Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01734 ATGGAGTACCGGATCCGGTCCGGTACTACCGGAACTGGTTCTACCCGGTACCGGTCCTCGTCAACGGCTATGGCGGTGAGGCTTATGCGTGCAGTTCAGTACGAAGGCTACGGTGGAAGAGCAGCTGGGCTGAAGAACCAGACCGGAACCGGTCTTCTTTTGGACCGGTACCGGTCTTCAAAAAAGAAGAACCGGTACCGCCGGTCCAGTGCTGGACCGCTGTACAATCGGACTGGACCGTTTTGGTTTTGGTTCCGGTTCATCATTCTTGAAACCGAGAACCGAATGATCGGTTCTAAGAGATCTGGAACCGAAACTGAGAACCGATTTAAATCATGGTTCGGAACCGAAACCAAACTGGAACCGAGATTCGGATCCGATTCCGGGTCTGGTTCCGATTCCTTACTGTTGGAACTGATAACCGAATGGTTGGTTCCAAGAGGTCGACTCATTGCTGGTTCTCACAATAGAAATGAGTTTGTTCTCATCAACGCTGATGAGGTTGCTAGAGTCACTTCTGTCAAGGAGCTAAGTGGGCAAATTTGCCAGATCTGTGGAGATGAGATAGAGTTTACAGTCGATGGTGAGCCGTTTGTTGCCTGCAATGAATGTGCATTTCCAGTCTGTAGACCTTGCTATGAGTATGAAAGAAGGGAGGGAAATCAAGCCTGCCCTCAATGCAAAACTCGATATAAACGAATCAAAGGGTCTCCTCGAGTCGAAGGTGACGAAGAGGAAGACGGTGTGGATGATTTGGAGAATGAGTTTGATATCTCCAGCGATCCTCACTACATTGCTGAGCAAATGCTTTCTTCTCACCTTAATGTGGGCAGAGGCTCTCAAATAAATGGAAATCACATGTCTTCGGAATTGGATGCTTCTTCCCCTCCTATGAACATTCCCCTCCTCACCTATGACCAAGAGGATGCTGGAATTTCTTCCGACAAACATGCTCTCATCATTCCACCTTTTATGAGCCGGGGAAAGAGGGTTCATCCTATGCCGTATGCTGATAATTCTGTGACTGTTCAACCAAGGCCAATGGATCCTAAGAAAGATTTAGCTGTTTATGGATATGGAACTGTTGCATGGAAAGAAAGAATGGAGGAGTGGAAGAGGAAACAGAACGAAAAACTACAGGTCGTGAAGCATGAAGGAGATGGTGGAAACGAGTTCGATGATCCAGATTTGCCCATGATGGATGAAGGGAGACAACCTCTGTCTAGGAAATTGCCAATATCTTCAAGCAAGATAAACCCATACAGGATGATAATATTACTTCGTATCGTTATCCTTGGCCTGTTCTTCCATTATCGAATTCTCCATCCTGTCAATGATGCCTATGGATTGTGGCTAACTTCTGTTATCTGTGAGATATGGTTTGCTGCGTCATGGATATTGGATCAGTTCCCTAAATGGTGCCCCATTGTACGAGAAACTTACCTCGATCGCCTCTCACTCAGGTACGAAAAAGAAGGAAAGCCATCTGAGTTAGGTTCGGTAGATGTATTTGTGAGTACGGTGGATCCTATGAAAGAACCTCCACTTATCACAGCCAACACAGTCTTGTCCATACTCGCTGTCGATTATCCTGTCGATAAAGTTGCCTGCTATGTTTCTGATGATGGTGCTGCCATGCTTACATTCGAAGCCCTCTCCGAAACATCAGAATTTGCGAGAAAGTGGGTGCCCTTCTGCAAGAAGTTTACCATCGAGCCTAGGGCCCCGGAATGGTACTTCGCCCAGAAGGTTGACTATTTGAAAGATAAAGTCGATCCAGCGTTTATTCGAGAAAGACGTGCAATTAAGAGAGATTACGAAGAATTCAAAGTTCGTATCAATTCATTAGTTGCAATGGCGCAGAAGGTTCCGGAAGATGGGTGGACGATGCAAGATGGAACTCCATGGCCTGGAAACAATGTTAGGGATCATCCCGGAATGATCCAGGTTTTTCTTGGTCAGAATGGTGTTTGTGACGTGGAAGGAAATGAATTACCTCGCCTTGTTTATGTATCCCGAGAGAAGAGACCAGGGTTTGATCATCATAAAAAGGCTGGTGCCATGAATGCATTGGTCCGAGTCTCTGCAATTATCTCGAATGCTCCATACATGCTGAATGTGGATTGTGATCACTACATAAACAACAGCAAGGCACTTAGAGAAGCAATGTGCTTCATGATGGATCCTATTTGCGGAAAGAAAATCTGCTATGTCCAATTCCCCCAAAGATTCGACGGTATTGATCGGCACGATCGATATTCGAATCGCAATGTTGTCTTCTTTGATATCAATATGAAAGGGTTAGATGGGATCCAAGGGCCAATTTATGTCGGAACTGGTTGTGTCTTCCGGAGGCAGGCACTCTATGGATATGATGCTCCTGTTAAGAAGAAAGCTCCGCAAAGGACTTGTAATTGTTGGCCGAAATGGTGTTGTTTGTGTTGTGGATCGAGAAAGAAGAATAATAAGAAGGGGAAAACTATGGACAAAAAGAAGTCCAAGAACAAGGACGGTTCAAAGCAGATACATGCTTTAGAAAATATTGAAGAAGGAATTGAAGGAATTGACAACGAAAAGTCGTCTCTAATGCCTCAAATTAAGTTCGAAAAGAAATTTGGACAGTCAGCCGTATTCATAGCTTCAACGCTGAAGGAAAACGGCGGAGTACCTGAAGGTGTAACTTCTGCATCACTCTTGAAGGAAGCGATTCATGTCATTAGCTGTGGATATGAAGACAAAACCGAATGGGGAAAAGAGGTTGGTTGGATATATGGCTCAGTCACGGAGGATATATTAACAGGCTTCAAGATGCACTGTCATGGTTGGCGATCTGTTTATTGCATACCCAAAAGAGCCGCATTTAAAGGGTCGGCTCCGATTAATCTTTCTGATCGGCTGCACCAAGTTCTTCGGTGGGCTCTCGGGTCGGTTGAGATTCTCTTGAGCAGGCATTGTCCGATATGGTATGGATATGGGTGCGGCCTGAAATGGCTTGAGCGTTTCTCCTACATAAACTCAGTTGTTTATCCTTTGACATCCATTCCCTTGATTGCTTATTGTACTTTGCCTGCTGTCTGTCTTCTCACGGGAAAATTTATCGTCCCAGAGCTTAGCGACTATGCCAGTATCATTTTCATGGCTCTTTTCATATCGATAGCAGCTACTGGTATCCTAGAAATGCAGTGGGGAGGAGTTGGAATCCATGATTGGTGGAGAAATGAACAATTCTGGGTGATCGGAGGTGTTTCCGCCCACCTTTTCGCTCTATTACAAGGTCTTCTCAAGGTTTTGGCCGGAATTAACACAAACTTCACTGTCACATCAAAAGCTGCCGACGACGGAGAGTTCTCGGAGCTCTACCTCTTCAAATGGACGTCCTTATTGGTCGCACCCATGACTCTACTCATTATAAACATCATCGGCGTAATCGTCGGAATTTCAGATGCCATCAATAACGGCTATGATTCATGGGGTCCGCTCATTGGTAAGCTATTCTTTGCCTTCTGGGTCATCGTCCATCTTTACCCCTTCCTGAAAGGTAAAAAAATGTCTCACAGAAAGTTTGAGCACCCCAGACATGGTTCACTTGGATTTCTCCCGAGGAAGAGGGCTGCACGTCACAGAGGAAAAGTGAAGGCATTCCCCAAGGATGATCCAACTAAGCCTTGTAAGCTTACTGCATTTTTGGGCTACAAAGCTGGAATGACTCATATTGTCAGGGAGGTTGAAAAACCTGGATCAAAGCTTCACAAGAAGGAAACATGTGAGGCAGTGACAATCATTGAGACTCCACCAATGGTCATTGTTGGAGTTGTTGGTTATGTGAAGACACCACGGGGTCTCCGTTCATTGAACACTGTGTGGGCCCAGCATCTTAGTGAGGAACTGAAAAGGAGGTTTTATAAGAATTGGTGCAAGTCCAAAAAGAAGGCTTTTACAAAGTACTCAAAACAGTTTGAAACAGATGAAGGGAAGAAAAGTGTTCAAGCACAGCTTGAAAAGATGAAGAAATATGCAACTGTGATAAGAGTTTTGGCCCATACTCAGATACGGAAAATGAAAGGTTTAAAGCAAAAGAAAGCACACCTGATGGAAATTCAAGTTAATGGTGGGACTATTGCGCAGAAGGTTGACTTTGCTTATGGATTCTTTGAGAAACAAGTTCCTATTGATGCCGTTTTCCAAAAGGATGAGATGATTGACATCATTGGTGTGACTAAAGGTAAAGGTTATGAAGGTGTTGTCACTCGATGGGGTGTTACCCGCCTACCTCGTAAGACTCACAGGGGTCTCAGGAAGGTTGCTTGTATTGGTGCTTGGCATCCTGCTAGAGTATCATTTACAGTTGCAAGGGCTGGTCAAAATGGATACCACCACCGTACTGAAATGAACAAGAAAGTTTATAAGGTTGGCAAGGCCGGGCAGGAATCACACACAGCTATTACTGAATTTGACAGGACCGAAAAAGACATCACTCCCATGGGCGGCTTCCCTCACTATGGTGTCGTGAAAGATGACTATCTATTGATAAAGGGGTGCTGTGTTGGACCTAAGAAAAGGGTTGTGACCCTTCGGCAGTCACTCCTCAAGCAGACATCTCGAGTGGCGCTTGAGGAGATCAAACTCAAGTTCATCGACACCTCCTCCAAATTTGGGCACGGTCGCTTCCAGACTACCCAGGAGAAGCAGAAATTCTTCGGCCGTCTCAAGGCATAA 4716 45.17 MEYRIRSGTTGTGSTRYRSSSTAMAVRLMRAVQYEGYGGRAAGLKNQTGTGLLLDRYRSSKKKNRYRRSSAGPLYNRTGPFWFWFRFIILETENRMIGSKRSGTETENRFKSWFGTETKLEPRFGSDSGSGSDSLLLELITEWLVPRGRLIAGSHNRNEFVLINADEVARVTSVKELSGQICQICGDEIEFTVDGEPFVACNECAFPVCRPCYEYERREGNQACPQCKTRYKRIKGSPRVEGDEEEDGVDDLENEFDISSDPHYIAEQMLSSHLNVGRGSQINGNHMSSELDASSPPMNIPLLTYDQEDAGISSDKHALIIPPFMSRGKRVHPMPYADNSVTVQPRPMDPKKDLAVYGYGTVAWKERMEEWKRKQNEKLQVVKHEGDGGNEFDDPDLPMMDEGRQPLSRKLPISSSKINPYRMIILLRIVILGLFFHYRILHPVNDAYGLWLTSVICEIWFAASWILDQFPKWCPIVRETYLDRLSLRYEKEGKPSELGSVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFTIEPRAPEWYFAQKVDYLKDKVDPAFIRERRAIKRDYEEFKVRINSLVAMAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGQNGVCDVEGNELPRLVYVSREKRPGFDHHKKAGAMNALVRVSAIISNAPYMLNVDCDHYINNSKALREAMCFMMDPICGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPVKKKAPQRTCNCWPKWCCLCCGSRKKNNKKGKTMDKKKSKNKDGSKQIHALENIEEGIEGIDNEKSSLMPQIKFEKKFGQSAVFIASTLKENGGVPEGVTSASLLKEAIHVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRAAFKGSAPINLSDRLHQVLRWALGSVEILLSRHCPIWYGYGCGLKWLERFSYINSVVYPLTSIPLIAYCTLPAVCLLTGKFIVPELSDYASIIFMALFISIAATGILEMQWGGVGIHDWWRNEQFWVIGGVSAHLFALLQGLLKVLAGINTNFTVTSKAADDGEFSELYLFKWTSLLVAPMTLLIINIIGVIVGISDAINNGYDSWGPLIGKLFFAFWVIVHLYPFLKGKKMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPTKPCKLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEAVTIIETPPMVIVGVVGYVKTPRGLRSLNTVWAQHLSEELKRRFYKNWCKSKKKAFTKYSKQFETDEGKKSVQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQKVDFAYGFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKVYKVGKAGQESHTAITEFDRTEKDITPMGGFPHYGVVKDDYLLIKGCCVGPKKRVVTLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKFFGRLKA 1571
