Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01759 ATGAATCATAAAGAGAGCCTATCTGGTGTTGACACATGGAAAAATACTCCATTTTCAGTAAATCCATCATCAGATGAGATTCCCCCGGATCATCCGTCTTTTTCCAATATCAGCTCGCTAAATCAGCAGAAATGGGAAGATGCCAATATTTTCGATTATGATGTTGGCATGGAGTCGCAGTTCGAAGAATTCAATCAAGCTTCAGAATCTCAATCTTCACTCTCCTGCAAATCGAACGATCAAGCGAAAATCTTGGAGAAAGTGAACGATCAAATGATGGAATTGGAGACACTCGAATCGTATAAAACACAAGATTGGGATCCAAGAGCAATGCTGAATAATCTCTCTTTCTTAGAACAGAAAATTCATCACCTCCAACATTTAGTGCATGTAATTGTTGATCAGAGGAGCCAGGTTATAGGACAGTCGAACGAGCTTATGTTTCAACAGCAGCAGCTCATAACGGCTGATCTTACTTCAATTATAGTTCAGCTCGTCTCTACAGCAGGCAACCTTCTCCCGTCTGCTAGGAACCTTTCCTCTGTTAATCCGTCAATTGAGCAGCTTGGTTCGCTCGAGGATGTTTTTATCCCGGCTGACGGGTGTAAATTTCCCGAGCTGAGCCACCAGATCGACCCAATGGGTAATGACGTCAATGAGACGAAATTCAGTATCGAAGATCACGATTTGAAAGAGGAGGAAGATGCCGACGAAGGGGAGAATCTCCCTCCCGGTTCGTACGAAATTTTGCAACTCGAGAAAGAGGAAATCCTCGCACCTCACACTCATTTTTGCACTATATGTGGGAAGGGATTCAAAAGGGACGCAAATTTGCGCATGCACATGAGGGGCCATGGAGACGAGTATAAAACTCCGGCTGCTCTGGCGAAACCCGTCAAAGAGCCGAGCTCTGAATCTGTGCTGATCAAGAGGTATTCTTGCCCATATAATGGGTGTAAGAGAAATAGAGATCATAAAAAGTTCCAGCCTTTGAAGACTATTTTATGTGTCAAAAACCACTACAAGAGAACTCACTGTGACAAGAGCTACACCTGCAGCAAATGCAACACCAAGAAATTTTCAGTCATTGCCGATCTCAAAACGCACGAGAAGCATTGCGGGAAGGACAAGTGGTTGTGTTCTTGCGGGACGACTTTCTCCAGGAAAGACAAGCTTTTTGGGCACATCGCCCTCTTCCAAGGCCATACTCCTGCTATCATGATTGACGAGTCGAAAGGAACGGTGGGAACCGCTGATCGAGTCGATAATATTGCATCGACAAACAAAGTCGGGACTGCAAATTTCAATTTCGGGTCGATGCCGTCCGTGGGAAATGAAGTCGAAAACATTATTGATGTGAAAGGTGTTGATGATCTGACAAGCTATTACTCGCCTCTGAACTTCGATCCGTGTAGTATTGCCGGGTTTCATGAGTTCCCTCGACCCCCGTTTAATGACTCGGAGAGTTCGTTTTCTTATCTCCTCCAAGGGTCTAAAGTGAAGCACTAG 1509 44.73 MNHKESLSGVDTWKNTPFSVNPSSDEIPPDHPSFSNISSLNQQKWEDANIFDYDVGMESQFEEFNQASESQSSLSCKSNDQAKILEKVNDQMMELETLESYKTQDWDPRAMLNNLSFLEQKIHHLQHLVHVIVDQRSQVIGQSNELMFQQQQLITADLTSIIVQLVSTAGNLLPSARNLSSVNPSIEQLGSLEDVFIPADGCKFPELSHQIDPMGNDVNETKFSIEDHDLKEEEDADEGENLPPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTPAALAKPVKEPSSESVLIKRYSCPYNGCKRNRDHKKFQPLKTILCVKNHYKRTHCDKSYTCSKCNTKKFSVIADLKTHEKHCGKDKWLCSCGTTFSRKDKLFGHIALFQGHTPAIMIDESKGTVGTADRVDNIASTNKVGTANFNFGSMPSVGNEVENIIDVKGVDDLTSYYSPLNFDPCSIAGFHEFPRPPFNDSESSFSYLLQGSKVKH 502
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 57342509 57344017 - BLOR01759 Blo01g01759 56199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01759 502 PANTHER PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1 44 496 - -
Blo01g01759 502 SUPERFAMILY beta-beta-alpha zinc fingers 261 288 IPR036236 -
Blo01g01759 502 SMART c2h2final6 312 345 IPR013087 -
Blo01g01759 502 SMART c2h2final6 263 285 IPR013087 -
Blo01g01759 502 SMART c2h2final6 350 372 IPR013087 -
Blo01g01759 502 Gene3D Classic Zinc Finger 337 406 - -
Blo01g01759 502 MobiDBLite consensus disorder prediction 1 31 - -
Blo01g01759 502 ProSitePatterns Zinc finger C2H2 type domain signature. 265 285 IPR013087 -
Blo01g01759 502 ProSiteProfiles Zinc finger C2H2 type domain profile. 263 290 IPR013087 -
Blo01g01759 502 Gene3D Classic Zinc Finger 247 315 - -
Blo01g01759 502 PANTHER PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1 44 496 IPR044300 GO:0010044|GO:0010447
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01759 Blo-Chr1:57342509 Blo05g00762 Blo-Chr5:27494915 9.09E-75 dispersed
Blo01g01759 Blo-Chr1:57342509 Blo10g00983 Blo-Chr10:29046214 1.91E-27 transposed
Blo01g01759 Blo-Chr1:57342509 Blo05g00203 Blo-Chr5:2073554 1.81E-28 transposed
Blo01g01759 Blo-Chr1:57342509 Blo07g01404 Blo-Chr7:34080193 5.36E-27 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11957 None None None None Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01759 - - vvi:100248677 671.774