Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00071 ATGGGTTGCGCCTTTACAAAACCTGCGGCTGTGGAAGATCATCGAGACAGCCCGAAAGGCAGATTGAAAGCAAATAAGGTATCACGATCGAATTCATCAAGAAGAGAAGAGGTTATTCAACAGAAAATAACGAGAAAAGAAGGGGAAATTCGATTGAACTCATCCAGAAGAGAAGAGAGGGTTCAATCCAAAAAGAAATTGGATCCAGGCGATGGGAAAACCGCGTCGTTTGATAGGAAATCTAACGTTTCGACTGGAATTCATGAGGATCAAAGTCAAACTGAGAAGAGGAAGGAGGAAATGGTAAAATCTGCCATTTCGGATTATCCTGGAAAGGGGAGAGTACCTAGGGCTGCAGAAGGAGAGCAAGTTGCAGCTGGGTGGCCGAGTTGGCTCTCCTCCGTCGCCAGTGAAGCGATAAAGGGTTGGATTCCTCGTCGGGCCGATACTTTCGAGAAGCTCGAAAAAATCGGGCAAGGAACGTATAGCAGCGTGTACAAGGCTCGAGACATAATTCACAATAAATTAGTAGCTTTGAAGAGAATAAGATTCGATAATCTCGATATAGAAAGTGTCAAGTTCATGGCAAGGGAAATCCTTATTTTGCGTCGGCTCGACCATCCAAACATCATAAAACTAGAAGCCTTGATTACTACCCCAAGATCTTGCAGCTTGTACCTCGTTTTCGAGTACATGGAACACGACCTTACCGGACTGGCATCTCGTCCAGGTCTCAAATTCACCGAACCACAGATTAAATGTTATATGCAACAACTTCTTCGGGGACTCAATCACTGTCACAAAAATGGTGTTTTGCATCGCGATATAAAGGGCTCGAATCTTCTGATCGATAACAATGGTCTATTGAAAATCGCGGATTTGGGTTTAGCGAGTTTTTATGATGCCCATAATAGCGCTCCTTTGACGAGTCGGGTAGTGACGCTTTGGTATAGGCCACCTGAGCTTTTGCTCGGAGTTTCCCACTATGGAGTTGCAGTCGATTTATGGAGCGTTGGTTGTATACTCGCAGAGTTATATGTCGGAAATCCATTTTTACCGGGAAAGACTGAGGTTGAACAACTGCATAAGATATTCAAGCTTTGTGGGTCGCCATCCGAGGATTATTGGAGAAAATTGCAGCCACCTCATGCAGCCGTTTTCAAGCCTGCACATCCGTACCGACGATGTGTTGCCGAATTGCTCAAGGAATATCCCCCTGCTGCTGTGGCTCTTATCGATACTTTGCTTTCTATCGATCCTTCTAAGCGAGGAACTGCAGCTACGGCTTTGAAGAGTCAGTTCTTCACGACTAAACCTTTCGCCTGTGATCCGTTTAGTTTGCCAAAATATCCTCCAAGCAAAGAGATCGACATGAAAATACGGGATGCGGCCAGAAGACAGGAGAAGGACGGAGGCAAAAGTGGCAATGGCGATGGGGAAGGCAGACGAGGGAGAGATTCAAAGGATTATCTTGATCCCAATGCGAAAGTGGAACTTGGAGCACCATTCTTGAGACGACAAGGCCATTCGAGCTCTGTGAGCAGGAGTGAGCTCTTCAATCCTAGAAGTGAGCAGCCAGTTTCCGGTTTTCTTGTAGCTCCGCCTAAACAAACTAGGCCGGAAAAAGAAGAAAGCCGAGAGATGAACTCTAACAGGCTTTCGCATTCCGGACCGCTGATAAATGAACCTACTCCTATGGCAACCAGAGCCAGTTTGTCAACACTTTCTGGTCTGGTTGCAACGAGGATTTCGACTTCTGAGGACCACCGAGATCGAGCCGGACCTTCACATTCCAACCCCATAAATCAACGGCACAGATCACCAAAATCAGTAATCGAGATGGAATCGACAAGAAAGTGCGATAGGAAACGGCATGCTCATCGAGTTGCAGATTCTTATCAGATTGAGAATCAAAAGTTTCATGTTAAACAGCCACCCCCAAATATTTCTGCAGCCATGGCCAACAAAATCTACACATCCGGCCCCATTCTGGGTTCGTCGGACAACTTCGAACAAATTCTGAAAGAACGAGACAGACAGATTCAAGAATTTGCTAGACAAGCTCGAAATGAGATTGGAGAGACAGGGGAGGTGGTAATGGAGAGATCCTTGGTTGGGTCAATCATGAGCATTCCGGCGAGTGGTATTAGTTCGAACGGAGCTGATGAAATTACCGGCAGCGAAGAGAGTTTCGCCGACGTATTTTTCGGGTTCTCGGATCAGATCGACAGTGCGCCGGAAAATTTAGCTAATGCCTGCGACGATGAGAGCGACGAGGAACAAAATATATGCGATAGTGATGAAAACAAAGCATTTTGGCAGACCCAAGAGGAGCTTCTTCTGGCGACGTTACGTCGGAGTAGTTCGATTGAGTTAAAAATCCGGCGAACAACGAATGACTTGCTAAAGGAATTAAATTCCGAATGCCTGCAATGTGGGTGCCGGAGATCGTTACCCGTCGGAGGGTGCCGGAGCTGCTTAAAACGAGAAATATGCAACCGGCTGCGAAATGCCGGCTACGACTGCGGAATCTGCCAGTCCAAGTGGAAGAGCTCGTCTAGCATTTCATCTGGAGAACATAGTTACTTAGAAGTGGCGGACAATTCCAGCGACAAGAAAGGAGAGGTTAGAGTCGTGATTGAGCTAAACTTCCGAGCCGAATTCGAGATTGCAAGAGCTAGCGAGGAGTACAACAGGCTGGTCAGCCTTCTGCCGGAGGTGTACATAGGAAAATCGGAGAGATTAACGGCGTTGATTAAGATCCTTTGCACGGCGGCGAAAAAGAGCATGAAGGAGAAGAAAATGCACTTAGGACCTTGGAGGAAGCAAAAATATATGCAGGCCAAGTGGCTGGGGACGTTTGATAGAACAACACCACCGTCGCCATTGCCGGTGAGTTTGTCCGACCGGCCACGGAAGGCGAAGGCGTCATTGCTGACCGATTTGGTGGAGAAGTTGTCCAATTTTCACTGCACTGCTGTTCCAGTCGTGTGA 2994 47.13 