Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo02g00141 | ATGGCGGACTCGGATAACGAATCGGGAGGGCCTACCAGCAACGCTAATAGCGAGCACTCGAGGGAGCAAGACAGGTTCTTACCCATAGCCAACGTGAGCAGAATAATGAAGAAAGCTCTGCCAGCAAACGCCAAGATCTCGAAAGACGCAAAAGAAACAGTGCAAGAATGTGTTTCGGAGTTCATCAGCTTCATAACCGGCGAGGCCTCCGACAAGTGTCAGAGAGAAAAAAGGAAGACGATCAACGGCGACGATTTGTTGTGGGCCATGACTACTTTAGGATTCGAACAGTACGTGGAGCCTCTGAAAGTGTATCTACAGAAGTACAGAGAAACAGAAGGAGAGAAGAGCTCAGTCGGAAGACAAGGTGAAAAAGAGGGCGGCGGAGGTGGGTCCAGCTCGGGCGGGATTGATGCTGCCGGATCTGAAAGTGGAGGTGGCTTTAATGTAATGGGGGCGATGTACGGTGGGATGACGATGATGGGTCATCATCAGTCCCACGTGTACGGTCCAGGTGGATATCATCATATGGGTGGTGGTAGTCAAAAGGGCGGAACCGGCGGTCAGGGCTCCGGCAACCGGTGA | 585 | 52.48 | MADSDNESGGPTSNANSEHSREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEQYVEPLKVYLQKYRETEGEKSSVGRQGEKEGGGGGSSSGGIDAAGSESGGGFNVMGAMYGGMTMMGHHQSHVYGPGGYHHMGGGSQKGGTGGQGSGNR | 194 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 1233511 | 1234095 | + | BLOR09871 | Blo02g00141 | 56371 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo02g00141 | 194 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Blo02g00141 | 194 | PRINTS | CCAAT-binding transcription factor subunit A signature | 54 | 72 | - | - | |
Blo02g00141 | 194 | PRINTS | CCAAT-binding transcription factor subunit A signature | 73 | 91 | - | - | |
Blo02g00141 | 194 | PRINTS | CCAAT-binding transcription factor subunit A signature | 92 | 110 | - | - | |
Blo02g00141 | 194 | PANTHER | CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED | 1 | 172 | IPR027113 | GO:0001228|GO:0006355|GO:0016602 | |
Blo02g00141 | 194 | MobiDBLite | consensus disorder prediction | 172 | 194 | - | - | |
Blo02g00141 | 194 | Pfam | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 26 | 90 | IPR003958 | - | |
Blo02g00141 | 194 | PANTHER | NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-3 | 1 | 172 | - | - | |
Blo02g00141 | 194 | Gene3D | Histone, subunit A | 13 | 136 | IPR009072 | GO:0046982 | |
Blo02g00141 | 194 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
Blo02g00141 | 194 | ProSitePatterns | NF-YB/HAP3 subunit signature. | 57 | 73 | IPR003956 | GO:0005634|GO:0006355|GO:0043565 | |
Blo02g00141 | 194 | MobiDBLite | consensus disorder prediction | 112 | 141 | - | - | |
Blo02g00141 | 194 | SUPERFAMILY | Histone-fold | 23 | 125 | IPR009072 | GO:0046982 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo02g00141 | Blo-Chr2:1233511 | Blo10g00864 | Blo-Chr10:27339437 | 5.65E-78 | dispersed | |
Blo03g00464 | Blo-Chr3:15511121 | Blo02g00141 | Blo-Chr2:1233511 | 2.18E-67 | transposed | |
Blo04g00929 | Blo-Chr4:10990813 | Blo02g00141 | Blo-Chr2:1233511 | 3.61E-58 | transposed | |
Blo05g00317 | Blo-Chr5:3591375 | Blo02g00141 | Blo-Chr2:1233511 | 8.80E-47 | transposed | |
Blo15g00440 | Blo-Chr15:6493752 | Blo02g00141 | Blo-Chr2:1233511 | 2.25E-110 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
11979 | PF00808 | CBFD_NFYB_HMF | 1.80E-27 | CL0012 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo02g00141 | K08065 | - | csv:101219076 | 251.906 |