Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00197 ATGGCGACCCTTTCCTCCTCCAATTGTGCTTATTCGTATTCGCCTTTATCATCATCATCATCGTCTTCTTCTTCTTCTTCTTCTTCTTCGTCGTCGTCGTCTGTAGCCCCTTTCCTTCACAGGCGTTTACTCAGACCTAAGCTTTCTTTGAAGCATAAAGGAGTCCCTTATCAGAATGTGGTCAGAATGCAAGATGGTGCTGTTACATCTGCAGTTACCTCCATTGAAAAGGAATCTCCTTTCAATAAACTAAAAAATGAGCTGCTCTCAATTCCATCCTCCGATGAATCTAAAGCTACTCTGAGCTCTAATATCAGTGAAAATGAACCTACTGTCAGTATTACAGTAGTTGGAGCTTCAGGTGATCTTGCCAAAAAGAAGATATTTCCAGCACTGTTTGCTCTATATTATGAGGATTGTCTCCCCAAGCATTTTACCATCTATGGTTATGCTAGAAGTAAGATGAGTGATGCAGAACTCAGAAACATGGTCAGCAAGACCTTAACCTGCAGAATCGATAAGAGGGAGAATTGCAGTGAAAAAATGGATCAGTTTCTCCAAAGATGTTTCTACCATTCTGGTCAGTATGATTCTCAAGAGAACTTTGAAGAACTAGACAAGAAGCTGAAGGAACATGAGGGTGGGAGAGTCTCTAATCGTCTTTTCTATCTATCGATTCCTCCTAACATATTCATTGATGCCGTGAGATGCTCTAGCTTGTCTACTTCGTCCAGTAATGGGTGGACCCGAGTCATTGTCGAGAAACCATTTGGACGGGATTCAGAATCTTCTGCTTCTTTAACCAAATCCCTCAAACAGTACCTTGATGAGGATCAAATTTTCCGGATAGATCACTATCTAGGAAAGGAACTAGTTGAGAATCTCTCCGTTCTGCGCTTCTCAAACCTTATTTTCGAACCGTTATGGTCAAGGCAGTATATAAGGAATGTTCAGCTAATATTTTCGGAAGATTTTGGCACGGAAGGACGCGGAGGGTATTTTGACAATTATGGCATAATTAGAGATATAATGCAGAACCATCTTCTTCAAATTTTAGCTCTTTTTGCGATGGAAACTCCAGTTAGCTTGGATGCAGAAGATATAAGAAATGAAAAGGTGAAAGTTTTACGATCAATGAGGCCGTTACAGCTGGATGACGTGGCTATCGGACAGTACAAGAGCCACACGAAGGGGGGAGTTACTTACCCTGCCTACACTGACGATAAAACTGTACCGAAAGATAGCTTAACTCCGACATTTGCAGCGGCCACTCTTTTCATCGACAATGCTAGATGGGATGGAGTGCCTTTTCTTATGAAGGCTGGCAAAGCACTGCATAATAAGAGAGCGGAGATAAGAGTACAATTCAGGCACGTACCCGGCAATTTATACAACCGAAATTTTGGGACGGACCTTGATAGAGCTACGAACGAGCTTGTCATCCGAGTGCAGCCTGACGAAGCGATATATTTAAAAATCAACAACAAAGTTCCCGGTTTGGGAATGAGACTAGATCGTAGCAATTTAAATCTCCACTACGCCGCGAGGTATTTGAAGGAGATTCCGGATGCTTACGAGAGGCTGTTGTTGGATGCAATCGAAGGGGAAAGAAGATTATTCATTCGAAGCGACGAATTGGATGCTGCGTGGGCGCTCTTCACGCCATTGCTGAAAGAGTTGGAAGAGAAAAAGATAAATCCCGAGTATTATCCGTACGGCAGCCGGGGTCCGGTTGGGGCCCACTATCTGGCTGCGAGATATGATGTCCGGTGGGGAGACCTTGGTCTTGAGCAATAG 1797 43.41 MATLSSSNCAYSYSPLSSSSSSSSSSSSSSSSSSVAPFLHRRLLRPKLSLKHKGVPYQNVVRMQDGAVTSAVTSIEKESPFNKLKNELLSIPSSDESKATLSSNISENEPTVSITVVGASGDLAKKKIFPALFALYYEDCLPKHFTIYGYARSKMSDAELRNMVSKTLTCRIDKRENCSEKMDQFLQRCFYHSGQYDSQENFEELDKKLKEHEGGRVSNRLFYLSIPPNIFIDAVRCSSLSTSSSNGWTRVIVEKPFGRDSESSASLTKSLKQYLDEDQIFRIDHYLGKELVENLSVLRFSNLIFEPLWSRQYIRNVQLIFSEDFGTEGRGGYFDNYGIIRDIMQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRSMRPLQLDDVAIGQYKSHTKGGVTYPAYTDDKTVPKDSLTPTFAAATLFIDNARWDGVPFLMKAGKALHNKRAEIRVQFRHVPGNLYNRNFGTDLDRATNELVIRVQPDEAIYLKINNKVPGLGMRLDRSNLNLHYAARYLKEIPDAYERLLLDAIEGERRLFIRSDELDAAWALFTPLLKELEEKKINPEYYPYGSRGPVGAHYLAARYDVRWGDLGLEQ 598
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1792369 1795430 + BLOR09927 Blo02g00197 56427