MGCAFTKPAAVEDHRDSPKGRLKANKVSRSNSSRREEVIQQKITRKEGEIRLNSSRREERVQSKKKLDPGDGKTASFDRKSNVSTGIHEDQSQTEKRKEEMVKSAISDYPGKGRVPRAAEGEQVAAGWPSWLSSVASEAIKGWIPRRADTFEKLEKIGQGTYSSVYKARDIIHNKLVALKRIRFDNLDIESVKFMAREILILRRLDHPNIIKLEALITTPRSCSLYLVFEYMEHDLTGLASRPGLKFTEPQIKCYMQQLLRGLNHCHKNGVLHRDIKGSNLLIDNNGLLKIADLGLASFYDAHNSAPLTSRVVTLWYRPPELLLGVSHYGVAVDLWSVGCILAELYVGNPFLPGKTEVEQLHKIFKLCGSPSEDYWRKLQPPHAAVFKPAHPYRRCVAELLKEYPPAAVALIDTLLSIDPSKRGTAATALKSQFFTTKPFACDPFSLPKYPPSKEIDMKIRDAARRQEKDGGKSGNGDGEGRRGRDSKDYLDPNAKVELGAPFLRRQGHSSSVSRSELFNPRSEQPVSGFLVAPPKQTRPEKEESREMNSNRLSHSGPLINEPTPMATRASLSTLSGLVATRISTSEDHRDRAGPSHSNPINQRHRSPKSVIEMESTRKCDRKRHAHRVADSYQIENQKFHVKQPPPNISAAMANKIYTSGPILGSSDNFEQILKERDRQIQEFARQARNEIGETGEVVMERSLVGSIMSIPASGISSNGADEITGSEESFADVFFGFSDQIDSAPENLANACDDESDEEQNICDSDENKAFWQTQEELLLATLRRSSSIELKIRRTTNDLLKELNSECLQCGCRRSLPVGGCRSCLKREICNRLRNAGYDCGICQSKWKSSSSISSGEHSYLEVADNSSDKKGEVRVVIELNFRAEFEIARASEEYNRLVSLLPEVYIGKSERLTALIKILCTAAKKSMKEKKMHLGPWRKQKYMQAKWLGTFDRTTPPSPLPVSLSDRPRKAKASLLTDLVEKLSNFHCTAVPVV 997
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 470828 479572 - BLOR09801 Blo02g00071 56301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00071 997 PANTHER CYCLIN-DEPENDENT KINASE 64 693 - -
Blo02g00071 997 Gene3D Transferase(Phosphotransferase) domain 1 239 474 - -
Blo02g00071 997 MobiDBLite consensus disorder prediction 1 115 - -
Blo02g00071 997 MobiDBLite consensus disorder prediction 464 493 - -
Blo02g00071 997 TIGRFAM A_thal_3542: uncharacterized plant-specific domain TIGR01615 828 957 IPR006502 -
Blo02g00071 997 ProSiteProfiles Protein kinase domain profile. 151 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo02g00071 997 SMART serkin_6 151 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo02g00071 997 MobiDBLite consensus disorder prediction 507 523 - -
Blo02g00071 997 ProSitePatterns Serine/Threonine protein kinases active-site signature. 271 283 IPR008271 GO:0004672|GO:0006468
Blo02g00071 997 MobiDBLite consensus disorder prediction 9 75 - -
Blo02g00071 997 MobiDBLite consensus disorder prediction 90 105 - -
Blo02g00071 997 MobiDBLite consensus disorder prediction 608 624 - -
Blo02g00071 997 MobiDBLite consensus disorder prediction 585 624 - -
Blo02g00071 997 Pfam PDDEXK-like family of unknown function 736 956 IPR006502 -
Blo02g00071 997 PANTHER CELL DIVISION PROTEIN KINASE 64 693 - -
Blo02g00071 997 Pfam Protein kinase domain 151 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo02g00071 997 MobiDBLite consensus disorder prediction 464 563 - -
Blo02g00071 997 CDD STKc_CDK9_like 151 435 - -
Blo02g00071 997 ProSitePatterns Protein kinases ATP-binding region signature. 157 180 IPR017441 GO:0005524
Blo02g00071 997 Gene3D Phosphorylase Kinase; domain 1 146 238 - -
Blo02g00071 997 SUPERFAMILY Protein kinase-like (PK-like) 145 440 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00071 Blo-Chr2:470828 Blo03g00652 Blo-Chr3:27727342 0 dispersed
Blo15g00569 Blo-Chr15:11648756 Blo02g00071 Blo-Chr2:470828 6.54E-148 transposed
Blo15g00568 Blo-Chr15:11540362 Blo02g00071 Blo-Chr2:470828 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84131 PF00069 Pkinase 1.90E-66 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00071 - - csv:101207826 831.632