Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00060 ATGAAACTTGACGAGAAGATCCACCTGCGGGAGACGATGTGCAGGATCATTGAAGTCGATGAGGTCGATCGCAACCGCCGTCTCACTTCGGTCGTTTTGACGGCCTCCGAGGACTGCGACAGGGACGCGGAGGACTTCTTCATCCCTCCTCTTAATTTCTCTCTCGTCGATAATGCCATTTTCCGCTCCGGTTTTCCCGACTCGGCCAACTTCTCCTTCCTTCAAACCCTAGGCCTCCGCTCCATTATATGCTTGTGTCCTGAACCATATCCAGACGCTAATGATGAGTTTCTGAAGGCAAATGGGATCAGATTGTTTCAATTTGGGATTGAAAGTTACAAGTGGACTGGATTTTGGTATACTTTTCCTGGGTTGTATGAAGAATTTGGAGATGAACATCAAGCAAATAGGCCATCAAAATCAATGCTCCTTGACTGGGGATACTCCTTTAAGTGGAGACCCCATAATTTATATGTCAATATGATGAGAAGATATCACATATCTGCATTGTTCTTGGTGCTGCTCATTTTACTTCCTCATACTCTACTCTCTCTGATTTCTTTTAGTAATGACTTTTTGCATATTGTCTATGCAGACGTGAGAAATCACCCTATTCTGATCCATTGTAAGCGCGGGAAGCATCGAACCGGTTGTCTGGTGGGATGCTTGAGAAAATTGCAGAGATGGTGTCTTTCGTCTATTTTCGATGAGTATCAGCGTTTTGCTGCCGCCAAAGCCAGAGTTTCCGACCAGAGGTTCATGGAGTTGTTCGATGTTTCGAGCTTAAAGCATCTGCCAATGTCATTTTCATGCTCCAAGAGGTAG 825 45.09 MKLDEKIHLRETMCRIIEVDEVDRNRRLTSVVLTASEDCDRDAEDFFIPPLNFSLVDNAIFRSGFPDSANFSFLQTLGLRSIICLCPEPYPDANDEFLKANGIRLFQFGIESYKWTGFWYTFPGLYEEFGDEHQANRPSKSMLLDWGYSFKWRPHNLYVNMMRRYHISALFLVLLILLPHTLLSLISFSNDFLHIVYADVRNHPILIHCKRGKHRTGCLVGCLRKLQRWCLSSIFDEYQRFAAAKARVSDQRFMELFDVSSLKHLPMSFSCSKR 274
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 402999 404329 - BLOR09790 Blo02g00060 56290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00060 274 PRINTS Plant and fungal dual specificity phosphatase signature 47 64 IPR020428 GO:0016791
Blo02g00060 274 PRINTS Plant and fungal dual specificity phosphatase signature 103 117 IPR020428 GO:0016791
Blo02g00060 274 PRINTS Plant and fungal dual specificity phosphatase signature 84 97 IPR020428 GO:0016791
Blo02g00060 274 PANTHER - 31 273 - -
Blo02g00060 274 PANTHER TYROSINE-PROTEIN PHOSPHATASE 31 273 - -
Blo02g00060 274 Gene3D Protein tyrosine phosphatase superfamily 46 261 IPR029021 -
Blo02g00060 274 ProSiteProfiles Dual specificity protein phosphatase domain profile. 52 271 IPR020422 GO:0006470|GO:0008138
Blo02g00060 274 Pfam Tyrosine phosphatase family 198 264 IPR004861 -
Blo02g00060 274 Pfam Tyrosine phosphatase family 48 114 IPR004861 -
Blo02g00060 274 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 190 220 IPR000387 GO:0016311|GO:0016791
Blo02g00060 274 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 47 258 IPR029021 -
Blo02g00060 274 ProSitePatterns Tyrosine specific protein phosphatases active site. 207 217 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00060 Blo-Chr2:402999 Blo17g00522 Blo-Chr17:8376526 2.46E-50 dispersed
Blo13g00337 Blo-Chr13:19362324 Blo02g00060 Blo-Chr2:402999 2.06E-81 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00060 K18045 - thj:104801010 258.84