Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01724 ATGGATCACGCAGCGGATGCGATGAGGACGGATTTGATGACTATTACTCGCTTCGTTTTGAACGAGCAATCGAAACACCCGGACTCTCGCGGAGACTTCACCATTTTGCTCAATCATATTGTTCTTGGCTGCAAGTTCGTCTGCTCTGCTGTCAACAAGGCGGGTCTTGCAAAACTAATTGGATTAGCTGGTGAAACCAATGATTTGTACTCCCCTTCCTCTCTTCAGGGTGAAGAACAAAAGAAGCTAGATGTTCTATCCAATGAAGTTTTTATTAAGGCTTTGGTTAGCAGTGGGCGAACATGCATCCTTGTTTCCGAAGAAGATGAAGAGGCAACATTTGTGGATCCCTCTCTGCGAGGAAGGTACTGTGTGGTTTTTGATCCACTGGATGGATCCTCCAACATTGATTGTGGTGTTTCCATCGGAACGATATTTGGGATTTACCATGCGAAAGATAGTGCTCAACCTACCTTAGATGACGTTTTGCAACCTGGAAAAAATATGGTAGCAGCCGGGTATTGCATGTATGGAAGCTCCTGCAATCTTGTTTTAAGTACTGGAACTGGTGTACATGGATTCACTCTTGATCCTTCTCTGGGAGAGTTCATTCTGACTCACCCGGACATAAAGATTCCAAAAAAAGGAAAGATCTATTCAGTAAATGAAGGAAATGCAAAGAACTGGGATGGCCCTACAGCCAAGTTTGTGGAAAAGTGCAAATTTCCTATAGATGGATCATCACCAAAGTCCCTACGGTACATTGGAAGCATGGTAGCTGATGTTCATCGCACACTGCTTTATGGAGGTATCTTCTTGTACCCTGCTGATAAGAAGAGCCCAAACGGGAAACTGCGTGTTCTCTACGAAGTTTTTCCAATGTCATTTTTGATGGAGCAAGCAGGAGGTCAGGCCTTCACTGGGAAGCAAAGGGCACTGGACATGGTTCCTAAAAAGATACACGAGAGATCGCCCATATTTCTTGGCAGCTATGACGAAGTGGAGGCCATCAAAGCACTCTATGCTGCCGAAGGGAACTAA 1041 44.86 MDHAADAMRTDLMTITRFVLNEQSKHPDSRGDFTILLNHIVLGCKFVCSAVNKAGLAKLIGLAGETNDLYSPSSLQGEEQKKLDVLSNEVFIKALVSSGRTCILVSEEDEEATFVDPSLRGRYCVVFDPLDGSSNIDCGVSIGTIFGIYHAKDSAQPTLDDVLQPGKNMVAAGYCMYGSSCNLVLSTGTGVHGFTLDPSLGEFILTHPDIKIPKKGKIYSVNEGNAKNWDGPTAKFVEKCKFPIDGSSPKSLRYIGSMVADVHRTLLYGGIFLYPADKKSPNGKLRVLYEVFPMSFLMEQAGGQAFTGKQRALDMVPKKIHERSPIFLGSYDEVEAIKALYAAEGN 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 56974446 56977469 + BLOR01724 Blo01g01724 56164

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01724 346 Pfam Fructose-1-6-bisphosphatase, C-terminal domain 212 341 IPR044015 -
Blo01g01724 346 ProSitePatterns Fructose-1-6-bisphosphatase active site. 283 295 IPR020548 GO:0005975|GO:0042578
Blo01g01724 346 PRINTS Fructose-1,6-bisphosphatase signature 38 65 IPR028343 GO:0042132
Blo01g01724 346 PRINTS Fructose-1,6-bisphosphatase signature 162 185 IPR028343 GO:0042132
Blo01g01724 346 PRINTS Fructose-1,6-bisphosphatase signature 193 216 IPR028343 GO:0042132
Blo01g01724 346 PRINTS Fructose-1,6-bisphosphatase signature 82 108 IPR028343 GO:0042132
Blo01g01724 346 PRINTS Fructose-1,6-bisphosphatase signature 219 246 IPR028343 GO:0042132
Blo01g01724 346 PRINTS Fructose-1,6-bisphosphatase signature 317 342 IPR028343 GO:0042132
Blo01g01724 346 PIRSF FBPtase_SBPase 9 346 IPR000146 GO:0005975|GO:0016791
Blo01g01724 346 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE-RELATED 2 344 IPR000146 GO:0005975|GO:0016791
Blo01g01724 346 Gene3D - 4 210 - -
Blo01g01724 346 Hamap Fructose-1,6-bisphosphatase class 1 [fbp]. 13 343 IPR000146 GO:0005975|GO:0016791
Blo01g01724 346 CDD FBPase 20 341 IPR000146 GO:0005975|GO:0016791
Blo01g01724 346 PIRSF FBPtase 9 346 IPR028343 GO:0042132
Blo01g01724 346 SUPERFAMILY Carbohydrate phosphatase 7 341 - -
Blo01g01724 346 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE, CYTOSOLIC-LIKE 2 344 - -
Blo01g01724 346 Gene3D - 211 346 - -
Blo01g01724 346 Pfam Fructose-1-6-bisphosphatase, N-terminal domain 13 208 IPR033391 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01724 K03841 FBP, fbp; fructose-1,6-bisphosphatase I [EC:3.1.3.11] - tcc:18592577 632.869
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01724 Blo-Chr1:56974446 Blo12g00399 Blo-Chr12:20959153 8.40E-72 dispersed
Blo01g01724 Blo-Chr1:56974446 Blo09g00253 Blo-Chr9:11371767 1.59E-102 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1386 Blo01g01724 . . . . . . Bma01g02503 . . . . Car01g00893 . . Cpe06g00880 . . . . . . . . Cla08g00367 Cam08g0791 Cec08g0351 Cco08g0459 Clacu08g0504 . Cre08g0333 . . . Cone20ag0383 . . . . . . Bda11g00878 . . . . . . Cmo01g01050 . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008203 1 1 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 1 1 1 1 1 0 1 1 1 1 3 1 1 34
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo01g01724 Blo_Chr01 FPKM 0.866084 0.0 1.064015 1.026537 0.365834 0.638959 0.186662 1.965638 1.126513 1.462677