Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00140 ATGTTATCAATATACCTATTTGGATCAACTTCGCTGTCAAGTTTAATTGCTCGAACTTCTGATGATATTGATGAAGACTTGATTCAAATTTCAAACACTTCACAAATTAAAACAAGATTAGGTCTTCCTAAACAGAATAGGTTGTCAATTCTGCTAGAGGAGCGGAATCGGTTGCCTCCTAGAAACTCGGATCTATATCCGACTCTCGCCAAAGATCATATCACGATTGTTTTATATGTCCACAACCGCCCACAGTATCTCAAGATAGTAGTACAGAGACTTTCAAAAGTTGTAGGAATAGATGAAACTTTGCTGATAGTTAGCCATGATGGGTTCTTTGAAGAAATGAACAAGATTGTTGAAAAGATCAGATTTTGCCAAGTCAAACAGATTTTTGCTCCTTATTCTCCTCATGTTTTCTCGAATAGTTTTCCGGGTGTATCACCAGATGACTGTAAGGAAAAGGAGGATAACTCGAAGGGACATTGCCAAGGAAATCCCGACCAATATGGAAGCCATCGTTCTCCAAAGATTGTCTCTCTCAAGCATCACTGGTGGTGGATGATGAACACCGTGTGGGACGGGCTAAAGGAGACAAAAGGGCATTCTGGTCATATACTTTTCATCGAGGAGGATCATTTTATATTTCCAAACGCATACCGTAACATCCAGATCCTCACAGAACTGAAGCCAAAGAAGTGCCCTGACTGCTATGCTGCAAATCTAGCACCTTGTGATGTAAATTCAAGAGGAGAAGGTAGCAATTTCCTGTTTGCAGAGAGAATGGGGAATGTGGGTTATGCTTTTAATCGAACGATTTGGAGGAAAATTCGCAAAAAGGCGAAAGAATTCTGCTTCTACGATGATTACAATTGGGATATAACGATGTGGGCAACTGTTTATCCCTCGTTTGGCAGCCCTGTTTACTCGCTGCGAGGTCCTTGGAGTAGTGCAGTTCACTTCGGCAAATGCGGTTTGCATCAAGGTCAGAGCGATAAGAAAGCTTGTATTGATAACGGTGTGGTTAATATTCAAGTTGGGGAGACAGATAAGGTTGCTAATATAAATTCAGAGTGGGAAGTTCAAGTTATTAAGAATCAGCCTGGCTATAAAGCAGGATTCAAGGGCTGGGGAGGCTGGGGAGATGAAAGAGACCGCAATTTATGCTTAAATTTTTCCCGAATAAGATCTAATGCTTCTGGTAATGATGTGTATCAAATCATTTGTCTGTTAAAGTTAGGTTCTTGCACGAATTTGCTCGATCTTTACATCGAAACTGTCTTCATCGAACTTGCATTCTCTTGTCAAGAATTTAGATGTTATACTAGACTTAATCCACCTCAAAGTAGAGTGCTTTCTTCACTGATATCATCTGATCTGCAGAGCTCTGTTGGGATAGTGAAGCTTATTTTGAGAATTGTTCTGGTCGAGCCTGAGCTGCAATATGGCGGTGGATTTCTTAGTACGTATTCCATACCCATCCTTAAGACCCCTATAGATGCTAAACTTCATGCGGAATTTGAGGAGGCTGAGCAGGCTTTTGATTACTCTACTTCAATTGACTTCAACCTCTCTTGCTCCACTAGCAATGTCCCGTCTTCCGCAGTCTCAGCTTACCTTCAAAAGATGCAGAGGGGACAGCTGATTCAACCTTTTGGTTGCATGATTGCCATTGATGAGGAGAAGTTTTCTGTTCTTGCATACAGTGAAAATGCCCCCGAAATGTTGGACTTGGCGCCACTTGCTGTTCCGAGCATGGAGCAGCAAGATGCACTGACTTTCGGAACCGATGTTCGGACACTTTTTCAGACTTCGGGCGTTGCTGCCCTGCAAAAAGCAAGCAAAATTAGGGAAGTCAATCTTCTAAATCCTATATTGCTTCACTGTAAAACCTCAGGAAAGCCTTTTTACTCAATTCTTCACCGAATTGATGTTGGTTTGGTTATAGATTTAGAACCTGTTGATCCAGCTGATGTGCCAGTGACTGCTGCCGGGGCATTGAAATCGTATAAGCTTGCAGCCAAAGCCATCTCAAAATTGCAATCTCTGCCAAGTAGGAATATTTCTTTGTTGTGTGATGTATTAGTTAAAGAAGTTAGTGATTTGACGGGTTATGATCGGGTTATGGTGTACAAATTTCATGAAGATGAACATGGAGAAGTTGTGGCAGAATCCCACCGGTCTGATATGGAACCTTATTTAGGTTTGCATTATCCAGCTACGGATATCCCACAAGCATCAAGATTTCTATTTATGAAGAACAAGGTAAGGATGATATGTGATTGTTCAGCTTCTCCGGTTAAAGTTATTCAAGACAACCATTTGGCTCAACCGTTGAGCCTTTGCGGATCGGTTTTGAGATCTCCCCACGGTTGTCATGGACAGTATATGGCGAATATGGGTACAGTTGCGTCTCTTGTTATGTCTGTAACGATTGAGGAGGACGGTAATGGGATGGAGAGTGATCAGCAGAAAGGCAGAAAATTGTGGGGCTTAGTGGTTTGTCATCATAGAAGCCCTCGGTTTATCTCCTTTCCTTTGCGATATGCCTGTGAGTTCTTGATTCTAGTTTTTGGTATTCAAATCAACAAAGAAGTGGAGTTGGCTGCTCAACTGAGGGAGAAGCATATTTTGCAAACTCAAGCTGTTCTTTGTGATATGCTTCTTAGAGATGTCCCTGTCGGAATTGTTATTCAATCGCCTAATATAATGGATCTCGTCAAGTGCGATGGAGCCGCACTTTACTACAAGAAGAAATTCTGGTTGCTTGGAATTACTCCTACCGAGGCTCAAATTAGAGATATAGCCGATTGGCTTCTTCAGAACCATGGTGGGAGCACTGGGTTGAGTACCGATAGTCTTGCGGAAGCTGGCTACCCAGGTGCCTCCGGTTTAGGCAATGAGGTTTGTGGAGTGGCTACCATTAAAATCACTGCAAAGGATTTTCTCTTTTGGTTTCGGTCCCACATGGCGAAGGAAATCAAGTGGGGAGGTGCAAAACATGATCCTAATGACAAGGACGACTTCCAGAAGATGCATCCACGGTCGTCTTTCAAGGCCTTTTTGGAGGTCGTGAAGCAAAGAAGTTCACCTTGGGAAGACGTGGAAATGGATGCCATCCATTCTTTACAGCTCCTAATGCGAGGATCTCTACAGGATGAGATAGAGGAAGACTCCAAAATGATTGTGAATATTCCATTGGCCGATGACAGAATGCAAAGTTTGGACGAATTACGGGTCGTAACCAATGAAATGGTTCACCTTATCGAGACAGCTGCCGTCCCCATCTTGGGTGTAGATTCCTTGGGCATTATAAATGGGTGGAACAACAAAGCTAGTGAACTAACAGAACTGCCAGTACAACAAGCAATCAACAAACTCTTTGTTGATGTAGTTGCGGATGAGTCGGTTGAGGTGGTGAAGAATATGCTTTCCTTGGCTTCGCAAGGTAAAGAAGAGCGAAACGTGGAAATTAAGCTCCGAACACATGGACCCAAACAAAGAAACGGTTCGGTCATTTTAGTAGTTAACGTTTGTTGTAGCCGAGACGCAAAGGGAAATATTGTGGGGAGTTGCTTTGTTGGGCAGGATGTTACTGGTCAAAGACTCATCATGGACCAATATACCCGTCTGCAAGGCGATTATGTCGGAATCATCCACAGCCCCTCTACACTAATTCCTCCAATTTTTATGACTGATGAGCACGGCCGATGCACGGAATGGAACGATGCTATGCAAAAATTATCTGGGATGAAGAGAGAAGAGGCTGTTGAGAAGATGCTTGTCGGAGAGGTTTTCACTCTCGACAGTGTCGGTTGTCGCGGCAAAGATCAAGACACATTAACAAAGCTTAAAATTTTATTCAATAGGGTGGTCACCAACCAAAACGTGGATAAATTGTTGTTTGGTTTCTTTGATAGACAAAGCAATTACGTCGAAGCATTACTTTCTGCAGACAGAAGGATAGATGCAGAGGGAAGAATAACGAGGGTTCTATGCTTTTTGCATGTGGCAAGTCCTGAACTTAAATATGCTATCCATATGCAGAAAATATCCGAACAGGCTGCCGATGATAGCGTCAAGAAATTGACATACTTTCGGTGGGAGATCAAAAAACCTCTTAGTGGGATTAAGTTTATGCAGAATCTCATGGATTCTTCCGATTTAAGCGCGGATCAAAAGCAGCTACTTCGGATAAGCACATCCTGTCAGGATCAATTAACCAAGATTGTTGACGGCACTGATACTGAAAATTTAGAAGAATGCTTTATGGAGGTGAACTCACTGGAATTCAACGTTGCGGATGTTCTCGAAGTTGTCATGAATCAAGTCATGATATTAGGACAAGAACGGCAGATTCAGGTCATCCTCGATTCTCCTCTGGATGCTTCGTCGTTGAATTTGTATGGGGACAAGTTAAGGCTTCAGCAAGTGCTTTCAGATTTTATGAGCAGCGCTGTCCTCTTTGTCCCAGAATCTGAAGGATCTTCGGTTTCGCTTGAGGTGATTGCGAAGAAAAATCATATTGGATCGAAAATATGTATAGTTCATCTTGAATTCAGTCAGGTTGTGAAAATTCAAATTATTTGGCGATCATCGGCTGTGGAACATGTAACTTCTTGGCCGGGATGTTCTTCGAGAATCGATTTGAACAAAGTGGACGACCGGGACCCAGAGTGTAGAGATAAACAGCAAACCGATCCGATCAAAAGACAAAAAATGGATTGCAAATTTGCTCTTTTTTCTTCGAAAATCTGGAAGACAGACTCGGATTTTCCATGTGAGTTTGTCGTTTTAATGGAGAAAGTTACTTTCTGA 4818 42.42 MLSIYLFGSTSLSSLIARTSDDIDEDLIQISNTSQIKTRLGLPKQNRLSILLEERNRLPPRNSDLYPTLAKDHITIVLYVHNRPQYLKIVVQRLSKVVGIDETLLIVSHDGFFEEMNKIVEKIRFCQVKQIFAPYSPHVFSNSFPGVSPDDCKEKEDNSKGHCQGNPDQYGSHRSPKIVSLKHHWWWMMNTVWDGLKETKGHSGHILFIEEDHFIFPNAYRNIQILTELKPKKCPDCYAANLAPCDVNSRGEGSNFLFAERMGNVGYAFNRTIWRKIRKKAKEFCFYDDYNWDITMWATVYPSFGSPVYSLRGPWSSAVHFGKCGLHQGQSDKKACIDNGVVNIQVGETDKVANINSEWEVQVIKNQPGYKAGFKGWGGWGDERDRNLCLNFSRIRSNASGNDVYQIICLLKLGSCTNLLDLYIETVFIELAFSCQEFRCYTRLNPPQSRVLSSLISSDLQSSVGIVKLILRIVLVEPELQYGGGFLSTYSIPILKTPIDAKLHAEFEEAEQAFDYSTSIDFNLSCSTSNVPSSAVSAYLQKMQRGQLIQPFGCMIAIDEEKFSVLAYSENAPEMLDLAPLAVPSMEQQDALTFGTDVRTLFQTSGVAALQKASKIREVNLLNPILLHCKTSGKPFYSILHRIDVGLVIDLEPVDPADVPVTAAGALKSYKLAAKAISKLQSLPSRNISLLCDVLVKEVSDLTGYDRVMVYKFHEDEHGEVVAESHRSDMEPYLGLHYPATDIPQASRFLFMKNKVRMICDCSASPVKVIQDNHLAQPLSLCGSVLRSPHGCHGQYMANMGTVASLVMSVTIEEDGNGMESDQQKGRKLWGLVVCHHRSPRFISFPLRYACEFLILVFGIQINKEVELAAQLREKHILQTQAVLCDMLLRDVPVGIVIQSPNIMDLVKCDGAALYYKKKFWLLGITPTEAQIRDIADWLLQNHGGSTGLSTDSLAEAGYPGASGLGNEVCGVATIKITAKDFLFWFRSHMAKEIKWGGAKHDPNDKDDFQKMHPRSSFKAFLEVVKQRSSPWEDVEMDAIHSLQLLMRGSLQDEIEEDSKMIVNIPLADDRMQSLDELRVVTNEMVHLIETAAVPILGVDSLGIINGWNNKASELTELPVQQAINKLFVDVVADESVEVVKNMLSLASQGKEERNVEIKLRTHGPKQRNGSVILVVNVCCSRDAKGNIVGSCFVGQDVTGQRLIMDQYTRLQGDYVGIIHSPSTLIPPIFMTDEHGRCTEWNDAMQKLSGMKREEAVEKMLVGEVFTLDSVGCRGKDQDTLTKLKILFNRVVTNQNVDKLLFGFFDRQSNYVEALLSADRRIDAEGRITRVLCFLHVASPELKYAIHMQKISEQAADDSVKKLTYFRWEIKKPLSGIKFMQNLMDSSDLSADQKQLLRISTSCQDQLTKIVDGTDTENLEECFMEVNSLEFNVADVLEVVMNQVMILGQERQIQVILDSPLDASSLNLYGDKLRLQQVLSDFMSSAVLFVPESEGSSVSLEVIAKKNHIGSKICIVHLEFSQVVKIQIIWRSSAVEHVTSWPGCSSRIDLNKVDDRDPECRDKQQTDPIKRQKMDCKFALFSSKIWKTDSDFPCEFVVLMEKVTF 1605
