Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00136 ATGGCTCAGAATTGCAAGTTCTGTGTTTCTTGTGGAAAAGTATCGGCTGGGTTTAGGTTGAAGAAGGTGAAGGAGGATGGGAATGTCCTTTCTTCGATAACAGGGTGGAAAAGAAAGGTTCTTGTTCTATGTGCTGTAGGATTAGTTTTCATTTTCAGTATCTGTTTTTTCTGGAGTTCTTTCGATGGTTCATGGACGTCTAAACAAAAGCCCTTGAGTTCATTCGGAGGCAAAACTGAAACCTTTCTGCAACATTTCAATGTCAGCAATAATCACTTTCTGTTCCTTAGTTCTGTATTTGCCAAATCAGATCAGATAGTGTCATTGCAATGTACTAAAGGTTCGAGTCCTGACATGCATATCAAAAATGACATTTCTTGTGCTTTGAAGGTACTATCCTCAGAGGAGATACTGGTCCGACAGGATCAATTGATCGAAGAGCACGTAGAATCAAACGATCAATGCCCAATTCTCGATGAGAAGATCCCAAATTACTTCGATCAGTTTCTCTCTCACGATAAGAGAATATTAGCTTCAGATTCTTTGATTTCGTCAAAACCTACTGATATTCACTCTTTCGAAAAGAAGATCTTGCAAACAAGGGTATTCCCGAGCTGTGTGAAAGATTGTTGCGAAAGTTTATGTAGTCTCCTCAAGGGAAGCTTGTGGGTGATTTTTGGAGTGATTATGTATCAGATGATCCCTTGTTTTGACTTAAAATTGTGGTGGATTCAAAATGAACTGGTAGACCAAAATATTCAGCAACAGCCAGTGGCTAATCAGGTGTCATCCCAGCAAAAGCAGCAGAAGGCGTTTCCTCAGCAAGTACAGCCTCATCATGCCAAGAATCCTCCTAAAGCGGCTGGAAAGTGGAGGAAGAAGCTTCTACTACTATTTTACTTCCATCTACTTTATAAAATTTTTGGTGAATACACTGAAAGAACGGCTTTTGAGAGACCTTTAACCAGTGGTGTTGCATATGCTTTAAGAGTGAACCACTTGGAAAGAGATCTATTTGAGAAAAAACATGGGTGGACAATAAGGAAAATGGAAACTGAGGACCAGACCCTGGTTCGAGATTGTATCCCAGAAAGTTTGGACCCTGCACCTATTCAAAAGGAATATGCACCTGTAATATTTTCCCAAGAAACTGTCTCCCATATTGTCTCTATTGACATGATGTCTGGAAAGGAAGATCGTGAAAACATATTGCGGGCCAGAGCGTCTGGGAAGGGAGTACTTACATCGCCTTTTAAGCTACTGAAATCCAATCATCTTGGTGTTGTTCTAACATTTGCTGTATATAATAAGGAGCTTCCTCCCAATGCTACACCAGATCAACGTGTTGAAGCTACTGTCGGGTATCTTGGGGCATCTTATGATGTCCCGTCTCTGGTGGAGAAGCTTCTGCACCAGCTTGCCAGCAAACAGACAATCGTTGTGAATGTATATGATACAACGAATGATTCTTCTCCCATAAAGATGTACGGTTCAGATTTCACTGATACAGGGCTACTTCAAGTTAGCAACCTTGATTTTGGTGATCCACAGAGGAAGCATGAGATGCATTGTAGGTTCAAACAAAAACCAACCTTACCGTGGACGGCAATAAATGCATCAGTGGCAGTCCTTGTCATTACTCTCCTAGTTGGCCATATATTTCACGCTGCTATTTGTCGAATTGCGGAAGTTGAGAACGATTGTCGGGAGATGACGGAGCTCAAACTTCGTGCCGAAGCTGCAGATGTGGCAAAATCTCAGTTTCTTGCAACTGTTTCCCATGAGATCAGGACACCAATGAATGGGGTATTAGGAATGCTAAAATTGCTGATGGACACGGACCTTGATGAAGAACAACTGGACTATGCTCATACTGCCCATGCCAGTGGAGAAAGTTTAATATATCTTATAAATGAGGTCCTTGATCAGGCTAAGATAGAATCAGGCAGGCTTGAACTTGAATCTGTACCTTTTGATCTTCGAGCTGTACTTGATAACGTTTTCTCACTTTTGTCTGTCAAATCTAATGAAAAGCGAATTGAGCTTGCTGTTTATGTCTCTTCGCTGGTACCCGAAGTTGTGATTGGTGATCCTGTCCGATTCGGGCAGATAATCACAAATCTTGTTGGAAATTCTATTAAGTTTACTCATAACAAAGGACATATCTTCATCTCAGTGCATCTGGCAGATGAAGTTTGGGGTCCACTTGATATGGATGAAGTCCTGAAATTGAGTTTAGTTAAAGGCACATCGAGCAATGCCTATAATACGCTTAGTGGGTTTCCTGTCGTTGATAGATGGAAAAGCTGGAAACTTTTCAAGAAATTTTGTAGGACAGATGCTACTGAGCATTCAGATATGATCAAATTATTGGTTACTGTTGAGGATACGGGTGTGGGGATTGCTCTAAACGCTCAAAGCCAAATCTTCACACCTTTCATGCAGGCCGATAGTTCCACATCGAGGACTTATGGTGGGACCGGAATAGGATTAAGCATTAGCAAATGTCTTGTGGCTCTCATGGATGGAGAGATTGGCTTTGTGAGTGAACCGGGAACTGGAAGTACGTTTTCATTTACGGGGTCTTTTAGAAGAGGGGAAAGTAGTTCCCTTGAAGCAAAAGGGCAGCAGTATGATCCAGTTGTGACGGAATTTCGAGGGCAGAAGGCCTTGATAATAGATAATAGCAGAATACGAGCCGAGGTTACCAAATCTTATCTTTATAGATTGGGGATCTCTGTCGATATTGCTTTCAGTCTCGGATGCATCTACCAATATCTGTCTAATACCAACAGTGTGTCAAGTGATTTGGCAATGGTACTTATTGATGAAGACGTATGGGACAAAGAAGGGGGTCTGAAATTCCATCAAAGCCTAAAAGAGCTTGTAGAAAACAGCGCAGAAGAAGCCCGGAAAAGCATTCCTAAGATTTTTCTGTTGGCTACATCTATCAGTCCCAATGAACGAAACAAGCTAAGGTCAGCAGGACTTGTAAATGACGTAATGACGAAGCCTCTACGATTAATTGGCATGATTGATTGCTTCCAAGAGGCGTTGGGAGGCGGTAAGAAGAGACAAATAAATAGAAAGAAACCATCTACTCTTGGGACCTCACTCAGAGGAAAGAACATTTTGGTGGTGGATGATAATGTAGTCAACAGAAGAGTTGCAGAAGGTCATCTGAGGAAATATGGAGCGATTGTCACCTGTGTGGAAAGCGGCCGAGATGCACTTTCCATGCTTAAACCACCCCACAAATTTGATGCATGTTTTATGGATCTTCAGATGCCAGAGATGGATGGGTACTATGAAGCAACGAAGCAAATCCGACGATTGGAAAGAGAGGCTAACGAGAAAATTGCATCTGGAGAAGCGTCGGTTGAGGTGTTTGGAAATGTGGCCCATTGGTACACACCAATATTGGCCATGACTGCAGATGTAATTCAAGCTACAAACGAAAAGTGTATGAAGTGCGGGATGAATGATTACGTATCAAAGCCGTTTGCCGAAGAACAACTCTATGCTGCAATATCACGTTTCTTTGAGTCTGGCTGA 3555 42.0 MAQNCKFCVSCGKVSAGFRLKKVKEDGNVLSSITGWKRKVLVLCAVGLVFIFSICFFWSSFDGSWTSKQKPLSSFGGKTETFLQHFNVSNNHFLFLSSVFAKSDQIVSLQCTKGSSPDMHIKNDISCALKVLSSEEILVRQDQLIEEHVESNDQCPILDEKIPNYFDQFLSHDKRILASDSLISSKPTDIHSFEKKILQTRVFPSCVKDCCESLCSLLKGSLWVIFGVIMYQMIPCFDLKLWWIQNELVDQNIQQQPVANQVSSQQKQQKAFPQQVQPHHAKNPPKAAGKWRKKLLLLFYFHLLYKIFGEYTERTAFERPLTSGVAYALRVNHLERDLFEKKHGWTIRKMETEDQTLVRDCIPESLDPAPIQKEYAPVIFSQETVSHIVSIDMMSGKEDRENILRARASGKGVLTSPFKLLKSNHLGVVLTFAVYNKELPPNATPDQRVEATVGYLGASYDVPSLVEKLLHQLASKQTIVVNVYDTTNDSSPIKMYGSDFTDTGLLQVSNLDFGDPQRKHEMHCRFKQKPTLPWTAINASVAVLVITLLVGHIFHAAICRIAEVENDCREMTELKLRAEAADVAKSQFLATVSHEIRTPMNGVLGMLKLLMDTDLDEEQLDYAHTAHASGESLIYLINEVLDQAKIESGRLELESVPFDLRAVLDNVFSLLSVKSNEKRIELAVYVSSLVPEVVIGDPVRFGQIITNLVGNSIKFTHNKGHIFISVHLADEVWGPLDMDEVLKLSLVKGTSSNAYNTLSGFPVVDRWKSWKLFKKFCRTDATEHSDMIKLLVTVEDTGVGIALNAQSQIFTPFMQADSSTSRTYGGTGIGLSISKCLVALMDGEIGFVSEPGTGSTFSFTGSFRRGESSSLEAKGQQYDPVVTEFRGQKALIIDNSRIRAEVTKSYLYRLGISVDIAFSLGCIYQYLSNTNSVSSDLAMVLIDEDVWDKEGGLKFHQSLKELVENSAEEARKSIPKIFLLATSISPNERNKLRSAGLVNDVMTKPLRLIGMIDCFQEALGGGKKRQINRKKPSTLGTSLRGKNILVVDDNVVNRRVAEGHLRKYGAIVTCVESGRDALSMLKPPHKFDACFMDLQMPEMDGYYEATKQIRRLEREANEKIASGEASVEVFGNVAHWYTPILAMTADVIQATNEKCMKCGMNDYVSKPFAEEQLYAAISRFFESG 1184
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1157458 1164162 - BLOR09866 Blo02g00136 56366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00136 1184 CDD HATPase_EvgS-ArcB-TorS-like 701 860 - -
Blo02g00136 1184 Pfam Response regulator receiver domain 1044 1177 IPR001789 GO:0000160
