Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01710 ATGGTTCCATCAGCAGACTTGTCACGACTCGAAGACGGGCCTAACAGAACCGCCGGGTCAGGCGACCCGATCCTCATAGAGAACCCGATCACCCAGCCCAATGCATCTCACCCACCGAACAGAGTCGGAATTGTCGCCGGAATCGAAAATCTGTTCGTCGTCGGAAACCAGAGTCGGGTTCGGCCTCGGAGTTGCTCCGTCACAGATCGGGAGTCGCCGTTCGCCGGAGCCGAAGGATCGGCTCAACTCGGAGTTCCGGCCGCAGATCTGGAATCGCCGGATCTGCTCGAGATCGGGAGTTTGTTGTTCGTCTGTTCGGGGAAACGGTCCTCGGCTCTCGGCCGACGTCGCACGGTCGCGGTTCGCAGCCGGAAGGGATGCCGGAAAGAATGCCGGAAACCGAGCTCCCTGTCTCGGCCGGCGTCGCCAGTTCACGGAGTTCCCGCCTGCTCGTCGTTCGCCGGTCGCTGCTGTCCGTCGACTCAGATTCTCATGGAGTTTCATCTCCTACCCATCTTAGCATTTGTCTCTCTTGCAGTGGTGGCTACCCATGCCGCCTTGTCCCCCGAGCAGTATTGGATATCTGCTCTGCCAAACACTCCAATTCCAGAATCCATTAGAGATCTTCTTATGCCTGACCTGGGAGAAGAGAAAGACACTGCTGTCGATGTCGGCAAGGGAGGTGTGCACGTTAAAACGGACAAAGGAAAGGCAGGTGGGGGAACCCAAGTGGACGTCAGCGGGAAAGGAGGCGTCGGAGTTCACACCGGACCGACTGGCGGAGGAACTGACGTTGGCGTTGGCAAAGGAGGAGTTAACGTGTACACACATCGCAAAGGAAAACCTGACATGTACGCCGGCAACAAAATCACTGCCCACTTCCCTAAAACTCCGGCCGCCGCCTCTTTCTTGCCTCGCCAAGTTGCCAAGACAGTACCCTTCTCGTCGGACAAACTCCCACAGATCTTCAATTGGTTTTCGGTGAAACCAGGATCGCCGGAAGCCGAAACGATGAAGACGACAATAAAAGATTGCGAAGCTCCGGCAATAAGAGGGGAGCAGAAGTACTGCGCAACTTCTCTAGAGTCCATGATTGACTTCGCCACTTCCAAACTCGGAAAAAATGTCGAAGCCATCTCTACAGAGGTTCAAAAAGAGACCGCAAAAGTACAGAGCTATACAATTCAAGTCGGAGTAAAGAAGGTGTCAAAGAGTGCGAAATCTGTTGTCTGCCACAGACTGAACTACGCCTATGCTGTGTTTTACTGTCACGCAACCGTAGCAACGACAGCTTATAAGGTTCCCTTGGTGGGCGCGGATGGCACAAAAGTCACTGAGGCAGCAGTTTTCCAAGAAGTTTCTGGGATCTTTGTCTATTTGAAGGAACGTCGATACCCTGACATGGTGGAAGCTGAAAGAATTGAAAATCTCGAATTTAAATGGGGTAAAAGAAGAGGAATTGGCGGGAAAAATAAAGACATAATGTTTTATGAATCTTTTACATATGACGGTGTTGACTATACACTTTATGATTCTGTTTATCTTTACGAGGATGGAGAATCAGAACCTTATGTTGGGAAACTAGTAAGAATCTGGGAGAATCCTAACAAGTCAAAAAAAGTGAAGATATTATGGTTTTTCCGTCCCTGTGAGATTGTTATTTTTCTTGGTTCTGAGGACACGCGTCATAATGAATTGTTTTTGGCATCAGGCAAAGGGATTGGTCTTGCAAATATTAATCCTTTGGAAGCAATTTGTGGAAAATGTAATGTTGTCTGCATTTCAAAAGACAGCAGAAATAAAAAACCTTCAGTCAAAGAGGTACAAATGGCTGACTTTCTTTTTTATCGCACCTTTGATGTTGGTCGCCAGAAGATTCTTGAGAAGATATGTGAGAAAATTGCTAGTATAGAAGCATCATTGGTTAGACATGTTTCTTCCCTTGGTAAGAATTATGGTCCTGGTGATGGTGTGGAAAAAGATCGAGTGAATAAAAGTCAGTATACTGCCAAAAATCATTTAAGAGCTGTTAATTCTGCAGAGAGAGTAAAATGTAGCAATGATAATGGTGAATTTTACCAAGGGCCATCAAAACTGTACCAAAGGCCTCCAAAGAAAGCCAGGACTGATGGTTCTTTTCAATTGTTTATTGACAAGAATAAAAATAGTGTACAGAAGTTATGCAATGATTCCAGGATAAACATGAATAACTCTGTAGATGTAAGTTATTCTCATGGAGCGGACAAAATCCCTGGAAGGAAGCTGGAACCAGATGAGAACCTGACAAAACTTTCTAATGTAAAGATGCCTGAAACATTGTCGCTGATTAGTTTTAATAAGCACAACAAAGTTGATAGTCGAGAAGTGGAAGTTACTAGAAGACCTGGTCCTCCTTGGGAGGAGAGACTGAAAACTGCTCGTGATCAGGGAACACTAGTTCTATTTCAGAATTTAGATCCAGATTTTACTTCAGGAGAAGTAGAGGAGGAGAAGGTATTCAAGCTTGAAGAGTTTGTGACAAAAGAAATTTTCTTGGAGGAGAGGGACCGAGTAGCGGCAGAGACAAAAAGTTTTGAGGAAAACATGGGTGGGGAAATTGCGACATCAGAAAAGGAAGAGGCGGCTGAAGAGGAAGAAATGTCAGAAAAGGAAGAGGCGGCTAAAGAGGAAGAAATGTCGGAAAAGGAAGAGGCGGCTGAAGAGGAAGAGAGTAAATTGTTTTCGCCGGTGGCAAGGGAGGAGGCAACAAAAGAAGAATTAGCCGAAAAAGGAGAAGGAGAATCAGCGGCCGAGGAGATGTGTTGCGAACAAATAGTAGAAATGGAGAAACGGGCGACGGTGGAGATGGAGGAACCGACGACGGTGAAGATGGAGTAA 2877 46.78 