Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01723 ATGGGTCGAAAGAAGCCGACTGCTCTGGAGGATGATGTGCCTGCCCCGGCTCAGGGAGGGGGTAAAGCAAAGAAGAAAGCGCTTTTAATAGACGACGACGAATATTCTATTGGAACAGAAATATCTGAGGAGTCGCAAGTGCAGGAGGAGACGGTTGTATCCACAGGGAAGAAGAAGGGTAGAAAGGGTAACTTGAAACCTTCACAATTAAAAGACGATGAAGAGGACGATGATTTTGTGCCGGAGATTGCTATCACTGGGAAAAAGAAGGGAAAATCAAAGAAGGGTGGTGGAAACAATGTGTTTAGTGCATCAAGCTTTGGGTTGCTTGAGGAGGAAAAAAATGTGGATGATGATGATGATGAACAAGATGAAGATGAGATTGTGCCAGTTATTACTTTAACCGGAAAGAAGAAGCCATCCAAAGGTGGAAAGACAAGTAGGAGTACATTTCAAGCTTCAAATTTTGGTGGGCTAGATGATGAGGATGATGATAACGATGAAAAGAAAGATGTGGATGAAGATATTGCTCCTATTAGTTTCTCTGGTTTGAAAAAGAAGTCTTCCAATGCAACAAAGAGGAGTGGTAATCTTTTTGGTTCAGCATTTGTTGACGATGCTGGTGATGAAGGTCCTTCTGTATCAGAATCAAGCAGAGCTGGTGATGATCTCGTTGAGGATGAAGATGCCTCAGTTATTGCATTTTCCGGCAAGAAAAAATCCTCAAAGAAGAAAAGTAATAGTGTTTTTTCTTCATTGGATGACACGAGTGCACTTGAAAGTGGAGTTGAACCTGAAGTACTGAGTGGTGGATCTAGTCATGTTGATGGTGAAACCTCTGTGACCAACATGAAAGAGGTTGCAGAGACTTCAAAAAATAAGAAAAAGAAGAAGAAGAGTGGAAGAACTGCTCAAGAGGAAGATGATTTGGATAAGATTCTTGCAGAGCTCGGTGAGGGACTGGCAGTACCAAAATCTGTTGCATCTGCTTCTCTTCCTCCAGAAGAGATGAAATCCGATGTTCAACCTGAACCAGCTCTGCTTGTTGATGCGTCTGCGGAGAAGGAAGGTGAAGAAGAAATTATGGAGTCGGCTGCAGCAAAGAAGAAGAAAAAGAAGAAGGAGAAGGAGAAGGAAAAGAAGGCAGCTGCAGCAGCTGCAGATGAGAAGGCTGAAATAACTGAAGAAGTAAAAATTGGGATAGCAGAGCCTAAAAAGGGAACCGCTAAGAGTAAAGTTCCTGAGAAGAAAGTTCCAAAGCATGTTAGGGAAATGCAGGAGGCAATGGCGAGGAGAAAAGAAGAGGAAGAAAGGAAAAAGAGGGAAGAAGAAGAGAAGTTGAGGAGGGAAGAGGAGGAAAGGCTTAGGCAAGAGGAACTTGAGAGGCAAGCAGAAGAAGCAAAGCGAAGGAAGAAGGAAAAAGAAAAGGAGAAGCTTCAGAGGAAAAAATTGGAAGGAAAGCTTTTAACGGGGAAGCAAAAGGAAGAACAGCGTAGGTTACAGGCAATGAAGAACCAATTTCTTGCAAATGGTGTGGATTTACCTCTTCCTGCTGCTGACTCTGGTGCACCAATGAAACGACCCATTTATAAGACAAAGAAGACCAAAACAGCCCAACATCAAACAAGTAGCGATGCATCTAAGGTGGTTGAGAACATAGAACAAATGAAAAATCAGCTAGACCATGTGGCAGAGGTTGAATCTGTAGAGTGGAAAAAGATGGAAGATGTGGAAACAATGAATGTGGATGAGAAATCTGAAATTTCTGAGCCTGTAGAAAATAATGGGATGGAAGAAGAAGATGACGACGAGGACGAATGGGATGCAAAGAGCTGGGATGATGCTGTTGTTGATCTTACGGTTAAAAGTGCATTTGCTCATGAAGAAATTGACTCTGAACCAGAACTCGTGGTGAAAAAAGAGAAAAAGAGTGGCACACCAATTTCTGACCTAGCAGCTACAAATGTTGGCAGCCAACCAGCTCTTTTTGTCAACCAAAGCTTTTCTTCTAAGGACGTTGAAGTTAGAAAAAAGCAGTCTGAGGTGGAAGTTGTGGATAATAACAAAAGAAAAAATGCTGTTGTTAAGAAGGAAGCTCCAAGATTAGATACTGCGTCTAAAAATGGTGAAAGTAATCTCCGTTCTCCTATTTGCTGTATTATGGGTCACGTTGATACTGGTAAAACCAAGCTTCTGGATTGTATCCGAGGAACTAATGTTCAAGAAGGTGAGGCTGGAGGTATTACCCAACAAATTGGAGCGACTTATTTTCCTGCAGAAAACATACGTGAAAGAACTAGAGAATTGAAAGCAGATGCAACTTTGAAAGTTCCTGGTCTACTTGTTATTGATACCCCTGGACATGAATCTTTCACCAACCTACGGTCCCGTGGTTCTGGTTTATGTGATATTGCAATTTTAGTTGTTGACATCATGCATGGTTTAGAGCCGCAAACAATAGAATCACTCAATTTATTGAAAATGAGGAACACAGAATTCATTGTTGCACTGAATAAGGTGGATAGACTGTATGGGTGGAAAACATGTCGAAATGCTCCAATTGTGAAGACATTGAAGCAGCAATCCAAGGACGTGCAGAATGAGTTTAATATGAGGCTCACACAGATTATCACTCAATTCAAAGAACAAGGTTTAAATACTGAATTATACTATAAAAATAGAGAAATGGGGGAAACTTTCAGTATAGTACCAACAAGTGCTATAAGTGGGGAGGGTATTCCAGATTTGTTATTACTACTGGTCCAGTGGTCTCAGAAAACTATGGTTGAAAAGCTTACTTACAGTGATGAAGTGCAGTGTACGGTGTTGGAGGTCAAGGTGGTTGAAGGCCATGGGACAACCATCGATGTTGTATTAGTCAATGGTGTGCTTCATGAAGGAGATCAAATAGTTGGTCCAATTGTTACTTCAATTCGGGCACTATTGACACCACATCCAATGAAGGAACTCCGAGTTAAGGGCACATATCTGCATCATAAGCAAATTAAGGCTGCCCAAGGCATTAAGATTACAGCACAGGGCCTTGAGCATGCTATTGCCGGAACTGGTCTTTATGTAGTTGGTCCCCGCGATGACTTGGAAGACATTAAAGAATCAGCCATGGAAGATATGAAGTCAGTCTTGAGTAGGATTGACAAGAGTGGCGAAGGGGTTTGTGTGCAAGCATCGACACTGGGTTCGTTGGAAGCATTGCTGGAGTTTTTGAAGTCTCCTGCTGTTAGCATTCCTGTCAGTGGAATAAGCATTGGTCCTGTACATAAAAAAGATGTTATGAAGGCCAGTGTGATGCTTGAAAAGAAGAAGGAATATGCCACTATCTTGGCTTTTGATGTCAAAGTGACACCAGAGGCTCGTGAGCTTTCTGATGAACTGGGTGTGAAGATTTTTATTGCGGACATCATTTATCACTTGTTTGATCAGTTTAAGGCATACATTGACAATATTAAAGAGGAAAAGAAGAAAGAAGCTGCTGAGGAAGCAGTATTTCCATGTGTCCTTAAGATTCTACCAAATTGTATTTTCAATAAGAAGGATCCAATCGTCTTGGGAGTGGATGTACTTGAAGGCATTGCGAAGTTGATCCATCTTTTCTTAAATGAAATTTTATTGGTTGGAACTCCTATTTGCATTCCTCAAAGAGAGTTTATTGATATTGGCCGCATCGCATCTATTGAAAACAACCATAAACCTGTTGATACAGCAAAGAAAGGACAGAAAGTAGCCATTAAGATAGTTGGCTCTTCTGCAGAGGAGCAGCAAAAGATGTTTGGTAGGCATTTTGAGCTCGAAGATGAACTTGTTAGTCATATCTCAAGGAAATCAATAGATCTCCTCAAACTCAATTATCGGGATGATTTGTCCATCGAGGAGTGGAGGCTGGTGGTGAAATTGAAGAGTCTTTTCAAGATACAATGA 3936 41.31 MGRKKPTALEDDVPAPAQGGGKAKKKALLIDDDEYSIGTEISEESQVQEETVVSTGKKKGRKGNLKPSQLKDDEEDDDFVPEIAITGKKKGKSKKGGGNNVFSASSFGLLEEEKNVDDDDDEQDEDEIVPVITLTGKKKPSKGGKTSRSTFQASNFGGLDDEDDDNDEKKDVDEDIAPISFSGLKKKSSNATKRSGNLFGSAFVDDAGDEGPSVSESSRAGDDLVEDEDASVIAFSGKKKSSKKKSNSVFSSLDDTSALESGVEPEVLSGGSSHVDGETSVTNMKEVAETSKNKKKKKKSGRTAQEEDDLDKILAELGEGLAVPKSVASASLPPEEMKSDVQPEPALLVDASAEKEGEEEIMESAAAKKKKKKKEKEKEKKAAAAAADEKAEITEEVKIGIAEPKKGTAKSKVPEKKVPKHVREMQEAMARRKEEEERKKREEEEKLRREEEERLRQEELERQAEEAKRRKKEKEKEKLQRKKLEGKLLTGKQKEEQRRLQAMKNQFLANGVDLPLPAADSGAPMKRPIYKTKKTKTAQHQTSSDASKVVENIEQMKNQLDHVAEVESVEWKKMEDVETMNVDEKSEISEPVENNGMEEEDDDEDEWDAKSWDDAVVDLTVKSAFAHEEIDSEPELVVKKEKKSGTPISDLAATNVGSQPALFVNQSFSSKDVEVRKKQSEVEVVDNNKRKNAVVKKEAPRLDTASKNGESNLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTRELKADATLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEPQTIESLNLLKMRNTEFIVALNKVDRLYGWKTCRNAPIVKTLKQQSKDVQNEFNMRLTQIITQFKEQGLNTELYYKNREMGETFSIVPTSAISGEGIPDLLLLLVQWSQKTMVEKLTYSDEVQCTVLEVKVVEGHGTTIDVVLVNGVLHEGDQIVGPIVTSIRALLTPHPMKELRVKGTYLHHKQIKAAQGIKITAQGLEHAIAGTGLYVVGPRDDLEDIKESAMEDMKSVLSRIDKSGEGVCVQASTLGSLEALLEFLKSPAVSIPVSGISIGPVHKKDVMKASVMLEKKKEYATILAFDVKVTPEARELSDELGVKIFIADIIYHLFDQFKAYIDNIKEEKKKEAAEEAVFPCVLKILPNCIFNKKDPIVLGVDVLEGIAKLIHLFLNEILLVGTPICIPQREFIDIGRIASIENNHKPVDTAKKGQKVAIKIVGSSAEEQQKMFGRHFELEDELVSHISRKSIDLLKLNYRDDLSIEEWRLVVKLKSLFKIQ 1311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 56962741 56969937 - BLOR01723 Blo01g01723 56163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01723 1311 Pfam Translation-initiation factor 2 1036 1149 IPR023115 -
