Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01682 ATGAGTCGAAGACGACTTCGGGTTGGATCGGGTCGAAACTGGATCGGTTCGGGTTGGGCCGAAACTGGGTCGGGTCGGATCAAGCTTGATCGGTTCGGGTCGGGCCGAAAACTGGGTCGGGTCGGATCAAGCTGGATCGGGTCGGGTCAGGCCGAAACTGGGTCGGGTGACTTAAGTTGGACCGAACCACTTCTTCCTCCTTCTCCCGTCTTCTTCTTCGTCTCGCGCAAACCAGAGGCAAACCAGAGGCAGAGTTCCTCTCTGCTTCGTGTCGAGAGGTCGTCTCACGTCCTTCGTTCGGCGTCGGCCGCCGCTGGAGGAAGAGATTTCGCCGCGGAGAGGAGTTCGACTGGAGGAAGTCACTTCGGGAGGGATTCCTTCGCTAGAGAGATCGTTGATCGTGCCAAACTTTCTACGGATTCTATGGACGCGATCGAGGAGCTTGCTCAGCTCTCTGAGTCTATGCAGCAAGCAGCCGCTTTGCTTGCAGACGAAGATGTTGATGAGAATTCCGGTTCTGGTGGTTCCTCCCGTAGGTCATCCACTTTCCTCAACGTTGTCGCTCTCGGAAATGTTGGTGCTGGTAAATCTGCAGTTTTGAATAGTTTGATTGGACACCCTGTTTTGCCAACTGGTGAAAATGGTGCTACCCGTGCTCCCATAAGCATTGATTTACAGAGGGATGGTTCGTTGAGTAGTAAATCAATTATTTTGCAGATCGACAATAAATCTCAACAAGTTTCTGCAAGTGCCTTACGGCATTCTCTACAGGATAGACTGAGTAAAGGTTCTTCTGGGAAGAGCCGGGATGAAATATATTTAAAGCTCCGCACGAATACAGCACCCCCCCTGAAATTGATTGATTTACCTGGGCTTGATCAACGGATAATAGATGATTCTATGGTCAGTGACTATGCTGAACATAATGATGCCATTTTGCTAGTCATAGTACCTGCAGCTCAAGCTCCTGAGATTGCTTCATCTCGAGCTCTTAGGGTCGCAAAGGAATATGATTCAGAAGGTACAAGAACAATTGGTATAATCAGCAAAATAGATCAGGCTTCTTCAGATCAGAAATCACTTGCTGCAGTCCAGGCTATCCTTTTAAATAAAGGGCCATCACGCACATCGGACATCCCATGGGTTGCTTTGATTGGTCAGTCAGTTTCAATTGCTTCTGCACAGTCTGGATCTGTAAACTCTGAAAATTCCTTAGAAACTGCATGGAAGGCTGAGACAGAGAGTCTCAAATCCATACTAACTGGAGCACCACATGATAAGTTAGGGAGAATAGCATTGGTGGATGCCCTGGCACAACAGATACGCAATCGTATGAAAGTCCGTGTTCCAAACCTTCTCTCTGGATTGCAAGGGAAGTCTCAAATAGTTAAAGATGAGTTGGTAAGACTTGGCGAACAAATGGTCCATGGTTCTGAGGGGACTAGGGCTTTAGCTTTGGAACTTTGCCGTGAATTTGAGGATAAGTTTCTCCAGCACATTGCGACTGGTGAGGGGGCTGGTTGGAAAATTGTTGCTAGCTTTGAGGGAAATTTTCCAAATAGAATAAAGCAGCTGCCTTTGGATAGACACTTTGATATTAACAATGTGAAACGGATTGTGCTAGAAGCTGATGGATATCAGCCATATCTTATATCACCTGAAAAGGGTTTGAGATCCTTAATAAAAGGTGTTTTGGAGCTTGCTAAAGAACCATCACGTCTTTGTGTTGATGAGGTGCACCGCGTTCTGGTAGATATAGTGTCTGCTTCTGCAAATTCTACACCAGGTCTTGGAAGATACCCTCCTTTTAAAAGAGAGGTTGTGGCCATTGCAAGTGCCGCTTTAGACAGTTTTAAAACTGAAGCAAAGAAGATGGTGGTTGCATTAGTGGATATGGAACGAGCTTTTGTGCCCCCCCAACACTTTATCCGTTTGGTACAAAGGAGAATGGAGAGACAACGGCGAGAGGAGGAGATTAAAACCCGATCTACAAAAAAGGGCCAGGAGGCCGAACAGGGGATATCCAAACGAGCTAGTAGTCCACAAACTGATGGTCAACAAACTGGTGGAAGCTTGAAGTCAATGAAAGATAAATCTGGAAAGGAAGAGAAGGAATTGCAAGAAAGTTCTGGTTTGAAGACTGCAGGTCCTGAAGGGGAAATAACAGCAGGCTATCTATTGAAGAAAAGTGCAAAAACAAATGGTTGGAGCCGTCGCTGGTTTGTTTTGAATGAGAAGACTGGAAAGCTTGGTTACACCAAAAAAGAAGAGGAGCGACATTTTCGTGGTGTCATCACCCTAGAGGAATGTTTGATAGAGGAGGGATTAGATGAAGAGGAGCCACCTCCTCCTTCAAAGAGTTCAAAGGATAAAAAGGCCAATGCTAATGGACCCTCTGGAAAAACACCCAATCTTGTCTTCAAGATTACCAGCAAAGTTCCTTATAAAACTGTTTTAAAAGCGCACAGTGCTGTTGTCCTGAAGGCTGAGAGCATGACCGATAAGGTTGAATGGACAAATAAGATACGCAACGTTATTCAACCTTCTAAAGGAGGACAAATGAAAGGAGCATCCTCTGAAGTTGGTCTCTCCATGCGACAAAGTCTTTCTGATGGTTCTCTGGATACAATGGTTAGAAGACCTGCTGACCCCGAAGAAGAACTCCGATGGATGTCTCAAGAAGTGCGGGGTTATGTTGAAGCAGTTTTGAGCAGTTTGGCTGCTAATGTTCCTAAAGCAGTTGTTCTGTGCCAAGTTGAGAAAGCCAAGGAAGATATGCTTAATCAGTTATACAGCTCAATCAGTGCCCAGAGCACTACAAGGATTGAAGAGCTACTTCAGGAGGACGCAAATGCAAGGCGCAGGAGAGAGAAATTCCAGAAACAGTCTTCTCTCCTCTCTAAATTAACACGTCAACTTAGCCTTCATGACAACCGTGCTGCTGCTGCTGCCTCCTCCAACTGGTCCGAAGGCAGTGAAACAGTATTGAAATATTTTGCAGAAAGCAGTCCAAGAACCAGCGCAGGTCCACCTGGCGAAGATTGGAGATCTGCATTTGATGCAGCTGCCAATGGCCCCACAGACTACCAGAGGACCTCATCAAATGGTCACGGTCGACATTACAGTGATCCAGCGCAAAATGGTGAGGTTAACTCTGGTGCAAATTCTGGCAGCCGCAGAACACCAAACAGATTGCCGCCGGCTCCACCACAATCCGCATCCGGCTCCAAATATTTTTAG 3240 46.45 MSRRRLRVGSGRNWIGSGWAETGSGRIKLDRFGSGRKLGRVGSSWIGSGQAETGSGDLSWTEPLLPPSPVFFFVSRKPEANQRQSSSLLRVERSSHVLRSASAAAGGRDFAAERSSTGGSHFGRDSFAREIVDRAKLSTDSMDAIEELAQLSESMQQAAALLADEDVDENSGSGGSSRRSSTFLNVVALGNVGAGKSAVLNSLIGHPVLPTGENGATRAPISIDLQRDGSLSSKSIILQIDNKSQQVSASALRHSLQDRLSKGSSGKSRDEIYLKLRTNTAPPLKLIDLPGLDQRIIDDSMVSDYAEHNDAILLVIVPAAQAPEIASSRALRVAKEYDSEGTRTIGIISKIDQASSDQKSLAAVQAILLNKGPSRTSDIPWVALIGQSVSIASAQSGSVNSENSLETAWKAETESLKSILTGAPHDKLGRIALVDALAQQIRNRMKVRVPNLLSGLQGKSQIVKDELVRLGEQMVHGSEGTRALALELCREFEDKFLQHIATGEGAGWKIVASFEGNFPNRIKQLPLDRHFDINNVKRIVLEADGYQPYLISPEKGLRSLIKGVLELAKEPSRLCVDEVHRVLVDIVSASANSTPGLGRYPPFKREVVAIASAALDSFKTEAKKMVVALVDMERAFVPPQHFIRLVQRRMERQRREEEIKTRSTKKGQEAEQGISKRASSPQTDGQQTGGSLKSMKDKSGKEEKELQESSGLKTAGPEGEITAGYLLKKSAKTNGWSRRWFVLNEKTGKLGYTKKEEERHFRGVITLEECLIEEGLDEEEPPPPSKSSKDKKANANGPSGKTPNLVFKITSKVPYKTVLKAHSAVVLKAESMTDKVEWTNKIRNVIQPSKGGQMKGASSEVGLSMRQSLSDGSLDTMVRRPADPEEELRWMSQEVRGYVEAVLSSLAANVPKAVVLCQVEKAKEDMLNQLYSSISAQSTTRIEELLQEDANARRRREKFQKQSSLLSKLTRQLSLHDNRAAAAASSNWSEGSETVLKYFAESSPRTSAGPPGEDWRSAFDAAANGPTDYQRTSSNGHGRHYSDPAQNGEVNSGANSGSRRTPNRLPPAPPQSASGSKYF 1079
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 56530144 56543083 - BLOR01682 Blo01g01682 56122

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01682 1079 Gene3D Dynamin, middle domain 478 680 - -
Blo01g01682 1079 Coils Coil 942 962 - -
Blo01g01682 1079 CDD DLP_1 186 450 IPR001401 GO:0003924|GO:0005525
Blo01g01682 1079 MobiDBLite consensus disorder prediction 1026 1062 - -
Blo01g01682 1079 ProSiteProfiles GED domain profile. 888 981 IPR020850 -
Blo01g01682 1079 PRINTS Dynamin signature 339 355 IPR022812 -
Blo01g01682 1079 PRINTS Dynamin signature 183 201 IPR022812 -
Blo01g01682 1079 PRINTS Dynamin signature 208 225 IPR022812 -
Blo01g01682 1079 PRINTS Dynamin signature 320 338 IPR022812 -
Blo01g01682 1079 PANTHER DYNAMIN-2A 143 997 - -
Blo01g01682 1079 MobiDBLite consensus disorder prediction 654 718 - -
Blo01g01682 1079 PANTHER DYNAMIN 143 997 IPR022812 -
Blo01g01682 1079 MobiDBLite consensus disorder prediction 1002 1079 - -
Blo01g01682 1079 ProSiteProfiles PH domain profile. 719 847 IPR001849 -
