Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01741 ATGGCTTCGGGAGTAAATAATGCGTTTGGTTTTGAAATATCGAATCGAATTGGTTCAGTGTCTTGGAGGAGTCGTAGCAAGATTGGGGAAGAACAAAAGGGAGAGAGAGGGTCAGTCGTGAGGAGGCGATGTTTGTATGAAATTCCAGGCCCAGCCGGCAAGGCAATAGATGTTGTTTCGGAGAAGAAAGGAGATGAGAATTATCAGGTGGACCGCGTTGGCACGATAGTTACCATGCGTACCATTGCCTTCTCCCTTCCTAACGAGCACCGTCACGTAGAAAAGCTGTTTCGCGTCCAAAAATCATTCTTTTCCGATCTTCTTCAATTCTTCGGATTTCGGGCTCAACTAGACGGAAGCGATAAAAGCTCGCCGGAGATGGGTAAGAAGCGTAAGTCCATCGCCTCTAGTCTCGACGAGGTCGATCGAACCATGTACGCCTCTTTTTGCAGTGCGGCTAACTCCCTCTCCCAGCTCTATACCCAGGCCATGAACCATCAGAAGTTATCCTTTCAAGCTGGGGAACGTCACGCTATGGAGAAACTTTATCAGTGGATCTGGAGACAACAAGAAGGAGGACCGAGAGTTACGACAAGTGACATACTTAGTTACTTACAGAACGAGCTGGACTACAATGGGGAGGAACCATCAATGTCTCCAAGGGCGCCCATTCATCATCAGCAGTCTCAACCTTTCATGAACTCAGGTTTTCCTGTGTCTTCAGGATCTTCAGGTCCAACTACTACTGGGCAAGGAGTTCGATCTGAACACTCCGATAATCAAACAAAAAATTCAGTATTCTCAAACGCATTGTCGAGCCCTGTTCGTCGTAGTCTCCAGGACTATCACCTAGCTCAGGGAGTTTACAACCCAAACAGTGGTGGTCCTCACTCGGGAAACAGTGTCCGGAACAGCGAACCGAGTTTTCTTCAGCACCAGACTGGGAATACAAATCCTGTTACTTCAAATGATTCTTCTATGGAAGATAGTCCTAATGAATCGACTTATTAA 1011 46.98 MASGVNNAFGFEISNRIGSVSWRSRSKIGEEQKGERGSVVRRRCLYEIPGPAGKAIDVVSEKKGDENYQVDRVGTIVTMRTIAFSLPNEHRHVEKLFRVQKSFFSDLLQFFGFRAQLDGSDKSSPEMGKKRKSIASSLDEVDRTMYASFCSAANSLSQLYTQAMNHQKLSFQAGERHAMEKLYQWIWRQQEGGPRVTTSDILSYLQNELDYNGEEPSMSPRAPIHHQQSQPFMNSGFPVSSGSSGPTTTGQGVRSEHSDNQTKNSVFSNALSSPVRRSLQDYHLAQGVYNPNSGGPHSGNSVRNSEPSFLQHQTGNTNPVTSNDSSMEDSPNESTY 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 57104505 57109226 - BLOR01741 Blo01g01741 56181

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01741 336 PANTHER HOLOCARBOXYLASE SYNTHETASE 127 329 - -
Blo01g01741 336 MobiDBLite consensus disorder prediction 212 274 - -
Blo01g01741 336 MobiDBLite consensus disorder prediction 286 336 - -
Blo01g01741 336 PANTHER NUCLEAR RECEPTOR FAMILY 2 GROUP C PROTEIN 127 329 - -
Blo01g01741 336 MobiDBLite consensus disorder prediction 222 274 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01741 - - - hbr:110652960 301.982
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo01g01741 Blo12g00775 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01741 Blo-Chr1:57104505 Blo12g00775 Blo-Chr12:26164914 3.16E-116 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1340 Blo01g01741 Blo12g00775 . Bda03g00403 Bpe02g00202 Bpe04g00367 . Bma01g02519 . . . . Car01g00860 . . Cpe06g00910 . . . . . . . . . . . . . . . . . . . . . . . . . Bda11g00863 . . . . . Sed07g2827 . . . . . . . . Bhi09g01539 Tan01g3074 Cmetu01g0774 . . Mch11g1488 . Cla09g00950 Cam09g1001 Cec09g1004 Cco09g1014 . . Cre09g0965 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003826 3 1 2 2 2 1 3 1 2 1 1 1 2 0 1 3 1 3 2 1 1 1 1 1 2 1 1 1 1 2 45
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo01g01741 Blo_Chr01 FPKM 12.849909 11.538097 20.349047 22.275326 8.981673 10.20715 10.913048 16.474072 17.324625 19.277584