Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00081 ATGGTAAAGAGCTGCGTACGATCAGTTTTGAAATTGGTAAATTCTGGGATTGGGATGATCGGGATCGCCATGATTTTGTACGGGGTGTGGTTGACGAGGGTGTGGCAGAGGGAAATGGGTCAATCGCCCTTCGGAGAATCCGATTTCCCAGCTCCATGGTTCATCTACGCATTTCTCTCCGTAGGGATTACTCTGTGCGTGATCACATGCTCCGGCCACATTGCTGCGGAAACTGCAAATGGTTGCTGCCTTTATTTGTACATGCTGTTTGTCTTCCTGCTTCTAATGGTTGAGGCCGGAATAACTGCCGATATATTTCTGAATCGAGACTGGGAGAAGGACTTTCCAAAAGATCCAAGCAGGAGCTTTGACCAGTTCAAAAACTTTATAAGATCAAATTTTGACATCTGCAAATGGATTTGCTTCTCAATCGTGACTACACAGTGTCTATCACTCTTACTGGCCATGATCCTCAAAGCTCTCGGACCGCATCAATGTTACGACAGTGATGAAGAACGTACACCTGCAAGGGTACCTCTTCTCAAGAATCTTTGCCCTTCTCGTGCTCTTGTTGACCCTATTTACGGATCCAAGAATGATGGGCGGAGCGTACGGATTAGCGACAAGATTAGTAGAACAAAAACTGTCGGCAGGGCGACATTTTCAGTTCTCAGCGCTTTTCGGCGACAGTTTGTTCACCTTCCGGCAAGCCCGATAATGCAGCCACTCCGTAGCCATGGTTTTTGCTCTGAGCTTTTTGGGTTTGGGTTTTGTTTACTGGTGCTGAGTCTTAAATGCTCCGTCGCTTTAGCTCAGCTCCGGCGCGCCGTCACTGACCTGCATTGGACACATGCGACGGCCACTTGGTATGGCAGCCCCGAAGGCGATGGCAGCGACGGGGGAGCTTGTGGGTATGGAAACTTGGTGGACGTGAAGCCATTAAAGGCTAGAGTGGGAGCAGTAAGTCCGGTGTTGTTTAAAAATGGCGAAGGCTGTGGCGCCTGCTACAAGGTCAGGTGCTTAGATAGTAGCATGTGTTCGAGTAGAGCCGTTACAATAATTGTCACCGACGAATGCCCCGGCGGCTACTGCGCCAATGGAAACACCCACTTTGATCTCAGCGGCGCCGCGTTTGGCCGTATGGCTGTGGCTGGGGAAGGTGATCAGCTGAGGAACCGAGGGGAAATTCCGGTCATCTACCAACGAACTCCATGCAAATATCCAGGAAAGAACATTGCCTTTCATGTCAATGAAGGTTCAACTGAATATTGGCTTTCACTCCTGGTTGAGTTCGAGGATGGAGATGGTGATATTGGATCAATGCATATAAAAGAATTAGCGGGGGTCGATTCGATTCCGGCAACTGGTTCCGTCTCAGCCGGAGTAGAAATATCTGGTTTTGGTGGGTCAGGAAGATCTTTAGAATTAGCATCTTTTGCAGGTGTGATTCTGTTGGTCTATTTGATCGTGGTCGCTGAAGGAGTCAAAAGAAGCCATTCTCGTAAGCTCTTTCTCTCCTCCCACTCTGTAAATCTATGGCTTCGTGAAGGTGTTTGTGTTATTCACGGGCGGGATTTGTCTCTATTGTGCGGCTCTTTGGTCGGGTTTCTTGCTCTTCAAAGCTCACCAAATTACCAAAAACTCAGACGATCCAAGTCTCTGCTCTGTCATTGCTCTGGCCGGCGACAGGTCATTCAGCTACTCTTATATTTGGCTAATTTACTGAAGACATGGCTTAGAGACGCGCCTCTCATTTGTGCGCGTGCTGTGCTCTTGGGGCTGCGGCTGCTAAACACAGTGGTGATCAACATGACTATGGAGATGCAGAATTCCAGCAAGCAATTGTAG 1848 48.65 MVKSCVRSVLKLVNSGIGMIGIAMILYGVWLTRVWQREMGQSPFGESDFPAPWFIYAFLSVGITLCVITCSGHIAAETANGCCLYLYMLFVFLLLMVEAGITADIFLNRDWEKDFPKDPSRSFDQFKNFIRSNFDICKWICFSIVTTQCLSLLLAMILKALGPHQCYDSDEERTPARVPLLKNLCPSRALVDPIYGSKNDGRSVRISDKISRTKTVGRATFSVLSAFRRQFVHLPASPIMQPLRSHGFCSELFGFGFCLLVLSLKCSVALAQLRRAVTDLHWTHATATWYGSPEGDGSDGGACGYGNLVDVKPLKARVGAVSPVLFKNGEGCGACYKVRCLDSSMCSSRAVTIIVTDECPGGYCANGNTHFDLSGAAFGRMAVAGEGDQLRNRGEIPVIYQRTPCKYPGKNIAFHVNEGSTEYWLSLLVEFEDGDGDIGSMHIKELAGVDSIPATGSVSAGVEISGFGGSGRSLELASFAGVILLVYLIVVAEGVKRSHSRKLFLSSHSVNLWLREGVCVIHGRDLSLLCGSLVGFLALQSSPNYQKLRRSKSLLCHCSGRRQVIQLLLYLANLLKTWLRDAPLICARAVLLGLRLLNTVVINMTMEMQNSSKQL 615