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 1219131 1228251 - BLOR09870 Blo02g00140 56370
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00140 1605 ProSiteProfiles PAC domain profile. 1154 1210 IPR000700 -
Blo02g00140 1605 ProSiteProfiles Histidine kinase domain profile. 1365 1502 IPR005467 -
Blo02g00140 1605 Gene3D - 668 1027 IPR029016 -
Blo02g00140 1605 SUPERFAMILY PYP-like sensor domain (PAS domain) 1197 1333 IPR035965 -
Blo02g00140 1605 Pfam N-acetylglucosaminyltransferase II (MGAT2) 61 389 IPR007754 GO:0005795|GO:0008455|GO:0009312|GO:0016021
Blo02g00140 1605 Gene3D PAS domain 544 790 - -
Blo02g00140 1605 CDD HisKA 1369 1412 IPR003661 GO:0000155|GO:0007165
Blo02g00140 1605 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 73 334 IPR029044 -
Blo02g00140 1605 SUPERFAMILY PYP-like sensor domain (PAS domain) 1070 1194 IPR035965 -
Blo02g00140 1605 ProSiteProfiles PAS repeat profile. 1223 1266 IPR000014 -
Blo02g00140 1605 SUPERFAMILY PYP-like sensor domain (PAS domain) 543 656 IPR035965 -
Blo02g00140 1605 ProSiteProfiles Phytochrome chromophore attachment site domain profile. 687 856 IPR016132 -
Blo02g00140 1605 MobiDBLite consensus disorder prediction 150 171 - -
Blo02g00140 1605 SUPERFAMILY Nucleotide-diphospho-sugar transferases 72 393 IPR029044 -
Blo02g00140 1605 SMART pas_2 1213 1282 IPR000014 -
Blo02g00140 1605 SMART pas_2 1083 1149 IPR000014 -
Blo02g00140 1605 ProSitePatterns Phytochrome chromophore attachment site signature. 787 796 IPR013516 -
Blo02g00140 1605 SUPERFAMILY GAF domain-like 874 1054 - -
Blo02g00140 1605 ProSiteProfiles PAS repeat profile. 1081 1151 IPR000014 -
Blo02g00140 1605 SUPERFAMILY PYP-like sensor domain (PAS domain) 1228 1274 IPR035965 -
Blo02g00140 1605 Pfam Phytochrome region 879 1053 IPR013515 GO:0006355|GO:0009584
Blo02g00140 1605 Pfam PAS fold 1084 1198 IPR013767 GO:0006355
Blo02g00140 1605 Pfam PAS fold 1214 1336 IPR013767 GO:0006355
Blo02g00140 1605 Gene3D PAS domain 1227 1339 - -
Blo02g00140 1605 Gene3D - 871 1044 IPR043150 -
Blo02g00140 1605 PANTHER PHYTOCHROME C 496 1521 - -
