Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01786 ATGGCGAATCCTCAGGCACCGGGGCATCGGAGAGGCAGGTCAGCTCAGGCGCATCTCCCTGTGGTCCGCGGGAGGGTTCCGTTGAGAAAGTTACTCCGTGTGGCATCGGTGGCTTGTGGAATTCAATTCGGATGGGCTCTCCAGCTCTCTCTTTTGACCCCCTACGTGCAGCAGCTTGGAATTCCTCACGCATGGGCTAGCGTCATATGGCTTTGCGGACCTCTCTCGGGACTTTTTGTTCAGCCGCTGGTCGGCCACTTGAGCGACCGATGCACAAGTCGGTTTGGCAGGCGGAGGCCATTCATTGTCGCCGGAGCGTTGGCAATTATTATCTCTGTTTTGATAATCGGACATTCGGCGGACATCGGATGGTTGATCGGCGATAGAGGTAAGGTTAAGCCAGCTGCGGTGGCGACCTTTGTCCTCGGGTTTTGGATCCTTGATGTTGCCAATAACATGACGCAAGGACCTTGCAGGGCTCTGCTTGCCGATCTTACCGGAAATGATCATCGGAGGACGCGGGTGGCTAATGCTTATTTTTCTCTTTTTATGGCTGTTGGCAATATTCTTGGTTTTGCTACTGGATCCTACAGTAAATGGTTCAAGATATTCCCCTTTACTCTTACATCTGCGTGCAATGCAAGTTGTGCAAATCTCAAGGCAGCTTTTTATCTTGATGTTGTGTTTGTGGCAGTCACGACATTTCTTAGCATATCTGCAGCTCAAGAATCAACTTTCACTCCGAGTGAGGGAGCTGCTCTAGTTGCTGGAGAAAGGTCGGAACAGACGAGCAATTCTCAAGAAGCTTTCATGTGGGAGCTTTTTGGCACATTTAGATACTTCTCAGGGTCCATATGGATCATTTTGTTGGTCACTGCACTGACCTGGATTGGTTGGTTTCCTTTTCTTCTCTTTGATACTGATTGGATGGGTAGAGAGATTTTTGGAGGTGAGCCAAATGAAGGGCAGAGTTATGATAATGGCGTTAGAGTTGGCGCACTTGGCCTCATGTTAAACTCAGTTGTTCTCGGAGTAACTTCATTGCTCATGGAGAAGCTCTGCAGAAAGTGGGGGGCGGGGATTGTGTGGGGGGCATCAAACATCATGATGGCTCTTTGCTTTCTTGCAATGCTTGTTGTTACATTTTTGTCAAAGAGGATCAAGAATGTTGCTGATGACCCACCTCCAGATGGTATCGTGGTAGCTGCATTGATAATTTTTTCTATTCTGGGTGTTCCATTGGCGATCACTTACAGTGTTCCTTATGCTTTGATTTCAACACACATTGGTTCCCTGGGACTTGGACAAGGATTATGCATGGGGGTCCTGAATCTAGCTATAGTAATTCCACAGGTTATAGTGTCGGTGGGAAGTGGACCATGGGATCAGCTGTTTGGTGGTGGAAACTCTCCAGCCTTTGCTGTGGCAGCCGTTGCAGCATTTGCTAGTGGCCTTGTCGCCATATTGGTTATCCCTAAATCCGGTACTCGGAAAGTTAGAGCAAACGCTTGA 1512 48.61 MANPQAPGHRRGRSAQAHLPVVRGRVPLRKLLRVASVACGIQFGWALQLSLLTPYVQQLGIPHAWASVIWLCGPLSGLFVQPLVGHLSDRCTSRFGRRRPFIVAGALAIIISVLIIGHSADIGWLIGDRGKVKPAAVATFVLGFWILDVANNMTQGPCRALLADLTGNDHRRTRVANAYFSLFMAVGNILGFATGSYSKWFKIFPFTLTSACNASCANLKAAFYLDVVFVAVTTFLSISAAQESTFTPSEGAALVAGERSEQTSNSQEAFMWELFGTFRYFSGSIWIILLVTALTWIGWFPFLLFDTDWMGREIFGGEPNEGQSYDNGVRVGALGLMLNSVVLGVTSLLMEKLCRKWGAGIVWGASNIMMALCFLAMLVVTFLSKRIKNVADDPPPDGIVVAALIIFSILGVPLAITYSVPYALISTHIGSLGLGQGLCMGVLNLAIVIPQVIVSVGSGPWDQLFGGGNSPAFAVAAVAAFASGLVAILVIPKSGTRKVRANA 503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 57590023 57592726 + BLOR01786 Blo01g01786 56226

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01786 503 PANTHER SUCROSE/H+ SYMPORTER, PLANT, MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED 10 501 - -
Blo01g01786 503 Gene3D MFS general substrate transporter like domains 28 491 IPR036259 -
Blo01g01786 503 CDD MFS_SLC45_SUC 31 470 - -
Blo01g01786 503 Pfam MFS/sugar transport protein 44 193 - -
Blo01g01786 503 PANTHER SUGAR TRANSPORTER 10 501 - -
Blo01g01786 503 TIGRFAM GPH_sucrose: sucrose/H+ symporter 26 494 IPR005989 GO:0005887|GO:0008515|GO:0015770
Blo01g01786 503 SUPERFAMILY MFS general substrate transporter 31 495 IPR036259 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01786 K15378 SLC45A1_2_4; solute carrier family 45, member 1/2/4 - zju:107421393 788.489
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00422 Blo-Chr1:4767036 Blo01g01786 Blo-Chr1:57590023 2.00E-146 transposed
Blo17g00150 Blo-Chr17:1408746 Blo01g01786 Blo-Chr1:57590023 5.20E-165 transposed
Blo01g01786 Blo-Chr1:57590023 Blo12g00742 Blo-Chr12:25777589 3.24E-08 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g575 Blo01g01786 . . . Bpe02g00155 . . Bma01g02572 . Cmo12g00183 . . . Car12g00209 Sed08g1987 . Cpe07g00193 Bhi04g00897 Tan02g2516 Cmetu03g0103 . Hepe10g0399 . Lcy13g1450 Cla08g01190 Cam08g1654 Cec08g1231 Cco08g1350 Clacu08g1351 . Cre08g1137 . . . . . . . Cme03g01774 . . Bda11g00815 . . . . Bma02g00169 . . . Cma12g00228 . Car05g00514 . . . . . . . . . . . . . . . . . Lsi08g01052 Csa02g02236 Chy03g01280 .
