Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00170 ATGTGTTTTGATGTCCTCTTTCGTCAACTCATTGATCAGTTGCCGGAAAATATGGGTATTCAGATGGGATCATTAGATGAAAGATCTAACTCTTACTTCGAAGATGAGAGCCTTGTTAGCCCTGCATCAGTAGCCACAAAAAAACATTCATTTCAGGAGTCTTTACGCATATCTTCATCAACTGGTAATCGGAGGACTTGGTTTTCTCCAGACATGGGGTGGTTTAGGGTGATTGACAGCATCAAAATCGTCGTCTTCTCCGCAAAAATCAACATCCTCGTGCCTTTTGGGCCTCTGGCAATCTTGGTTCATAACCTATCTGGCCATCACGGATGGGTCTTTCTCTTGAGCTTATTGGGGATTATCCCTCTGGCAGAGAGACTGGGCTATGCAACTGAGCAGCTGGCTTGCTACACTGGACCCACAGTTGGAGGTCTTCTCAATGCTACTTTTGGAAATGCAACGGAATTGATAATATCCATTTACGCATTGAAGAGGGGGATGATACGAGTCGTTCAACAGTCGTTACTCGGCTCTATTTTGTCAAACATGTTATTAGTGCTTGGATGTGCATTCTTTGCCGGTGGACTCGTGTGTTCTGCTCGAGAACAGGTTTTCTCTAAGTCATCTGCAACTGTGAACTCCGGATTGTTGCTAATGGCGGTCATGGGTCTTCTATTTCCAGCAGTTCTTCACTCCACTCATACTGAATTGCATTTTGGAAAGTCTGAGTTGGCTCTCTCGAGGTTTAGCAGCTGTATTATGCTGGTTGCATATGCTGCATATCTTTTTTTTCAGTTGAGAAGCGATAAAAATCAGTACATCTCAGTCGACGAGGTTGAGGTTCAGGCTGAAGAGAGCCCAGATGATGATGAAGAGGCACCTGAGATCTCTAAATGGGAGTCCATAATTTGGTTGACTGTTCTGACATCATGTATTTCAGTCCTCTCAGAATATCTAGTAAATGCCATAGAGGGAGCATCAGAGGCAATGGAAATACCAGTGGCATTCATTAGTGTGATCCTGCTCCCGATCGTGGGTAACGCTGCCGAGCACGCAGGTGCTGTAATGTTTGCCATGAAAGACAAGCTCGACATATCTTTGGGAGTTGCTATCGGATCATCAACTCAGATATCGATGTTTGGGATTCCGTTTTGTGTCGTCGTTGGTTGGATCATGGGACGTCCGATGGATCTAAATTTTCAACTCTTCGAGACAGCCACGCTTCTCATGACTGTTATAGTTGTAGCCTTTATGCTTCAGATCCTTCTTCAGTTGGTTAGTCTTCTCTTCCTAACTTTTCCGGCCATTAAAGTTTTGAGACCATATCGACTTTGCTTATACGCCTGCACCCGATTAACCGTGATTTGCAGCCGATAA 1380 44.49 MCFDVLFRQLIDQLPENMGIQMGSLDERSNSYFEDESLVSPASVATKKHSFQESLRISSSTGNRRTWFSPDMGWFRVIDSIKIVVFSAKINILVPFGPLAILVHNLSGHHGWVFLLSLLGIIPLAERLGYATEQLACYTGPTVGGLLNATFGNATELIISIYALKRGMIRVVQQSLLGSILSNMLLVLGCAFFAGGLVCSAREQVFSKSSATVNSGLLLMAVMGLLFPAVLHSTHTELHFGKSELALSRFSSCIMLVAYAAYLFFQLRSDKNQYISVDEVEVQAEESPDDDEEAPEISKWESIIWLTVLTSCISVLSEYLVNAIEGASEAMEIPVAFISVILLPIVGNAAEHAGAVMFAMKDKLDISLGVAIGSSTQISMFGIPFCVVVGWIMGRPMDLNFQLFETATLLMTVIVVAFMLQILLQLVSLLFLTFPAIKVLRPYRLCLYACTRLTVICSR 459
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1478787 1483415 - BLOR09900 Blo02g00170 56400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00170 459 Pfam Sodium/calcium exchanger protein 112 267 IPR004837 GO:0016021|GO:0055085
Blo02g00170 459 Pfam Sodium/calcium exchanger protein 303 422 IPR004837 GO:0016021|GO:0055085
Blo02g00170 459 Gene3D - 290 439 IPR044880 -
Blo02g00170 459 Gene3D - 141 280 IPR044880 -
Blo02g00170 459 PANTHER VACUOLAR CATION/PROTON EXCHANGER 14 421 - -
Blo02g00170 459 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 14 421 IPR004713 GO:0006812|GO:0008324|GO:0016021
Blo02g00170 459 TIGRFAM cax: calcium/proton exchanger 93 418 IPR004798 GO:0006816|GO:0015369
Blo02g00170 459 TIGRFAM caca2: calcium/proton exchanger 80 421 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo02g00170 Blo15g00404 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00170 Blo-Chr2:1478787 Blo05g00015 Blo-Chr5:147481 0 dispersed
Blo03g01561 Blo-Chr3:43388754 Blo02g00170 Blo-Chr2:1478787 1.53E-07 transposed
Blo15g00403 Blo-Chr15:5754119 Blo02g00170 Blo-Chr2:1478787 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00170 K07300 - csv:101215915 602.823