Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo02g00066 | ATGAGTAGTGTCTGCGACAACTTCCACCCGTTTCTTCATTCTAAGAAAACCCTTCTGGAAGGTATTGATATTCCTCCCAGGAAGCTTCTTAATCGCCATGAAGGTCGTGATTTCTTCTCTGATTCGCCGCCTTTCTCGTTCTCCGGCGATGCCCTCCTGCAGAAATTCTTGCCCTGTAACAACAATGGCGGAGGCGATGGAGACGACGACGGAGATGACGATGATCTGTACTCCTCTGACTACTTTCGTATGTATGAGTTTAAGGTCCGGCGGTGTCCTCGCAGCCGGAGCCATGACTGGACGGACTGCCCTTTCGCTCACCCGGGAGAAAAAGCTCGCCGGAGAGACCCTCGCCGTTTTCACTACTCCGGCTACGTCTGCCCAGAGTTTCGCCGCGGTGGGTGCAACCGCGGCGATAGCTGTGAGTTCGCTCACGGCGTTTTCGAGTGCTGGCTTCATCCGGCGAGGTACCGAACTGAAGCTTGTAAAGATGGGAAAAACTGTAAAAGAAAGGTCTGTTTCTTCGCCCACTCTCCCCGGCAGCTTCGGATTCTGCCGGTAAACTCGCCGGAATTTCAGACGAGCAAGAAGAAGCTCCCGATCTCGGTCTCTGGCCCGAATCACTGCTGCTTATTTTGTCATTGTGGTTTATCATCTTCCCCAACCTCTACTCTCCTAGACATGTCTCATCTCTCTCCGCCCCTTTCGCCTCCAGTATCGCCTGCCAAACATCAGTCGGTGAACTCTTTGACTCCGATTTCGAGAAACGGTGAGGCTAAGTTGACCGGAACTGCACTTCCAGAAATGATCAACTCTCTGGAAGCAATGAGCTTCAACGAAGCGAATAAAAGGTCTCCAGTTATACCACCATGGATAGATGTTTCCATCTTGAGTGAAGAAAACCAGCAGCAGTTTATTCTGTCGCCATCAACTCCTAATTCATCTAGGTCGGTGAGTTGTGTGAGAAGGAATTTAAGTGCTGAGAACAAGGTTAAGGTTGAAAATGGCGGATTGGTTTGCTCTGATCCAGATGTCGGGTGGGTCGATGAGCTATTGATGTAG | 1062 | 50.66 | MSSVCDNFHPFLHSKKTLLEGIDIPPRKLLNRHEGRDFFSDSPPFSFSGDALLQKFLPCNNNGGGDGDDDGDDDDLYSSDYFRMYEFKVRRCPRSRSHDWTDCPFAHPGEKARRRDPRRFHYSGYVCPEFRRGGCNRGDSCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHSPRQLRILPVNSPEFQTSKKKLPISVSGPNHCCLFCHCGLSSSPTSTLLDMSHLSPPLSPPVSPAKHQSVNSLTPISRNGEAKLTGTALPEMINSLEAMSFNEANKRSPVIPPWIDVSILSEENQQQFILSPSTPNSSRSVSCVRRNLSAENKVKVENGGLVCSDPDVGWVDELLM | 353 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 452529 | 453590 | - | BLOR09796 | Blo02g00066 | 56296 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo02g00066 | 353 | SMART | c3hfinal6 | 121 | 147 | IPR000571 | GO:0046872 | |
Blo02g00066 | 353 | SMART | c3hfinal6 | 156 | 179 | IPR000571 | GO:0046872 | |
Blo02g00066 | 353 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 127 | 146 | IPR000571 | GO:0046872 | |
Blo02g00066 | 353 | PANTHER | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 2 | 22 | 352 | - | - | |
Blo02g00066 | 353 | PANTHER | UNKEMPT FAMILY MEMBER | 22 | 352 | IPR045234 | - | |
Blo02g00066 | 353 | Gene3D | - | 121 | 184 | - | - | |
Blo02g00066 | 353 | ProSiteProfiles | Zinc finger C3H1-type profile. | 126 | 148 | IPR000571 | GO:0046872 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo02g00066 | Blo-Chr2:452529 | Blo11g00136 | Blo-Chr11:1060843 | 4.68E-58 | dispersed | |
Blo07g00496 | Blo-Chr7:11955000 | Blo02g00066 | Blo-Chr2:452529 | 3.56E-45 | dispersed | |
Blo14g00534 | Blo-Chr14:7801614 | Blo02g00066 | Blo-Chr2:452529 | 4.41E-60 | transposed | |
Blo15g00575 | Blo-Chr15:11906893 | Blo02g00066 | Blo-Chr2:452529 | 4.64E-174 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
11966 | PF00642 | zf-CCCH | 2.10E-06 | CL0537 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo02g00066 | K23047 | - | jre:108986638 | 392.504 |