Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00186 ATGGGGAAGAAAGAAGGTAGCTCCTGGTTGACTGCTGTGAAAAGGGCTTTTAGATCTCCTTCAAAAGATGACGAAGAAAAGAAGAGGGAGAAGCGGAGGTGGATTTTCAGAAGACAACAGTCCAATCCACAGGAAATCAAGGTGACCCAAGTGCAAAATCCATTAAAGCCAGCGACTGAAGAGCAGAAGCGTGGCGTCACCGACGTGGTTCGGCTGAACAAGCCCTGTCATGGCGCTAGAGAGCACTACTACGCCATTTTGATACAAACTTCCTTCAGAGGATACCTGGCCAGGAGAGCTCTGCGAGCGCTGAAAGGGCTGGTGAAACTGCAGGCGCTGGTGAGGGGTCACAATGTGAGAAAGCAAGCGAAAATGACCCTTAAATGCATGCAAGCGCTCGTTAGAGTCCAAGCCAGAGTGATAGATCAGCGAATCAAGCTCACCCACGAAACCTCCAATGTCAAATCTGCCATCTGCAACATAAACAGTGCCATAGAATCTCGCTATCTTCGAGACATTTCAGACAGAAAATCCATGTCTCAGTCAAGAGAGGGAAGTAGAAGTAGAATACCTGATCATTTGGATGAACGTTCTCACACAATCGAAGAAGTTAAAGCAATGCTGCAACAGAGGAGAGATCAAATCGCCATTAACCGCGATCGATCCTTGTCACAAGCTTTTTCTCAGCAGATTATGAGAGCTTCGAGGAATCCATCAATGGGAAGCGAATGTGAGCTAGACGACAGACCAAAGTGGCAAGATCAATTAATGAGAAGGAAGCCATGGGAGAGCAGGGGAAGAGCTTCAACTGATCAGAGAGCTGATTCCATCAAAACAGTCGAAATCGACACTTCTCTTCCGTACACATACTTGGCGCCTAATTTCCAAAGAGCACCACAAAATCAGCACAATCTTCAACAAAGACCTAATCCCCACTCTGTTTCTTCTCCAGTCCACCACAGATCCTACAAAAACTTATCCCCCCACAATAATTCCTCTTTCACTCCATCTCCGTCCAAAACCAGACCTCTACTCGTCCGATCTGCCAGCCCTCGCTGCATCAGAGAAGAAAAACACTTCCCAACCTCCCAAACACCAAGCCTCAAGTCAAATTATTACTACAGCACCATTAATTTGCAGAATCAAAGCAGAGGAGGAGGAAGTAGTACGACTGTAAACAACTTGGGAGCTTCGTTTCCGAACTACATGGCAGCGACAGAATCAGCGAAGGCGCGAGTGCGTTCTCAGAGCGCCCCGAAGCAAAGACCGTCAAGACCGTCGACACCGGAGAGGGAAAGAAGCGGATCAGCAAGGAAGCGCCTTAATTTTCCAGCTGTCGAAGGGTACGGAGGTTTGGGGCAGAACCTGAAGGGCCCCTGCTTCAAGAGCGTGAATGAGGAGCATGTGGGGTTAGAGCAGCAGTCCAATTACTCTTCTTGCTGCACGGACAGCTTTGGCTGTGAGATTTCTCCTTCTTCCACGAGTGATCTGAGAAGGTGGCTGAGGTGA 1509 48.44 MGKKEGSSWLTAVKRAFRSPSKDDEEKKREKRRWIFRRQQSNPQEIKVTQVQNPLKPATEEQKRGVTDVVRLNKPCHGAREHYYAILIQTSFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLKCMQALVRVQARVIDQRIKLTHETSNVKSAICNINSAIESRYLRDISDRKSMSQSREGSRSRIPDHLDERSHTIEEVKAMLQQRRDQIAINRDRSLSQAFSQQIMRASRNPSMGSECELDDRPKWQDQLMRRKPWESRGRASTDQRADSIKTVEIDTSLPYTYLAPNFQRAPQNQHNLQQRPNPHSVSSPVHHRSYKNLSPHNNSSFTPSPSKTRPLLVRSASPRCIREEKHFPTSQTPSLKSNYYYSTINLQNQSRGGGSSTTVNNLGASFPNYMAATESAKARVRSQSAPKQRPSRPSTPERERSGSARKRLNFPAVEGYGGLGQNLKGPCFKSVNEEHVGLEQQSNYSSCCTDSFGCEISPSSTSDLRRWLR 502
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1680055 1681980 + BLOR09916 Blo02g00186 56416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00186 502 MobiDBLite consensus disorder prediction 301 344 - -
Blo02g00186 502 PANTHER PROTEIN IQ-DOMAIN 1-LIKE ISOFORM X1 1 502 - -
Blo02g00186 502 ProSiteProfiles IQ motif profile. 105 132 IPR000048 GO:0005515
Blo02g00186 502 MobiDBLite consensus disorder prediction 406 444 - -
Blo02g00186 502 Gene3D - 79 140 - -
Blo02g00186 502 PANTHER IQ-DOMAIN 5-RELATED 1 502 - -
Blo02g00186 502 MobiDBLite consensus disorder prediction 242 278 - -
Blo02g00186 502 MobiDBLite consensus disorder prediction 175 198 - -
Blo02g00186 502 ProSiteProfiles IQ motif profile. 81 109 IPR000048 GO:0005515
Blo02g00186 502 MobiDBLite consensus disorder prediction 233 278 - -
Blo02g00186 502 Pfam IQ calmodulin-binding motif 108 124 IPR000048 GO:0005515
Blo02g00186 502 Pfam IQ calmodulin-binding motif 85 102 IPR000048 GO:0005515
Blo02g00186 502 MobiDBLite consensus disorder prediction 410 424 - -
Blo02g00186 502 MobiDBLite consensus disorder prediction 301 346 - -
Blo02g00186 502 MobiDBLite consensus disorder prediction 1 41 - -
Blo02g00186 502 MobiDBLite consensus disorder prediction 17 38 - -
Blo02g00186 502 Pfam Protein of unknown function (DUF4005) 350 451 IPR025064 -
Blo02g00186 502 SMART iq_5 80 102 IPR000048 GO:0005515
Blo02g00186 502 SMART iq_5 103 124 IPR000048 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00186 Blo-Chr2:1680055 Blo09g00004 Blo-Chr9:48272 1.65E-76 dispersed
Blo15g00158 Blo-Chr15:1622332 Blo02g00186 Blo-Chr2:1680055 4.93E-21 dispersed
Blo02g00186 Blo-Chr2:1680055 Blo01g01460 Blo-Chr1:53769300 3.36E-22 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00186 - - qsu:112008332 568.54