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 57039789 57060880 + BLOR01734 Blo01g01734 56174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01734 1571 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 165 255 IPR013083 -
Blo01g01734 1571 Gene3D - 1265 1389 - -
Blo01g01734 1571 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 147 1181 - -
Blo01g01734 1571 Pfam Ribosomal protein L3 1183 1552 IPR000597 GO:0003735|GO:0005840|GO:0006412
Blo01g01734 1571 ProSiteProfiles Zinc finger RING-type profile. 182 228 IPR001841 -
Blo01g01734 1571 SUPERFAMILY Nucleotide-diphospho-sugar transferases 514 1043 IPR029044 -
Blo01g01734 1571 CDD mRING-HC-C4C4_CesA_plant 180 230 - -
Blo01g01734 1571 Pfam Cellulose synthase 501 1181 IPR005150 GO:0016020|GO:0016760|GO:0030244
Blo01g01734 1571 SUPERFAMILY RING/U-box 171 250 - -
Blo01g01734 1571 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 654 795 IPR029044 -
Blo01g01734 1571 SUPERFAMILY Translation proteins 1186 1552 IPR009000 -
Blo01g01734 1571 Gene3D Ribosomal protein L3, domain 3 1183 1456 IPR044892 -
Blo01g01734 1571 MobiDBLite consensus disorder prediction 820 840 - -
Blo01g01734 1571 ProSitePatterns Ribosomal protein L3 signature. 1394 1417 IPR019926 -
Blo01g01734 1571 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 9 [UDP-FORMING]-RELATED 147 1181 - -
Blo01g01734 1571 Pfam Zinc-binding RING-finger 173 248 IPR027934 -
Blo01g01734 1571 Gene3D Translation factors 1226 1567 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g01734 Blo12g00780 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01734 Blo-Chr1:57039789 Blo06g00601 Blo-Chr6:28735117 0 dispersed
Blo06g00793 Blo-Chr6:31214036 Blo01g01734 Blo-Chr1:57039789 0 dispersed
Blo01g01663 Blo-Chr1:56383506 Blo01g01734 Blo-Chr1:57039789 0 transposed
Blo12g00781 Blo-Chr12:26213649 Blo01g01734 Blo-Chr1:57039789 0 transposed
Blo16g00514 Blo-Chr16:20825520 Blo01g01734 Blo-Chr1:57039789 0 transposed
Blo01g01734 Blo-Chr1:57039789 Blo12g00780 Blo-Chr12:26196583 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01734 K10999 - gmx:100806786 2543.84