Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00114 ATGGAGTTCTCTTTAACTGGGAGGACTGGTTATATCTTTATGAGTAGAACATTTCTTGTGTTCAGTTTGCATATGTGGCTGCTATTAGCAGTAATTGGTGGGACTGGAAATGATACTGGAAATGAGACTGGAAATGACAGTGCTTTGCCAAGTGTAGTGAATATTGGAGCTTTGTTTACGGTTGACTCGGTTATCGGAAAGTCAGCAAAGCCAGGAATTTTAGCTGCAGTTGATGATGTAAATGCCAATACAACTGTTCTTCCTCATATTAAGTTGAATGTGATCTTACAAGATACGAATTGCAGTGGTTTTCTAGGAACTGTGGAAGCTTTGCAGCTGATGGGAGACCGAGTTGTTGCTGCGATTGGTCCACAATCCTCTGGAATAGCTCACGTTATTTCCAATGTGGTCAATGAACTCCAAGTACCGCTTCTATCATTTGGATCAACAGATCCCACCCTTTCAGCTCTACAATACCCATATTTTGTTCGGACAACACAGAGTGATTATTTTCAGATGCAAGCAATCGCTGATCTGATAGATTATTACGGATGGAGGGAGGTCATTGCTATATTTGTCGATGATGATAATGGAAGAAATGGGATATCAGTCTTAGGCGATGCACTTGCTAAGAAGCGTGCAAAAATTTCTTATAAGGCCACCATCTCTCCCGGAGCCTCTGGAAGTGATATCAATGACGTGTTGGTTGAGGTAAATCTCATGGAATCTCGTGTGTATATCGTTCATGTCAATCCCGACTCTGGTTTGTCGGTATTTACTGATGCAAAGAGTCTTGGAATGATGGGTCCTGGCTATGTGTGGATAGCAACAGATTGGCTTCCTTCTTTTCTTGATTCACTAGAAACAGCTAGCTCGGATGTAATGAATCGCATACAAGGAGTCATTGCTCTTCGCCACCACATTCCCGACAATGATCTAAGAACGAATATCGGGTCGAAATGGAAGAATCTGAACTACAGTTCGACTATAAACTTAAATACTTATGCACTTTATGCATATGATTCCGTTTGGTTGGCAGCCCATGCTCTTGATGCTTTTTTCAAGGAAGGTGGTAATATATCTTTCTCCATTGACCCGAGGCTGCATGAAACAAGTAAAAGTGTGCTTCATTTAACATCCCTCCGCATTTTTGACGGGGGGGAACAACTTCTACAGACCATTTTAAGGACAAACTTCACTGGTCTGAGTGGTCAGATTCAATTTGATCAAGAGAAAAACTTGGTTCATCCAGCGTATGATATTCTCAACATTGTTGGAACTGGATCTCGTAGAGTTGGTTATTGGTCAAATCTTTCAAGTCTGTCTACTGCTCCTCCTGAAACTTTCTATACAACTCCATTCAACAGTTCTTCCAGTGGTCCAAGTCTATACAGTGTAATATGGCCAGGTGAGACGACAGCAACTCCTCGTGGATGGGTATTTCCGAACAATGGAAAGCCCCTTCAGATTGCAGTACCATACAGAGTGAGTTACATAGAATTTGTGTCGAAAGCCTCAAACCCTCCAGGGGTTAAAGGATTCTGTATTGATGTTTTTGAGGCTGCTGTAAACTTGTTGCCTTACCCGGTTCCTCATGAGTATATATTATTCGGAGACGGAAAGGAGAATCCTTCGTACAATGATATTGTTTACAATGTTTATCAAAATAAATTTGATGCTGCCGTTGGGGATATTACGATCGTGACAAATCGGACGAAGATCGTGGACTTCACTCAGCCTTTCATGGAGTCAGGACTTGTCGTAGTTGCTCCCGTTAAACAGGCTAAGTCCAATCCTTGGGCTTTCCTCAGCCCCTTCACAGTCCAAATGTGGTTTGTCACTGCTGCCTTCTTCCTTTTTGTGGGAGCAGTTGTCTGGATTCTTGAGCACCGCATTAATCAAGAATTTCGCGGCTCACCTCGACAGCAACTCATAACGATATTTTGGTTCAGTTTTTCAACAATGTTTTTTTCCCACAGAGAAAACACAGTGAGCACTCTTGGCCGATTTGTTCTGCTAATTTGGCTATTTGTCGTGTTAATTATTAATTCAAGTTACACTGCCAGCCTGACGTCGATCCTTACAGTGCAACAGCTGACTTCGAAGATTGGAGGAATTGATACCTTAATATCGAATAATGAACCGATTGGAATTCAAGTGGGATCCTTTGCTTATAATTATTTGACTCAGGAATTGAATATAGCACCATCTAGGATCATTAGGTTGAACGGGCCGGAAGAATATAGCAGCGCTCTGCTAAAAGGACCCGCAGGCGGTGGTGTGGCTGCCATCGTCGACGAGCTTCCGTATGTTGAGCGGTTTTTGACTGGCTCCAACTGTGCATTCAGGACTGTTGGGCAAGAGTTCACAAAAAGTGGATGGGGTTTTGCGTTTCAGAGGGACTCTCCGCTCGCCGTCGATTTATCAACTGCGATTCTTCAACTCTCGGAGAACGGCGATCTTCAGAAACTTCACGATAAATGGCTCGCGACTTCTCAATGCTCCATGGAACTAAACCAAGTCGTTGCAAATCAATTATCTCTCAATAGCTTTTGGGGACTCTTCCTTATTTGTGGCATTGCATGCCTAATCGCTCTTTTCCTCTTCTTCTTTCGGGTCATCGGTCAGTACCTCAAGTTCGTACCCGATCATGAAACCCCGGAGGATGATGTCGAAGCGATCGAGCCGGCCCGCCCGAGAAGACCGAGCCATTCGACTAGCTTCAAACACTTGATGAATTTTGTAGATAAGAAAGAAGTAGAGATTAAACATATGTTGAAGAGAAAGACGAGCGACGGAAAACAAGCTAGCCCGAGCTCGGAAGTACACGCAATTCCGACCCCATAA 2847 43.38 