Blo01g01723 1311 PRINTS GTP-binding elongation factor signature 781 791 IPR000795 GO:0003924|GO:0005525
Blo01g01723 1311 PRINTS GTP-binding elongation factor signature 717 730 IPR000795 GO:0003924|GO:0005525
Blo01g01723 1311 PRINTS GTP-binding elongation factor signature 797 808 IPR000795 GO:0003924|GO:0005525
Blo01g01723 1311 PRINTS GTP-binding elongation factor signature 833 842 IPR000795 GO:0003924|GO:0005525
Blo01g01723 1311 Coils Coil 418 487 - -
Blo01g01723 1311 MobiDBLite consensus disorder prediction 38 311 - -
Blo01g01723 1311 Gene3D - 1050 1156 IPR036925 -
Blo01g01723 1311 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 713 999 IPR027417 -
Blo01g01723 1311 TIGRFAM small_GTP: small GTP-binding protein domain 718 842 IPR005225 GO:0005525
Blo01g01723 1311 MobiDBLite consensus disorder prediction 351 370 - -
Blo01g01723 1311 MobiDBLite consensus disorder prediction 593 607 - -
Blo01g01723 1311 MobiDBLite consensus disorder prediction 183 197 - -
Blo01g01723 1311 CDD IF2_eIF5B 716 926 - -
Blo01g01723 1311 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 1 1311 IPR015760 -
Blo01g01723 1311 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 713 929 IPR000795 GO:0003924|GO:0005525
Blo01g01723 1311 Coils Coil 355 396 - -
Blo01g01723 1311 MobiDBLite consensus disorder prediction 1 26 - -
Blo01g01723 1311 MobiDBLite consensus disorder prediction 378 497 - -
Blo01g01723 1311 PANTHER PHOTOSYSTEM II PROTEIN D1 1 1311 - -
Blo01g01723 1311 CDD aeIF5B_II 937 1042 - -
Blo01g01723 1311 MobiDBLite consensus disorder prediction 574 607 - -
Blo01g01723 1311 MobiDBLite consensus disorder prediction 574 592 - -
Blo01g01723 1311 Gene3D - 707 935 IPR027417 -
Blo01g01723 1311 Gene3D Translation factors 936 1049 - -
Blo01g01723 1311 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 1033 1162 IPR036925 -
Blo01g01723 1311 MobiDBLite consensus disorder prediction 113 128 - -
Blo01g01723 1311 SUPERFAMILY Translation proteins 1167 1310 IPR009000 -
Blo01g01723 1311 CDD IF2_aeIF5B_IV 1171 1277 - -
Blo01g01723 1311 Pfam Elongation factor Tu GTP binding domain 717 923 IPR000795 GO:0003924|GO:0005525
Blo01g01723 1311 MobiDBLite consensus disorder prediction 273 287 - -
Blo01g01723 1311 Gene3D Translation factors 1163 1311 - -
Blo01g01723 1311 MobiDBLite consensus disorder prediction 351 497 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01723 Blo-Chr1:56962741 Blo18g00546 Blo-Chr18:7706004 1.89E-28 dispersed
Blo01g01723 Blo-Chr1:56962741 Blo12g00791 Blo-Chr12:26301200 3.10E-179 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01723 K03243 - csv:101204360 1504.96