Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00138 ATGGCTACCTCTGCTGTCCAACAGTCCTCCTTCGCCGGCCAGACCGCCCTCAAGCAGTCCAATGAGCTCCTCCGCAAGGTTGGTGCCTCCGCCTCGAATGGCGGCCGTATCACCATGCGCCGGACTGTGAAGAGTGCTCCTCAAAGCATTTGGTACGGTCCAGATCGTCCGAAGTACTTGGGACCATTTTCCGAGCAAACTCCGTCGTACCTGACCGGAGAGTTCCCCGGAGACTATGGCTGGGATACCGCTGGTTTGTCGGCAGATCCCGAGACGTTCGCCAAGAATCGGGAGCTGGAAGTGATCCACAGCCGGTGGGCCATGCTTGGGGCTCTGGGTTGTGTCTTCCCGGAGATTCTATCGAAGAACGGCGTGAAGTTCGGCGAGGCGGTCTGGTTCAAAGCCGGATCTCAAATCTTCTCCGAGGGTGGCCTGGACTATCTCGGAAACCCAAATCTGATTCACGCTCAGAGCATTCTAGCCATCTGGGCTTCACAGGTTGTTCTAATGGGGTTAATCGAAGGCTACAGAGTCGGCGGAGGGCCTCTCGGTGAAGGCCTCGACCCAATCTACCCAGGTGGATCATTTGACCCACTTGGGTTGGCCGATGATCCCGAGGCGTTTGCAGAGTTGAAGGTGAAAGAGCTTAAAAACGGAAGACTTGCAATGTTCTCCATGTTTGGATTCTTCGTTCAGGCAATCGTCACCGGAAAAGGTCCGATCGAGAACCTCTCCGACCACCTCGCCGACCCAGTAGCTAATAATGCATGGGCTTACGCCACCAACTTCGTGCCTGGGAAATGA 804 55.85 MATSAVQQSSFAGQTALKQSNELLRKVGASASNGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRVGGGPLGEGLDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPVANNAWAYATNFVPGK 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1181364 1182250 - BLOR09868 Blo02g00138 56368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00138 267 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 267 IPR001344 GO:0009765|GO:0016020
Blo02g00138 267 Pfam Chlorophyll A-B binding protein 68 233 IPR022796 -
Blo02g00138 267 SUPERFAMILY Chlorophyll a-b binding protein 50 264 - -
Blo02g00138 267 Gene3D Chlorophyll a/b binding protein domain 58 260 - -
Blo02g00138 267 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 267 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo02g00138 Blo15g00451 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00138 Blo-Chr2:1181364 Blo14g00843 Blo-Chr14:30803394 9.50E-155 dispersed
Blo16g00889 Blo-Chr16:36559425 Blo02g00138 Blo-Chr2:1181364 1.95E-63 transposed
Blo03g01424 Blo-Chr3:40809988 Blo02g00138 Blo-Chr2:1181364 5.80E-113 transposed
Blo15g00451 Blo-Chr15:6642911 Blo02g00138 Blo-Chr2:1181364 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00138 K08913 - zju:107416999 520.776