Blo01g01682 1079 MobiDBLite consensus disorder prediction 773 803 - -
Blo01g01682 1079 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 459 IPR027417 -
Blo01g01682 1079 Coils Coil 145 165 - -
Blo01g01682 1079 Pfam PH domain 724 846 IPR001849 -
Blo01g01682 1079 Pfam Dynamin family 186 350 IPR045063 -
Blo01g01682 1079 MobiDBLite consensus disorder prediction 654 672 - -
Blo01g01682 1079 Pfam Dynamin central region 399 641 IPR000375 -
Blo01g01682 1079 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 209 218 IPR019762 -
Blo01g01682 1079 SMART GED_2 883 976 IPR003130 GO:0003924|GO:0005525
Blo01g01682 1079 MobiDBLite consensus disorder prediction 789 803 - -
Blo01g01682 1079 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 180 450 IPR030381 GO:0005525
Blo01g01682 1079 SMART dynamin_3 145 382 IPR001401 GO:0003924|GO:0005525
Blo01g01682 1079 SUPERFAMILY PH domain-like 720 847 - -
Blo01g01682 1079 Pfam Dynamin GTPase effector domain 886 968 IPR003130 GO:0003924|GO:0005525
Blo01g01682 1079 MobiDBLite consensus disorder prediction 673 694 - -
Blo01g01682 1079 SMART PH_update 720 849 IPR001849 -
Blo01g01682 1079 MobiDBLite consensus disorder prediction 695 709 - -
Blo01g01682 1079 Gene3D - 180 465 IPR027417 -
Blo01g01682 1079 Gene3D - 708 850 IPR011993 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01682 K01528 DNM1_3; dynamin 1/3 [EC:3.6.5.5] - csv:101220753 1509.97
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo01g01682 Blo12g00812 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00471 Blo-Chr1:5195262 Blo01g01682 Blo-Chr1:56530144 1.25E-31 dispersed
Blo01g01682 Blo-Chr1:56530144 Blo16g00754 Blo-Chr16:31196726 3.74E-07 dispersed
Blo14g00027 Blo-Chr14:177338 Blo01g01682 Blo-Chr1:56530144 1.11E-44 transposed
Blo01g01682 Blo-Chr1:56530144 Blo12g00812 Blo-Chr12:26489381 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1716 Blo01g01682 Blo12g00812 . Bda03g00360 Bpe02g00260 Bpe04g00320 Bma04g00337 Bma01g02448 . . Cma01g00877 Cma09g01291 Car01g00802 . Sed03g0698 Cpe06g00975 . Bhi04g02550 Tan11g0043 Cmetu03g0129 . Hepe02g3468 . Lcy10g2361 Cla08g00152 Cam08g0148 Cec08g0103 Cco08g0213 . Cmu08g0149 Cre08g0132 Cone4ag1154 . . . . . . Cme09g00107 . . Bda11g00922 . . . . . Sed11g1774 Cmo01g00920 Cmo09g01249 . . . Car09g01106 . Cpe02g00986 Bhi06g00143 Tan10g1858 Cmetu09g1009 . . . . Cla11g00799 Cam11g0836 Cec11g0820 Cco11g0822 Clacu11g1022 Cmu11g0885 Cre11g1279 Lsi08g00154 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001593 2 2 2 2 2 2 3 2 2 2 2 2 3 2 2 4 2 2 4 2 2 2 2 2 2 2 2 4 3 2 69
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo01g01682 Blo_Chr01 FPKM 7.392139 9.396022 1.497383 0.243346 0.41446 0.784377 0.607484 1.750132 3.039015 2.896535