . . . . . . . . . . . . . . . . . . . . . . Cone17ag1483 . Lsi04g02441 Csa04g02758 . . . . . Bda01g01580 Bpe02g01770 . . . . . . . . . . . . . . . . . . . Cla11g01868 Cam11g1938 Cec11g1964 . Clacu11g2104 Cmu11g1905 Cre11g2313 . . Chy07g00444 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002184 1 3 2 3 3 1 3 1 0 2 1 2 2 1 2 3 0 3 2 1 2 2 2 2 1 3 2 4 2 2 58
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo01g01664 Blo_Chr01 FPKM 694.761658 680.769104 1501.056763 1431.187866 414.709167 480.612457 415.889893 704.337646 762.382202 697.013062