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 558897 564578 + BLOR09811 Blo02g00081 56311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00081 615 SUPERFAMILY Barwin-like endoglucanases 280 409 IPR036908 -
Blo02g00081 615 Gene3D - 267 405 IPR036908 -
Blo02g00081 615 PANTHER EXPANSIN-LIKE PROTEIN B1 249 448 - -
Blo02g00081 615 SUPERFAMILY PHL pollen allergen 410 451 IPR036749 -
Blo02g00081 615 PRINTS Major pollen allergen Lol pI signature 414 429 IPR005795 GO:0005576|GO:0019953
Blo02g00081 615 PRINTS Major pollen allergen Lol pI signature 430 445 IPR005795 GO:0005576|GO:0019953
Blo02g00081 615 PRINTS Major pollen allergen Lol pI signature 382 397 IPR005795 GO:0005576|GO:0019953
Blo02g00081 615 PRINTS Major pollen allergen Lol pI signature 320 331 IPR005795 GO:0005576|GO:0019953
Blo02g00081 615 PRINTS Major pollen allergen Lol pI signature 360 375 IPR005795 GO:0005576|GO:0019953
Blo02g00081 615 Pfam Expansin C-terminal domain 412 445 IPR007117 -
Blo02g00081 615 PRINTS Expansin/Lol pI family signature 322 340 IPR007118 GO:0005576
Blo02g00081 615 PRINTS Expansin/Lol pI family signature 281 296 IPR007118 GO:0005576
Blo02g00081 615 PRINTS Expansin/Lol pI family signature 393 409 IPR007118 GO:0005576
Blo02g00081 615 PRINTS Expansin/Lol pI family signature 299 317 IPR007118 GO:0005576
Blo02g00081 615 Pfam Lytic transglycolase 320 398 IPR009009 -
Blo02g00081 615 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 300 410 IPR007112 -
Blo02g00081 615 Pfam Tetraspanin family 9 111 IPR018499 GO:0016021
Blo02g00081 615 Gene3D - 406 465 IPR036749 -
Blo02g00081 615 PANTHER EXPANSIN-B3 249 448 - -
Blo02g00081 615 SMART dpbb_1 318 400 IPR007112 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00081 Blo-Chr2:558897 Blo07g00054 Blo-Chr7:773870 8.17E-48 dispersed
Blo13g00371 Blo-Chr13:21519812 Blo02g00081 Blo-Chr2:558897 5.46E-105 wgd
Blo15g00555 Blo-Chr15:10985963 Blo02g00081 Blo-Chr2:558897 1.78E-119 wgd
Blo02g00081 Blo-Chr2:558897 Blo04g00689 Blo-Chr4:6286723 3.26E-105 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00081 K20628 - rcu:8262087 332.413