MVPSADLSRLEDGPNRTAGSGDPILIENPITQPNASHPPNRVGIVAGIENLFVVGNQSRVRPRSCSVTDRESPFAGAEGSAQLGVPAADLESPDLLEIGSLLFVCSGKRSSALGRRRTVAVRSRKGCRKECRKPSSLSRPASPVHGVPACSSFAGRCCPSTQILMEFHLLPILAFVSLAVVATHAALSPEQYWISALPNTPIPESIRDLLMPDLGEEKDTAVDVGKGGVHVKTDKGKAGGGTQVDVSGKGGVGVHTGPTGGGTDVGVGKGGVNVYTHRKGKPDMYAGNKITAHFPKTPAAASFLPRQVAKTVPFSSDKLPQIFNWFSVKPGSPEAETMKTTIKDCEAPAIRGEQKYCATSLESMIDFATSKLGKNVEAISTEVQKETAKVQSYTIQVGVKKVSKSAKSVVCHRLNYAYAVFYCHATVATTAYKVPLVGADGTKVTEAAVFQEVSGIFVYLKERRYPDMVEAERIENLEFKWGKRRGIGGKNKDIMFYESFTYDGVDYTLYDSVYLYEDGESEPYVGKLVRIWENPNKSKKVKILWFFRPCEIVIFLGSEDTRHNELFLASGKGIGLANINPLEAICGKCNVVCISKDSRNKKPSVKEVQMADFLFYRTFDVGRQKILEKICEKIASIEASLVRHVSSLGKNYGPGDGVEKDRVNKSQYTAKNHLRAVNSAERVKCSNDNGEFYQGPSKLYQRPPKKARTDGSFQLFIDKNKNSVQKLCNDSRINMNNSVDVSYSHGADKIPGRKLEPDENLTKLSNVKMPETLSLISFNKHNKVDSREVEVTRRPGPPWEERLKTARDQGTLVLFQNLDPDFTSGEVEEEKVFKLEEFVTKEIFLEERDRVAAETKSFEENMGGEIATSEKEEAAEEEEMSEKEEAAKEEEMSEKEEAAEEEESKLFSPVAREEATKEELAEKGEGESAAEEMCCEQIVEMEKRATVEMEEPTTVKME 958
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 56856213 56866877 + BLOR01710 Blo01g01710 56150

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01710 958 MobiDBLite consensus disorder prediction 886 933 - -
Blo01g01710 958 PANTHER PROTEIN ANTI-SILENCING 1 468 835 - -
Blo01g01710 958 Coils Coil 866 905 - -
Blo01g01710 958 Pfam BAH domain 507 617 IPR001025 GO:0003682
Blo01g01710 958 Pfam BURP domain 283 449 IPR004873 -
Blo01g01710 958 MobiDBLite consensus disorder prediction 855 933 - -
Blo01g01710 958 MobiDBLite consensus disorder prediction 1 24 - -
Blo01g01710 958 Gene3D - 475 628 IPR043151 -
Blo01g01710 958 MobiDBLite consensus disorder prediction 871 885 - -
Blo01g01710 958 ProSiteProfiles BURP domain profile. 278 449 IPR004873 -
Blo01g01710 958 MobiDBLite consensus disorder prediction 227 265 - -
Blo01g01710 958 SMART BURP_2 281 484 IPR004873 -
Blo01g01710 958 SMART BAH_4 505 631 IPR001025 GO:0003682
Blo01g01710 958 ProSiteProfiles BAH domain profile. 505 630 IPR001025 GO:0003682
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01710 - - - cit:102618521 323.939
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01710 Blo-Chr1:56856213 Blo14g00326 Blo-Chr14:3357621 2.78E-61 dispersed
Blo12g00195 Blo-Chr12:12762962 Blo01g01710 Blo-Chr1:56856213 1.13E-09 dispersed
Blo16g01157 Blo-Chr16:40094567 Blo01g01710 Blo-Chr1:56856213 2.30E-06 dispersed
Blo13g00557 Blo-Chr13:27543659 Blo01g01710 Blo-Chr1:56856213 4.27E-28 transposed
Blo01g01710 Blo-Chr1:56856213 Blo12g00797 Blo-Chr12:26366569 1.09E-160 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g342 Blo01g01710 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Chy04g00273 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cme04g00305
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004249 3 2 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 2 1 1 2 1 2 43
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo01g01710 Blo_Chr01 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0