Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo01g01786 ATGGCGAATCCTCAGGCACCGGGGCATCGGAGAGGCAGGTCAGCTCAGGCGCATCTCCCTGTGGTCCGCGGGAGGGTTCCGTTGAGAAAGTTACTCCGTGTGGCATCGGTGGCTTGTGGAATTCAATTCGGATGGGCTCTCCAGCTCTCTCTTTTGACCCCCTACGTGCAGCAGCTTGGAATTCCTCACGCATGGGCTAGCGTCATATGGCTTTGCGGACCTCTCTCGGGACTTTTTGTTCAGCCGCTGGTCGGCCACTTGAGCGACCGATGCACAAGTCGGTTTGGCAGGCGGAGGCCATTCATTGTCGCCGGAGCGTTGGCAATTATTATCTCTGTTTTGATAATCGGACATTCGGCGGACATCGGATGGTTGATCGGCGATAGAGGTAAGGTTAAGCCAGCTGCGGTGGCGACCTTTGTCCTCGGGTTTTGGATCCTTGATGTTGCCAATAACATGACGCAAGGACCTTGCAGGGCTCTGCTTGCCGATCTTACCGGAAATGATCATCGGAGGACGCGGGTGGCTAATGCTTATTTTTCTCTTTTTATGGCTGTTGGCAATATTCTTGGTTTTGCTACTGGATCCTACAGTAAATGGTTCAAGATATTCCCCTTTACTCTTACATCTGCGTGCAATGCAAGTTGTGCAAATCTCAAGGCAGCTTTTTATCTTGATGTTGTGTTTGTGGCAGTCACGACATTTCTTAGCATATCTGCAGCTCAAGAATCAACTTTCACTCCGAGTGAGGGAGCTGCTCTAGTTGCTGGAGAAAGGTCGGAACAGACGAGCAATTCTCAAGAAGCTTTCATGTGGGAGCTTTTTGGCACATTTAGATACTTCTCAGGGTCCATATGGATCATTTTGTTGGTCACTGCACTGACCTGGATTGGTTGGTTTCCTTTTCTTCTCTTTGATACTGATTGGATGGGTAGAGAGATTTTTGGAGGTGAGCCAAATGAAGGGCAGAGTTATGATAATGGCGTTAGAGTTGGCGCACTTGGCCTCATGTTAAACTCAGTTGTTCTCGGAGTAACTTCATTGCTCATGGAGAAGCTCTGCAGAAAGTGGGGGGCGGGGATTGTGTGGGGGGCATCAAACATCATGATGGCTCTTTGCTTTCTTGCAATGCTTGTTGTTACATTTTTGTCAAAGAGGATCAAGAATGTTGCTGATGACCCACCTCCAGATGGTATCGTGGTAGCTGCATTGATAATTTTTTCTATTCTGGGTGTTCCATTGGCGATCACTTACAGTGTTCCTTATGCTTTGATTTCAACACACATTGGTTCCCTGGGACTTGGACAAGGATTATGCATGGGGGTCCTGAATCTAGCTATAGTAATTCCACAGGTTATAGTGTCGGTGGGAAGTGGACCATGGGATCAGCTGTTTGGTGGTGGAAACTCTCCAGCCTTTGCTGTGGCAGCCGTTGCAGCATTTGCTAGTGGCCTTGTCGCCATATTGGTTATCCCTAAATCCGGTACTCGGAAAGTTAGAGCAAACGCTTGA 1512 48.61 MANPQAPGHRRGRSAQAHLPVVRGRVPLRKLLRVASVACGIQFGWALQLSLLTPYVQQLGIPHAWASVIWLCGPLSGLFVQPLVGHLSDRCTSRFGRRRPFIVAGALAIIISVLIIGHSADIGWLIGDRGKVKPAAVATFVLGFWILDVANNMTQGPCRALLADLTGNDHRRTRVANAYFSLFMAVGNILGFATGSYSKWFKIFPFTLTSACNASCANLKAAFYLDVVFVAVTTFLSISAAQESTFTPSEGAALVAGERSEQTSNSQEAFMWELFGTFRYFSGSIWIILLVTALTWIGWFPFLLFDTDWMGREIFGGEPNEGQSYDNGVRVGALGLMLNSVVLGVTSLLMEKLCRKWGAGIVWGASNIMMALCFLAMLVVTFLSKRIKNVADDPPPDGIVVAALIIFSILGVPLAITYSVPYALISTHIGSLGLGQGLCMGVLNLAIVIPQVIVSVGSGPWDQLFGGGNSPAFAVAAVAAFASGLVAILVIPKSGTRKVRANA 503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 57590023 57592726 + BLOR01786 Blo01g01786 56226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo01g01786 503 PANTHER SUCROSE/H+ SYMPORTER, PLANT, MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED 10 501 - -
Blo01g01786 503 Gene3D MFS general substrate transporter like domains 28 491 IPR036259 -
Blo01g01786 503 CDD MFS_SLC45_SUC 31 470 - -
Blo01g01786 503 Pfam MFS/sugar transport protein 44 193 - -
Blo01g01786 503 PANTHER SUGAR TRANSPORTER 10 501 - -
Blo01g01786 503 TIGRFAM GPH_sucrose: sucrose/H+ symporter 26 494 IPR005989 GO:0005887|GO:0008515|GO:0015770
Blo01g01786 503 SUPERFAMILY MFS general substrate transporter 31 495 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00422 Blo-Chr1:4767036 Blo01g01786 Blo-Chr1:57590023 2.00E-146 transposed
Blo17g00150 Blo-Chr17:1408746 Blo01g01786 Blo-Chr1:57590023 5.20E-165 transposed
Blo01g01786 Blo-Chr1:57590023 Blo12g00742 Blo-Chr12:25777589 3.24E-08 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo01g01786 K15378 - zju:107421393 788.489