MEFSLTGRTGYIFMSRTFLVFSLHMWLLLAVIGGTGNDTGNETGNDSALPSVVNIGALFTVDSVIGKSAKPGILAAVDDVNANTTVLPHIKLNVILQDTNCSGFLGTVEALQLMGDRVVAAIGPQSSGIAHVISNVVNELQVPLLSFGSTDPTLSALQYPYFVRTTQSDYFQMQAIADLIDYYGWREVIAIFVDDDNGRNGISVLGDALAKKRAKISYKATISPGASGSDINDVLVEVNLMESRVYIVHVNPDSGLSVFTDAKSLGMMGPGYVWIATDWLPSFLDSLETASSDVMNRIQGVIALRHHIPDNDLRTNIGSKWKNLNYSSTINLNTYALYAYDSVWLAAHALDAFFKEGGNISFSIDPRLHETSKSVLHLTSLRIFDGGEQLLQTILRTNFTGLSGQIQFDQEKNLVHPAYDILNIVGTGSRRVGYWSNLSSLSTAPPETFYTTPFNSSSSGPSLYSVIWPGETTATPRGWVFPNNGKPLQIAVPYRVSYIEFVSKASNPPGVKGFCIDVFEAAVNLLPYPVPHEYILFGDGKENPSYNDIVYNVYQNKFDAAVGDITIVTNRTKIVDFTQPFMESGLVVVAPVKQAKSNPWAFLSPFTVQMWFVTAAFFLFVGAVVWILEHRINQEFRGSPRQQLITIFWFSFSTMFFSHRENTVSTLGRFVLLIWLFVVLIINSSYTASLTSILTVQQLTSKIGGIDTLISNNEPIGIQVGSFAYNYLTQELNIAPSRIIRLNGPEEYSSALLKGPAGGGVAAIVDELPYVERFLTGSNCAFRTVGQEFTKSGWGFAFQRDSPLAVDLSTAILQLSENGDLQKLHDKWLATSQCSMELNQVVANQLSLNSFWGLFLICGIACLIALFLFFFRVIGQYLKFVPDHETPEDDVEAIEPARPRRPSHSTSFKHLMNFVDKKEVEIKHMLKRKTSDGKQASPSSEVHAIPTP 948
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 837458 841291 - BLOR09844 Blo02g00114 56344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00114 948 PIRSF IGluLR_plant 14 947 IPR017103 -
Blo02g00114 948 Pfam Receptor family ligand binding region 71 426 IPR001828 -
Blo02g00114 948 SUPERFAMILY Periplasmic binding protein-like II 463 830 - -
Blo02g00114 948 CDD PBP1_GABAb_receptor_plant 54 445 IPR044440 -
Blo02g00114 948 Pfam Bacterial extracellular solute-binding proteins, family 3 543 829 IPR001638 -
Blo02g00114 948 Gene3D - 483 598 - -
Blo02g00114 948 Gene3D - 778 836 - -
Blo02g00114 948 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 66 82 - -
Blo02g00114 948 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 339 351 - -
Blo02g00114 948 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 126 154 - -
Blo02g00114 948 Pfam Ligand-gated ion channel 830 862 IPR001320 GO:0015276|GO:0016020
Blo02g00114 948 Gene3D - 599 732 - -
Blo02g00114 948 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 42 929 - -
Blo02g00114 948 Gene3D - 75 416 - -
Blo02g00114 948 Gene3D - 168 439 - -
Blo02g00114 948 SMART GluR_14 489 831 IPR001320 GO:0015276|GO:0016020
Blo02g00114 948 CDD GluR_Plant 486 829 - -
Blo02g00114 948 MobiDBLite consensus disorder prediction 932 948 - -
Blo02g00114 948 SUPERFAMILY Periplasmic binding protein-like I 47 480 IPR028082 -
Blo02g00114 948 MobiDBLite consensus disorder prediction 926 948 - -
Blo02g00114 948 PANTHER GLUTAMATE RECEPTOR 3.4 42 929 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo02g00114 Blo15g00499 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00114 Blo-Chr2:837458 Blo15g00499 Blo-Chr15:8416282 0 dispersed
Blo01g01642 Blo-Chr1:56222839 Blo02g00114 Blo-Chr2:837458 0 transposed
Blo05g00673 Blo-Chr5:22078313 Blo02g00114 Blo-Chr2:837458 0 transposed
Blo13g00469 Blo-Chr13:25423504 Blo02g00114 Blo-Chr2:837458 0 transposed
Blo15g00498 Blo-Chr15:8409922 Blo02g00114 Blo-Chr2:837458 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00114 K05387 - qsu:112026600 1341.64