Vvi18g1266 Blo01g01786 . . . Bpe02g00155 . . Bma01g02572 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bda11g00815 Bda13g01439 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Blo17g00150 . 15 489 Sucrose Transporter Gene Family AT1G22710 65.1 6.6e-177 617.5
Blo01g01786 . 28 492 Sucrose Transporter Gene Family AT1G22710 53.2 4.6e-146 515.0
Blo17g00150 . 7 475 Sucrose Transporter Gene Family AT2G14670 62.8 2.2e-169 592.4
Blo01g01786 . 13 492 Sucrose Transporter Gene Family AT2G14670 53.0 1.5e-146 516.5
Blo17g00150 . 7 398 Sucrose Transporter Gene Family AT1G66570 62.2 5.8e-140 494.6
Blo01g01786 . 24 420 Sucrose Transporter Gene Family AT1G66570 53.2 5.4e-122 434.9
Blo01g00422 . 155 611 Sucrose Transporter Gene Family AT2G02860 70.6 1.0e-184 643.3
Blo17g00150 . 5 475 Sucrose Transporter Gene Family AT5G06170 61.3 9.2e-160 560.5
Blo01g01786 . 27 492 Sucrose Transporter Gene Family AT5G06170 51.3 1.0e-134 477.2
Blo17g00150 . 13 475 Sucrose Transporter Gene Family AT5G43610 62.4 6.6e-166 580.9
Blo01g01786 . 22 492 Sucrose Transporter Gene Family AT5G43610 52.7 1.7e-142 503.1
Blo01g01786 . 14 498 Sucrose Transporter Gene Family AT1G09960 72.8 8.0e-207 716.8
Blo17g00150 . 6 480 Sucrose Transporter Gene Family AT1G09960 52.8 2.5e-136 482.6
Blo17g00150 . 13 489 Sucrose Transporter Gene Family AT1G71880 61.6 1.1e-168 590.1
Blo01g01786 . 27 492 Sucrose Transporter Gene Family AT1G71880 53.1 8.5e-140 494.2
Blo17g00150 . 13 478 Sucrose Transporter Gene Family AT1G71890 60.7 2.4e-163 572.4
Blo01g01786 . 27 492 Sucrose Transporter Gene Family AT1G71890 50.3 6.3e-135 478.0
Blo17g00150 . 13 489 Sucrose Transporter Gene Family AT1G71880 61.6 1.1e-168 590.1
Blo01g01786 . 27 492 Sucrose Transporter Gene Family AT1G71880 53.1 8.5e-140 494.2
Blo17g00150 . 15 489 Sucrose Transporter Gene Family AT1G22710 65.1 6.6e-177 617.5
Blo01g01786 . 28 492 Sucrose Transporter Gene Family AT1G22710 53.2 4.6e-146 515.0
Blo01g00422 . 155 611 Sucrose Transporter Gene Family AT2G02860 70.6 1.0e-184 643.3
Blo01g01786 . 14 498 Sucrose Transporter Gene Family AT1G09960 72.8 8.0e-207 716.8
Blo17g00150 . 6 480 Sucrose Transporter Gene Family AT1G09960 52.8 2.5e-136 482.6
Blo17g00150 . 13 478 Sucrose Transporter Gene Family AT1G71890 60.7 2.4e-163 572.4
Blo01g01786 . 27 492 Sucrose Transporter Gene Family AT1G71890 50.3 6.3e-135 478.0
Blo17g00150 . 13 475 Sucrose Transporter Gene Family AT5G43610 62.4 6.6e-166 580.9
Blo01g01786 . 22 492 Sucrose Transporter Gene Family AT5G43610 52.7 1.7e-142 503.1
Blo17g00150 . 7 398 Sucrose Transporter Gene Family AT1G66570 62.2 5.8e-140 494.6
Blo01g01786 . 24 420 Sucrose Transporter Gene Family AT1G66570 53.2 5.4e-122 434.9
Blo17g00150 . 7 475 Sucrose Transporter Gene Family AT2G14670 62.8 2.2e-169 592.4
Blo01g01786 . 13 492 Sucrose Transporter Gene Family AT2G14670 53.0 1.5e-146 516.5
Blo17g00150 . 5 475 Sucrose Transporter Gene Family AT5G06170 61.3 9.2e-160 560.5
Blo01g01786 . 27 492 Sucrose Transporter Gene Family AT5G06170 51.3 1.0e-134 477.2
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010988 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 30
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo01g01786 Blo_Chr01 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0