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00197 598 Gene3D Dihydrodipicolinate Reductase; domain 2 283 592 - -
Blo02g00197 598 Hamap Glucose-6-phosphate 1-dehydrogenase [zwf]. 111 593 IPR001282 GO:0006006|GO:0016614|GO:0050661
Blo02g00197 598 PRINTS Glucose-6-phosphate dehydrogenase signature 326 343 IPR001282 GO:0006006|GO:0016614|GO:0050661
Blo02g00197 598 PRINTS Glucose-6-phosphate dehydrogenase signature 431 457 IPR001282 GO:0006006|GO:0016614|GO:0050661
Blo02g00197 598 PRINTS Glucose-6-phosphate dehydrogenase signature 250 263 IPR001282 GO:0006006|GO:0016614|GO:0050661
Blo02g00197 598 PRINTS Glucose-6-phosphate dehydrogenase signature 274 302 IPR001282 GO:0006006|GO:0016614|GO:0050661
Blo02g00197 598 PRINTS Glucose-6-phosphate dehydrogenase signature 344 360 IPR001282 GO:0006006|GO:0016614|GO:0050661
Blo02g00197 598 Pfam Glucose-6-phosphate dehydrogenase, NAD binding domain 116 294 IPR022674 GO:0006006|GO:0016614|GO:0050661
Blo02g00197 598 Pfam Glucose-6-phosphate dehydrogenase, C-terminal domain 297 591 IPR022675 GO:0004345|GO:0006006|GO:0050661
Blo02g00197 598 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 284 591 - -
Blo02g00197 598 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE 2, CHLOROPLASTIC 23 598 - -
Blo02g00197 598 TIGRFAM zwf: glucose-6-phosphate dehydrogenase 113 592 IPR001282 GO:0006006|GO:0016614|GO:0050661
Blo02g00197 598 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 109 297 IPR036291 -
Blo02g00197 598 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 23 598 IPR001282 GO:0006006|GO:0016614|GO:0050661
Blo02g00197 598 MobiDBLite consensus disorder prediction 1 34 - -
Blo02g00197 598 ProSitePatterns Glucose-6-phosphate dehydrogenase active site. 284 290 IPR019796 GO:0004345|GO:0006006
Blo02g00197 598 Gene3D - 108 282 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00197 K00036 G6PD, zwf; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] - tcc:18608929 998.038
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00197 Blo-Chr2:1792369 Blo10g00003 Blo-Chr10:21806 3.14E-164 dispersed
Blo02g00197 Blo-Chr2:1792369 Blo13g00437 Blo-Chr13:24603420 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1298 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Blo02g00197 . . . Bpe14g00802 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003812 2 1 1 2 2 1 1 1 1 1 1 1 1 1 1 1 1 4 1 1 1 2 2 1 1 1 1 5 2 2 44
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo02g00197 Blo_Chr02 FPKM 18.194361 19.712389 0.0 0.0 1.318615 1.634565 1.334218 0.0 0.0 0.0