Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00196 ATGTGGAACGTGGAAATAGAAAAAGAGAGAACGAAAGAGCCTTACTTCCCTTATCCTCCGTCTCCTAAACCCCGACCGCCATTGAAGTACAGAGCAAGAAACCCTCCCTTTTCTTCTCCATTGAAGCGCTTACACTCCATGGCCAGAAAGAAAAAACAAAGAAATCATCCTCCTCCCCCTCCTCCTGTTCCTTTGCATCCTATTCTGAATCTTCTTCCTCCTGCTATTCAATCTTCTGTTTCCGTCCTGTCTCGACAAGACAGGGAGGTTTTAGCCTACATGATTACCATCTTCATGTGCTTCCCCTGTTACGGAACTTATTGGGAGAGATGGACCTCAACGTCCTCCTCCAACCGCCGTCGCATCGACCAAGCCATTGAAGCTTTCGAGAACTCCCTAGCTATCTGGGAGAACGACAACGCCAACTCAACGAAAAACACTGCAAATTCCAGAAGGAAAGATAAAAGTTGCTCACACGTTTCTTTACCGGCGATAGAGGAAGAAGTGGAGGAAGGAATCGATAAAGAAGAGAAAGAAGAGCCAGTGGAGAAGACGACGCCGGAACCGGAGAAGCAAGATTTTGTGATTGACTTGTCGGCGGTGAGGGAAACTAACCAGAGCTTCGCCGGAAATGTAATACCGAACTTGTTGGGTTTCTTCAATTCTCGCATCTGGAGCCTGTGGAATCCAAAGTTGTTAGGGTGGATGCATAGAAAGTTTAAGCAGAATAGCAGTGAACCCTTCAAGGATTTTGTAATTGGGCAAGCGTCAGCTGATGATCAGCAATTCTACACAAAGCAAAGCTTCAAACCATTCAAACATGGCCAGAAAGATGAGTATCTGAGGAAATCTTTCACCACTCTTGAGGCAGCGAGAGTAGAAGAAGAGTACGAAGAAGAAGCTTCGTATCCCATCTCCGATCTCTTCCATGGCTTCCTCGCTATCGGAACCCTAGGCTCCGACCAACTCATCGCCGATCCCGCCACCCCTAAGTTCTCCATCTCCATCGAAAATGTCACCGAGAAAGAAACCGAAGTTACAGAAGACGAATTGAAGCTCATCAATGAGGAACTCGAGAAGGTTTTAGCCGCAGATTCGAAGGAAGAAGAAAAGGAATCCTCCAGAAGAAACAGCTATGCGAGCTTGGGGAGGAGCAGCCATGGGAGCACAATTACTCTCAGCGGGAAGCCGATTGAAGTAATCTCGGAAAGCAATATCAATGGCGTTTGTCCTCTGCAGGAGTATCTTTTTGGATCGGCCATTGAAATGTCGGAGACGACGACTGCAGTGGCGAAGAAGGAGCACCGGACGTCGCTGGGAGAGCTGTTCCAGAAGAGTAAAATGACGGAGGAGAATTGTGGAGGGAAATGCGAGAAGGAAGATAAAGGGGTGGATAAGTCTGCAACATATTTCATGAAGAAGAAGCTGAAGAAAAAGATGCTTCAGTCTTCTTCTCGAAGCTCCATCGTTGCTGATGCTGAATCTGTTTCTCCTGAAACCAAACTCCATAAGATTCTGCACATGTTTCACAGGAAAGTGTACCCAGAAAACTACATAGCTGCCAAACAACAGAAGGGAGAGAAGGTGCAGAAGAACAACGAGAAGAAGAAGAAATCAACGGTGAATGATGGAGATCAATCCACCAACTCCGATGAAGACATCATGATTTATCCCCAGAGGCCCACTCCCAAGCGTTACTTCAATCACCACCGTCCATCTTCCTTCTCTTTAAGCTTCGCTGATTTCCACGACAACAAAGAGCAGTGGATTAAAACCGACGCTGATTGTAAGCTCTCTCGACCTTGTGTTGGAGCTTTGAAGACGACGACGAAGAAAGAAGCAGCTATGGCTGTGCAATACAACGCCGTTATGTGCTTGTTATTTATTAATGGCCGGTGGCTAGCTATGGCTCTTCCTATTGGGAAGCTCACCATTCTAGTTGGTGCAGGTATTATTGGGTCGGTTCTTGCAAAAGAAGGCCGTATTTCAAATGTTTCTGACTATGTATCGGGTGCTTTTAAGATAGTTTTGAGGCAACTTAAAAGAGATGACTCTACTCCATCAGTTAGCAAGCCGCGCAATGACACTTTAATGGCTCAGCTTGCGACAGGAGCTGCAGATTCTAGCATCAAGTCAACCAATTATGATTGTGACCACGAGTGGAACAGGTGCTCGGAGATATGGTGTAGTAGTGGTTGTATTGGTAGCAGGATATGGCTATGCCTGGTGGAAGGCAAGATCTTTTACCCTCAAGAAATTTCAATGATTGAAATTATCTCTCTAGCATTTTCTGGTTATCTGAAAAATGAAAGTCATTCTGTTTCTACTGACACAGATCTATCTCTACAGGTTTCAGACCTACGAGGAAAAACAGATAATGTGGGCAATGATATTAGATCTGTTCATGATGCAGTCCGAACCCTGGAAACTAAAATTTGGAGAATTGAAGAGAAACAGGATCGAACAAATGTAGGAGTGTGGAAGTTGTGTGATTATGCGTGGAGTTTAGAAAATAGCAGAACCACTGAGCGTATTCAGGCATCACCATCAAGTTCTACCAGACCAGCTATTGATACTTCAAAGGAAACACCGTCGAGTTCCTCCAGGCTAGCTCTTGAACAACAACCTGTTACACCGTCAAGGGCTGGTTCTTTGCTTCCTGTTTTTTCTTCTGAACCAATGTTTCCAGAGTCGAATGAATCTTCCCAGGCACAGCGGCATCTCCACACGGCCGTCTCAGCATCAGGCTTGCAGCATATTCATGGACTTTCTGAACTGCGCCATGAATCAAACGTATCCAAAAATGATGGAGCTTCAAGTTCTGGTCTATTTGGACTGAGATTTCCATCCATTAATGCCCCCTTTTTCCCTACCAAGTTTCAAGCTTTCATTAGCTATCACAAGGTTTCATGGGTTCAGGCTTTCATTAGCCATCTCAAAATAACTACCAAGTTTCAAGCTTTCATTAGCTATCACAAGGTTTCATGCGTTCAGGCTTACATTAGCCATCTCAGGAATATCGTTACCGTCGAAAACCTTAAATGGGTCGAAGACGAATTTGGGTTGGATCGGGTCGAAAGTGGATCGGTTCGGGTTGGGTCGAAACTGGGTTGGTTCGGTTCGGGTCAGATCAAGCTGGGTCGGTTTGGGTCGGATCGGATCGGTTCGGGTCGGGTTGAGTCACTTGAACTGGACCGGTTCGGGCAGACTTCTTTAAACACCTGA 3225 45.71 MWNVEIEKERTKEPYFPYPPSPKPRPPLKYRARNPPFSSPLKRLHSMARKKKQRNHPPPPPPVPLHPILNLLPPAIQSSVSVLSRQDREVLAYMITIFMCFPCYGTYWERWTSTSSSNRRRIDQAIEAFENSLAIWENDNANSTKNTANSRRKDKSCSHVSLPAIEEEVEEGIDKEEKEEPVEKTTPEPEKQDFVIDLSAVRETNQSFAGNVIPNLLGFFNSRIWSLWNPKLLGWMHRKFKQNSSEPFKDFVIGQASADDQQFYTKQSFKPFKHGQKDEYLRKSFTTLEAARVEEEYEEEASYPISDLFHGFLAIGTLGSDQLIADPATPKFSISIENVTEKETEVTEDELKLINEELEKVLAADSKEEEKESSRRNSYASLGRSSHGSTITLSGKPIEVISESNINGVCPLQEYLFGSAIEMSETTTAVAKKEHRTSLGELFQKSKMTEENCGGKCEKEDKGVDKSATYFMKKKLKKKMLQSSSRSSIVADAESVSPETKLHKILHMFHRKVYPENYIAAKQQKGEKVQKNNEKKKKSTVNDGDQSTNSDEDIMIYPQRPTPKRYFNHHRPSSFSLSFADFHDNKEQWIKTDADCKLSRPCVGALKTTTKKEAAMAVQYNAVMCLLFINGRWLAMALPIGKLTILVGAGIIGSVLAKEGRISNVSDYVSGAFKIVLRQLKRDDSTPSVSKPRNDTLMAQLATGAADSSIKSTNYDCDHEWNRCSEIWCSSGCIGSRIWLCLVEGKIFYPQEISMIEIISLAFSGYLKNESHSVSTDTDLSLQVSDLRGKTDNVGNDIRSVHDAVRTLETKIWRIEEKQDRTNVGVWKLCDYAWSLENSRTTERIQASPSSSTRPAIDTSKETPSSSSRLALEQQPVTPSRAGSLLPVFSSEPMFPESNESSQAQRHLHTAVSASGLQHIHGLSELRHESNVSKNDGASSSGLFGLRFPSINAPFFPTKFQAFISYHKVSWVQAFISHLKITTKFQAFISYHKVSCVQAYISHLRNIVTVENLKWVEDEFGLDRVESGSVRVGSKLGWFGSGQIKLGRFGSDRIGSGRVESLELDRFGQTSLNT 1074
