Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01731 ATGGCCGAGGAGAAGCTCCACGAACTCTTCCACCACAAGAAGGACGACGAGGACACCGTCGTCGACTACGAGAAGGAGGAGAAGCACCACAAGCATCTCGAACATCTCGGCGAGCTCGGCACCGCCGCCGCCGGAGCTTTTGCCTTGCACGAGAAGCACGAGGTGAAGAAAGATCCGGAGCACGGCCACAGGCATAAGATAGAAGAAGAAATAGCGACGACTGTGGCGGCTGGGTCGGGAGGGTACGCATTCCATGAGCGCCACGAGAGGAAGGAGGCAAAGGAAGAAGACGAAGAGGCTCATGGAAAGAAGCACCACCTCTTTTAA 327 56.88 MAEEKLHELFHHKKDDEDTVVDYEKEEKHHKHLEHLGELGTAAAGAFALHEKHEVKKDPEHGHRHKIEEEIATTVAAGSGGYAFHERHERKEAKEEDEEAHGKKHHLF 108
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 57030286 57030689 + BLOR01731 Blo01g01731 56171

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01731 108 MobiDBLite consensus disorder prediction 84 108 - -
Blo01g01731 108 Pfam ABA/WDS induced protein 22 99 IPR003496 -
Blo01g01731 108 PANTHER ABSCISIC STRESS-RIPENING PROTEIN 5 4 106 - -
Blo01g01731 108 PANTHER ABSCISIC STRESS-RIPENING PROTEIN 5 4 106 IPR003496 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01731 - - - egr:104444686 143.28
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo01g01731 Blo12g00782 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01731 Blo-Chr1:57030286 Blo01g01733 Blo-Chr1:57038721 4.06E-42 dispersed
Blo01g01731 Blo-Chr1:57030286 Blo01g01732 Blo-Chr1:57033125 1.60E-42 tandem
Blo01g01731 Blo-Chr1:57030286 Blo12g00782 Blo-Chr12:26227288 4.40E-52 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1361 Blo01g01731 Blo12g00782 . . . . Bma04g00376 Bma01g02510 . . . . . . . . . . . . . . . . . . . . . . . Cone4ag1489 Cone7ag1455 . . . . . . . . Bda11g00871 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0018061 1 0 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo01g01731 Blo_Chr01 FPKM 31.642157 29.340258 53.001328 46.660892 11.456191 17.671234 13.791945 1.923186 4.108249 1.406448