Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo01g01672 | ATGGAGGAATATGGTGGTAATGGCGGTGGGCGTTCTCCTCCCACTTACAAAGGAGTCAGGAAGAGAAAATGGGGCAAATGGGTATCCGAAATTCGAGAGCCTGGAAAGAAGACCCGAATATGGCTAGGGAGTTATGAGGCGCCGGAAATGGCCGCCGCCGCCTACGACGTGGCGGCTTTACACCTAAAAGGATCAGGGACCCACCTCAATTTCCCTGAGTTGGCGGAGAGCCTACCTCGCCCGGCGAGCTCCAGGCCTGAAGATATTCAACTAGCGGCTCAAGAAGCAGCATTGCGGTTCAGAAAACCGGGGAGCTTTGCCACGTCGTCGTTAATGGATGAGTCGGGCGGAGAGAGAAGCATTCCGGCGGTGAGAGTGGGTCTGTCGGCAAGCCAAATTCAGGCGATCAACGACTGGCCGTTGGATTCCCCGACGATGTGGATGCAAATGTGTGAAAACGAGGACTGTAGTAATAGCAAACAGTGGAATACGGAGTGGGAAGAAGAGACGAGGCAGTATCAAAATGATCAGTCCCAGTCAATATGGGATTATTAA | 555 | 52.97 | MEEYGGNGGGRSPPTYKGVRKRKWGKWVSEIREPGKKTRIWLGSYEAPEMAAAAYDVAALHLKGSGTHLNFPELAESLPRPASSRPEDIQLAAQEAALRFRKPGSFATSSLMDESGGERSIPAVRVGLSASQIQAINDWPLDSPTMWMQMCENEDCSNSKQWNTEWEEETRQYQNDQSQSIWDY | 184 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 56454109 | 56454663 | + | BLOR01672 | Blo01g01672 | 56112 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo01g01672 | 184 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF022 | 15 | 183 | - | - | |
Blo01g01672 | 184 | Gene3D | AP2/ERF domain | 15 | 73 | IPR036955 | GO:0003700|GO:0006355 | |
Blo01g01672 | 184 | ProSiteProfiles | AP2/ERF domain profile. | 15 | 72 | IPR001471 | GO:0003700|GO:0006355 | |
Blo01g01672 | 184 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Blo01g01672 | 184 | MobiDBLite | consensus disorder prediction | 161 | 184 | - | - | |
Blo01g01672 | 184 | CDD | AP2 | 16 | 74 | IPR001471 | GO:0003700|GO:0006355 | |
Blo01g01672 | 184 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED | 15 | 183 | - | - | |
Blo01g01672 | 184 | Pfam | AP2 domain | 14 | 64 | IPR001471 | GO:0003700|GO:0006355 | |
Blo01g01672 | 184 | PRINTS | Ethylene responsive element binding protein signature | 38 | 54 | IPR001471 | GO:0003700|GO:0006355 | |
Blo01g01672 | 184 | PRINTS | Ethylene responsive element binding protein signature | 16 | 27 | IPR001471 | GO:0003700|GO:0006355 | |
Blo01g01672 | 184 | SMART | rav1_2 | 15 | 78 | IPR001471 | GO:0003700|GO:0006355 | |
Blo01g01672 | 184 | SUPERFAMILY | DNA-binding domain | 15 | 73 | IPR016177 | GO:0003677 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo01g01672 | Blo-Chr1:56454109 | Blo08g00315 | Blo-Chr8:4539119 | 4.09E-37 | dispersed | |
Blo01g01672 | Blo-Chr1:56454109 | Blo12g00822 | Blo-Chr12:26570630 | 8.14E-96 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
11948 | PF00847 | AP2 | 8.00E-13 | CL0081 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo01g01672 | - | - | cpap:110818818 | 197.978 |