Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00119 ATGCAACTGTTCGGGGAGGAGGAGGAACAACCGCCATTTTCGAACTGTCTCTCTCATCTTGGTAACCGCTCCCTCTCTATAAAACACCACTTCCGCCATGTCTGCAACCTTTTTTCCCCTTCTCCTCTCTTCTCCTCTGGTTTTCCTGCTTCTTCGACCATGATGAACTCCAATCTCAACTCGGCCGGAGCTTTAACCTCCCATTTCCCGTTCTCCGTCTCCCGCTCCGGCTCCGGCTCCACGTTTGCTGGTGCTGCTTCTTTGGAAGCGACTGCTCTGGCTTTCAAACGCCACCACCAGAATCCTCGCCGGAAGCGGTCTAAAATGATGAGAATTGACGACCATCAGGCTGCTGGGTCCGGTTCTAGCAGCTTTTCGAAGCAGAAATACGCCAAAAAGCCTGACCCGAACGCACCCAAAATCACCAGACCTTGTACCGAATGTGGGAAAAAGTTTTGGTCGTGGAAAGCGCTTTTTGGGCACATGAGGTGCCATCCTGAACGGCAATGGCGAGGTATAAACCCACCGCCGAATCTCCGGCCACCAAATATCTACCCCTCTAGCGATTTGGAATCTATGACAGAAGAAGATAAGGAGGTTGCAGCGTGTTTGCTTCTACTAGCAACGACTCCTACCACCATTGACGACTGCGCCGATCCGTCATGCCGATCGTTCGAGTGCTCGAGTTGCAAGAAAGTGTTCGGATCACACCAGGCTCTGGGCGGCCATAGAGCGACTCACAAAAACGTGAAAGGCTGCTTCGCCATTACGAGAAATGGTTCGGAGCCCGAAGACGATCAGATGGGCGAGCGAGAGAGGGATACATCAGCGGAGGAGAAGACGGCGGTGGCGTTCAGCCCAGGTGGACACAGGTGCAGTATTTGTACGAGGGTTTTCTCGAGTGGCCAAGCACTAGGTGGGCATAAGAGGTGCCACTGGGAAAAGAGCGAGGATCCGCCATTGGTGAGCCCTTTTGTTTCTTCTCCTGCAAGAGAAGGTTGTGGACATTTGGATTTGAATATGCCTCCGCCATTGGAGGATGATTACTCCTCATCTTCTTATTCTTCTGGCCTAGCTCTGGATTTGAGGTTGGGTCTATGA 1101 52.41 MQLFGEEEEQPPFSNCLSHLGNRSLSIKHHFRHVCNLFSPSPLFSSGFPASSTMMNSNLNSAGALTSHFPFSVSRSGSGSTFAGAASLEATALAFKRHHQNPRRKRSKMMRIDDHQAAGSGSSSFSKQKYAKKPDPNAPKITRPCTECGKKFWSWKALFGHMRCHPERQWRGINPPPNLRPPNIYPSSDLESMTEEDKEVAACLLLLATTPTTIDDCADPSCRSFECSSCKKVFGSHQALGGHRATHKNVKGCFAITRNGSEPEDDQMGERERDTSAEEKTAVAFSPGGHRCSICTRVFSSGQALGGHKRCHWEKSEDPPLVSPFVSSPAREGCGHLDLNMPPPLEDDYSSSSYSSGLALDLRLGL 366
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 890731 891924 + BLOR09849 Blo02g00119 56349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00119 366 ProSitePatterns Zinc finger C2H2 type domain signature. 145 165 IPR013087 -
Blo02g00119 366 SUPERFAMILY beta-beta-alpha zinc fingers 144 247 IPR036236 -
Blo02g00119 366 MobiDBLite consensus disorder prediction 96 142 - -
Blo02g00119 366 SUPERFAMILY beta-beta-alpha zinc fingers 289 315 IPR036236 -
Blo02g00119 366 MobiDBLite consensus disorder prediction 257 277 - -
Blo02g00119 366 MobiDBLite consensus disorder prediction 263 277 - -
Blo02g00119 366 SMART c2h2final6 143 165 IPR013087 -
Blo02g00119 366 SMART c2h2final6 225 247 IPR013087 -
Blo02g00119 366 SMART c2h2final6 290 312 IPR013087 -
Blo02g00119 366 ProSitePatterns Zinc finger C2H2 type domain signature. 227 247 IPR013087 -
Blo02g00119 366 ProSiteProfiles Zinc finger C2H2 type domain profile. 143 170 IPR013087 -
Blo02g00119 366 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 75 366 - -
Blo02g00119 366 Pfam C2H2-type zinc finger 144 167 - -
Blo02g00119 366 Pfam C2H2-type zinc finger 225 248 - -
Blo02g00119 366 Pfam C2H2-type zinc finger 290 314 - -
Blo02g00119 366 ProSiteProfiles Zinc finger C2H2 type domain profile. 225 252 IPR013087 -
Blo02g00119 366 ProSiteProfiles Zinc finger C2H2 type domain profile. 290 317 IPR013087 -
Blo02g00119 366 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 75 366 - -
Blo02g00119 366 ProSitePatterns Zinc finger C2H2 type domain signature. 292 312 IPR013087 -
Blo02g00119 366 Gene3D Classic Zinc Finger 222 312 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00119 Blo-Chr2:890731 Blo07g00054 Blo-Chr7:773870 1.02E-29 dispersed
Blo04g00864 Blo-Chr4:9520933 Blo02g00119 Blo-Chr2:890731 3.71E-07 transposed
Blo02g00119 Blo-Chr2:890731 Blo07g00855 Blo-Chr7:26938815 3.53E-06 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11975 PF13912 zf-C2H2_6 5.10E-11 CL0361 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00119 - - pvy:116112838 290.041