Blo02g00136 1184 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 570 650 IPR036097 GO:0000155|GO:0007165
Blo02g00136 1184 CDD REC_hyHK_CKI1_RcsC-like 1044 1177 - -
Blo02g00136 1184 Coils Coil 561 581 - -
Blo02g00136 1184 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 638 860 IPR036890 -
Blo02g00136 1184 ProSiteProfiles Response regulatory domain profile. 889 1019 IPR001789 GO:0000160
Blo02g00136 1184 SMART REC_2 1042 1177 IPR001789 GO:0000160
Blo02g00136 1184 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 696 860 IPR003594 -
Blo02g00136 1184 Gene3D - 882 1021 - -
Blo02g00136 1184 SMART CHASE_2 308 498 IPR006189 -
Blo02g00136 1184 SMART HKATPase_4 696 865 IPR003594 -
Blo02g00136 1184 ProSiteProfiles Response regulatory domain profile. 1043 1181 IPR001789 GO:0000160
Blo02g00136 1184 SUPERFAMILY CheY-like 884 1019 IPR011006 -
Blo02g00136 1184 PRINTS Bacterial sensor protein C-terminal signature 790 804 IPR004358 GO:0016310|GO:0016772
Blo02g00136 1184 PRINTS Bacterial sensor protein C-terminal signature 849 862 IPR004358 GO:0016310|GO:0016772
Blo02g00136 1184 PRINTS Bacterial sensor protein C-terminal signature 808 818 IPR004358 GO:0016310|GO:0016772
Blo02g00136 1184 PRINTS Bacterial sensor protein C-terminal signature 825 843 IPR004358 GO:0016310|GO:0016772
Blo02g00136 1184 CDD HisKA 584 645 IPR003661 GO:0000155|GO:0007165
Blo02g00136 1184 SUPERFAMILY CheY-like 1039 1181 IPR011006 -
Blo02g00136 1184 Pfam CHASE domain 308 496 IPR006189 -
Blo02g00136 1184 ProSiteProfiles CHASE domain profile. 308 523 IPR006189 -
Blo02g00136 1184 Gene3D CHASE domain 306 530 IPR042240 -
Blo02g00136 1184 PANTHER TWO-COMPONENT HISTIDINE KINASE 278 1183 - -
Blo02g00136 1184 Gene3D - 1022 1181 - -
Blo02g00136 1184 Pfam His Kinase A (phospho-acceptor) domain 584 649 IPR003661 GO:0000155|GO:0007165
Blo02g00136 1184 Gene3D - 556 647 - -
Blo02g00136 1184 SMART HisKA_10 584 649 IPR003661 GO:0000155|GO:0007165
Blo02g00136 1184 PANTHER HISTIDINE KINASE 2 278 1183 - -
Blo02g00136 1184 Gene3D - 648 865 IPR036890 -
Blo02g00136 1184 MobiDBLite consensus disorder prediction 267 287 - -
Blo02g00136 1184 ProSiteProfiles Histidine kinase domain profile. 591 865 IPR005467 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01429 Blo-Chr1:53123294 Blo02g00136 Blo-Chr2:1157458 1.62E-11 dispersed
Blo02g00136 Blo-Chr2:1157458 Blo11g00965 Blo-Chr11:21758860 0 dispersed
Blo02g00136 Blo-Chr2:1157458 Blo12g00277 Blo-Chr12:16640388 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11978 PF03924 CHASE 6.30E-32 CL0165 Blo TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00136 K14489 - zju:107417004 1314.29