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1775380 1791251 - BLOR09926 Blo02g00196 56426

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00196 1074 MobiDBLite consensus disorder prediction 364 389 - -
Blo02g00196 1074 MobiDBLite consensus disorder prediction 15 33 - -
Blo02g00196 1074 MobiDBLite consensus disorder prediction 168 190 - -
Blo02g00196 1074 MobiDBLite consensus disorder prediction 13 64 - -
Blo02g00196 1074 Coils Coil 126 146 - -
Blo02g00196 1074 PANTHER PROTEIN LAZY 1 231 596 IPR038928 GO:0009630|GO:2000012
Blo02g00196 1074 MobiDBLite consensus disorder prediction 841 883 - -
Blo02g00196 1074 MobiDBLite consensus disorder prediction 523 555 - -
Blo02g00196 1074 MobiDBLite consensus disorder prediction 527 542 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00196 - - - csv:105435773 385.956
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g00169 Blo-Chr1:2353156 Blo02g00196 Blo-Chr2:1775380 3.66E-92 dispersed
Blo02g00196 Blo-Chr2:1775380 Blo12g00280 Blo-Chr12:16805633 1.10E-90 dispersed
Blo03g00279 Blo-Chr3:5671629 Blo02g00196 Blo-Chr2:1775380 7.68E-27 transposed
Blo02g00196 Blo-Chr2:1775380 Blo07g00015 Blo-Chr7:309606 1.72E-19 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1274 . . . . . . . . . . . . . . . . . . . . . . . . Cla06g00192 Cam06g0018 Cec06g0212 Cco06g0207 Clacu06g0210 Cmu06g0203 Cre06g0976 . . . . . . Chy11g01797 Cme11g02328 Blo02g00196 . . . Bpe14g00798 . . . Sed07g0096 . . . . . . Cpe17g01066 . Bhi12g02442 Tan06g1508 . . Hepe03g1123 . . . . . . . . . Lsi09g01732 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001778 3 3 3 3 3 2 3 2 2 1 2 2 3 2 2 3 2 2 3 2 2 1 2 2 2 2 2 5 2 1 69
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo02g00196 Blo_Chr02 FPKM 24.601954 29.509563 19.201416 20.748386 20.551567 20.381001 25.095625 12.986657 13.756827 14.621913