Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01727 ATGGAGGGTGATTCTACAGTCTTTGAAGTCTCCGGCGAGGCGGTGGCTGCGCCACCGGAAGTTGCAGCAGGGGGGTCGAATTCCGGGGACGAAGATAAGAGCAGAGATGATGAAGGGGAGAAGAATTACGGAGGAAATCGCTGGCCTCGACAAGAAACATTGGCTTTGTTGAAGATTCGCTTCGATATGGATTCGGTTTTTCGTGATTCAACTCTTAAAGGTCCTTTGTGGGAAGATGTCTCAAGGAAGCTAGGAGAGCTTGGGTACAGTAGAAGTGCAAAGAAATGCAAAGAGAAGTTCGAAAATGTATACAAGTATCACAAGAGGACTAAAGAAGGAAAAAGTGGGAAAAAATCAGAAGGTAAAACCTATCGATTTTTCAATGAAATTGAAGCTCTTGAGAATCTTCACCCTCCTCAACAATGTCTTCCCAAACCTCAACCACCGCTCACAATTCTGCCGCCATGGACGACTGTCCCTTCCTCGCATTTTCATCAGTCTTTTCCAGTTCCCTCCCCCTCCACCCCCACCACCACATTACCAAAGCCTTTGAATTCAAATTTCCCACCTCCTCAATCAAACCTTATCAACAATTTTTCGCGAAACTTAGCCCCGAAAAATGGGAATTTTCTTTTCTCGAGCTCAACTTCGTCTTCGACTGCTTCAGATGAGGAGCTCGGGGGGAGACGGAAGAGGAAGAGGAAGTGGAAGGACTTCTTTAGGAGGATGGCTGAGGAGGTTATGGCCAAACAAGAGGGCTTGCAGATGAAATTCTTGGAAGCGTTGGAGAAAATAGAACACCAAAGAATTGTTAGAGAAGAGAGTTGGAGAATTCAAGAAATGGCGAGAATTAACAAAGAACATGATATTTTAGTCCGAGAGATTTCCACTGCAACAGAAAAAGATGCAGCTATGGTTTCATTTTTGCAAAAGCTCATGTCTGCTCAGCCGGATCAAACCCAATCAAAGGGAACTCCACTTTCATTGCCTCCATTGTTACAACCTCCTCCCCCTCCTGCAATTCCACCGTCTAATTTGGATATCAAAAGGATCGAAGATGGCGGAAATTCGACACCCTTATCCACCTCAAGATGGCCGAAAGTAGAAGTTCAAGCTCTGATAAGCCTTAGAACAGGTCTTGATATGAAATATCAAGAAAATATACCAAAAGGGCCACTGTGGGAGGACATTTCAATGGCGATGAAAAAGCTCGGATACAATAGAAGCTCTAAGAGATGCAAAGAGAAATGGGAGAATATAAACAAGTACTTCAAAAAAGTGAAGGAAAGCAACAGGAAAAGGACTGATGATTCAAAGACTTGCCCATATTTTCAGCAACTTGATGTGTTGTATAGGGAGAAGAAGAAAACGGAAAGCTCATTCATTCCACAAATGCTGCCGTTGATGGTCCCACCAGAGCAACAATGGCCTCTTCCACAACAAAAACAGCTAAACAGTGAAATAGAAAATGGGCAACATAATCAAGTAGGAGAAAAACAAGAAGAAGAGGAAGAGGAGGAAGCAGAAGCAGAAGCAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGTCAGTGAAGAAGATACTGAAGGTGGCGGCTTTCATATTGTCACAAACAAATCATCTTCCACGAACGCTGTCAATTGA 1650 43.45 MEGDSTVFEVSGEAVAAPPEVAAGGSNSGDEDKSRDDEGEKNYGGNRWPRQETLALLKIRFDMDSVFRDSTLKGPLWEDVSRKLGELGYSRSAKKCKEKFENVYKYHKRTKEGKSGKKSEGKTYRFFNEIEALENLHPPQQCLPKPQPPLTILPPWTTVPSSHFHQSFPVPSPSTPTTTLPKPLNSNFPPPQSNLINNFSRNLAPKNGNFLFSSSTSSSTASDEELGGRRKRKRKWKDFFRRMAEEVMAKQEGLQMKFLEALEKIEHQRIVREESWRIQEMARINKEHDILVREISTATEKDAAMVSFLQKLMSAQPDQTQSKGTPLSLPPLLQPPPPPAIPPSNLDIKRIEDGGNSTPLSTSRWPKVEVQALISLRTGLDMKYQENIPKGPLWEDISMAMKKLGYNRSSKRCKEKWENINKYFKKVKESNRKRTDDSKTCPYFQQLDVLYREKKKTESSFIPQMLPLMVPPEQQWPLPQQKQLNSEIENGQHNQVGEKQEEEEEEEAEAEAEEEEEEEEEEEEVSEEDTEGGGFHIVTNKSSSTNAVN 549
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 57005910 57008029 - BLOR01727 Blo01g01727 56167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01727 549 Coils Coil 493 531 - -
Blo01g01727 549 MobiDBLite consensus disorder prediction 1 47 - -
Blo01g01727 549 Pfam Myb/SANT-like DNA-binding domain 363 449 IPR044822 -
Blo01g01727 549 Pfam Myb/SANT-like DNA-binding domain 46 133 IPR044822 -
Blo01g01727 549 ProSiteProfiles Myb-like domain profile. 40 104 IPR001005 -
Blo01g01727 549 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-2 21 532 - -
Blo01g01727 549 MobiDBLite consensus disorder prediction 481 549 - -
Blo01g01727 549 CDD GT1 46 111 - -
Blo01g01727 549 CDD GT1 363 428 - -
Blo01g01727 549 ProSiteProfiles Myb-like domain profile. 357 421 IPR001005 -
Blo01g01727 549 PANTHER - 21 532 - -
Blo01g01727 549 MobiDBLite consensus disorder prediction 29 45 - -
Blo01g01727 549 MobiDBLite consensus disorder prediction 210 232 - -
Blo01g01727 549 Gene3D - 48 109 - -
Blo01g01727 549 Gene3D - 365 426 - -
Blo01g01727 549 SMART sant 361 423 IPR001005 -
Blo01g01727 549 SMART sant 44 106 IPR001005 -
Blo01g01727 549 MobiDBLite consensus disorder prediction 500 529 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g01727 Blo12g00788 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01727 Blo-Chr1:57005910 Blo12g00787 Blo-Chr12:26264497 0 dispersed
Blo01g01726 Blo-Chr1:56990659 Blo01g01727 Blo-Chr1:57005910 4.22E-135 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11952 PF13837 Myb_DNA-bind_4 5.40E-20 CL0123 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01727 - - zju:107421675 478.789