Blo02g00140 1605 CDD PAS 1092 1198 IPR000014 -
Blo02g00140 1605 SMART gaf_1 687 876 IPR003018 GO:0005515
Blo02g00140 1605 Pfam GAF domain 688 866 IPR003018 GO:0005515
Blo02g00140 1605 SUPERFAMILY GAF domain-like 667 863 - -
Blo02g00140 1605 PANTHER TWO-COMPONENT HISTIDINE KINASE 496 1521 - -
Blo02g00140 1605 PRINTS Phytochrome signature 702 721 IPR001294 GO:0006355|GO:0009584
Blo02g00140 1605 PRINTS Phytochrome signature 602 624 IPR001294 GO:0006355|GO:0009584
Blo02g00140 1605 PRINTS Phytochrome signature 981 1000 IPR001294 GO:0006355|GO:0009584
Blo02g00140 1605 PRINTS Phytochrome signature 1103 1118 IPR001294 GO:0006355|GO:0009584
Blo02g00140 1605 PRINTS Phytochrome signature 787 808 IPR001294 GO:0006355|GO:0009584
Blo02g00140 1605 PRINTS Phytochrome signature 1196 1216 IPR001294 GO:0006355|GO:0009584
Blo02g00140 1605 PRINTS Phytochrome signature 896 916 IPR001294 GO:0006355|GO:0009584
Blo02g00140 1605 PRINTS Phytochrome signature 1014 1032 IPR001294 GO:0006355|GO:0009584
Blo02g00140 1605 PRINTS Phytochrome signature 1084 1100 IPR001294 GO:0006355|GO:0009584
Blo02g00140 1605 PRINTS Phytochrome signature 1176 1193 IPR001294 GO:0006355|GO:0009584
Blo02g00140 1605 CDD PAS 1225 1336 IPR000014 -
Blo02g00140 1605 Gene3D PAS domain 1069 1212 - -
Blo02g00140 1605 Pfam PAS fold 538 654 IPR013654 GO:0006355
Blo02g00140 1605 Gene3D - 1396 1526 IPR036890 -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Blo02g00140 Blo15g00444 BCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00140 Blo-Chr2:1219131 Blo05g00255 Blo-Chr5:2832620 5.00E-07 dispersed
Blo01g00030 Blo-Chr1:401409 Blo02g00140 Blo-Chr2:1219131 0 transposed
Blo01g00879 Blo-Chr1:17349254 Blo02g00140 Blo-Chr2:1219131 0 transposed
Blo07g00144 Blo-Chr7:1906954 Blo02g00140 Blo-Chr2:1219131 0 transposed
Blo15g00443 Blo-Chr15:6505500 Blo02g00140 Blo-Chr2:1219131 0 transposed
Blo15g00444 Blo-Chr15:6508401 Blo02g00140 Blo-Chr2:1219131 9.49E-171 transposed
Blo18g00692 Blo-Chr18:15174709 Blo02g00140 Blo-Chr2:1219131 0 transposed
Blo15g00442 Blo-Chr15:6502087 Blo02g00140 Blo-Chr2:1219131 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00140 - - qsu:111989287 1610.12