Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00209 ATGTGGTCGACCAGTCCAACTGGCGAGGTTGACCAGACCAGCAATTCTGGTCGATCCGTCTTGCCCCATCCGAGATTGACTGGACTCAAAAAGCAGTCCACCAAGAATGACATTTCCAGCAATAGTAGTACTGTGTGTAAGTGTAAGAGATATACATACACAAAGGTTTTGCAGAAGCTTGAAAAAGTGGATCGAAAGTATGGAAAGAGATCGCTTCCTTGGGAAGCATCGGAGGAGAAAGAGAGAGAGAATGAGTTCCAACCTTACTCTTCCTCTTCTTCTTGGCCTGAAAATGATATGTCTCCAATGGTTGCTGCTCTTTCTCAAGTCATAAGTGCAGGTAATGAGAGGCCAAATTTGGTGCAATCCGCCATTTCTTCTGTCAAAGAGGAGCCTGAACCTTCTCCTACTGCTCAAGATCAAGAGAATAGTCGGAGACGACACTACAGAGGAGTGAGGCAAAGGCCATGGGGAAAATGGGCAGCTGAAATCAGAGACCCGAAGAAAGCAGCTAGAGTTTGGCTGGGCACCTTCGACACAGCCGAGGATGCAGCCCTCGCCTATGATAAAGCAGCTCTCAAGTTCAAAGGCAGCAAAGCAAAGCTTAATTTTCCCGAAAGAGTTCCGCCTGTTTCTGCAGATCATCCCCTTTACCAACCTTCTGCGACTTCTTCTTCGTCTTCTTCTGCCACACCATTTGTTTCTGCTCCTCTGAATCCAGTTTCTGATCAAGAACAAGCTTTTCCTCATCTTTATCACTACGCCCAGCTTTTGTCTAGTTCTGAAGCTGATTTCCCTTATCACTCTTCCAATCTTCTTAATCAGAACTATCAGCCCCCACCCTTCAGCGATTCCCCTTCTCAGTTTTCGTCTACTTTGTGGTCATCTTCCCCATTTTCCGATCAGCAACATCCGCCGGAAGAAGACAACGAAGATCAACAATGGAAGTTCAATCCAAGGAATTCAAGCCGCTAA 975 46.36 MWSTSPTGEVDQTSNSGRSVLPHPRLTGLKKQSTKNDISSNSSTVCKCKRYTYTKVLQKLEKVDRKYGKRSLPWEASEEKERENEFQPYSSSSSWPENDMSPMVAALSQVISAGNERPNLVQSAISSVKEEPEPSPTAQDQENSRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEDAALAYDKAALKFKGSKAKLNFPERVPPVSADHPLYQPSATSSSSSSATPFVSAPLNPVSDQEQAFPHLYHYAQLLSSSEADFPYHSSNLLNQNYQPPPFSDSPSQFSSTLWSSSPFSDQQHPPEEDNEDQQWKFNPRNSSR 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1961999 1965435 + BLOR09939 Blo02g00209 56439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00209 324 MobiDBLite consensus disorder prediction 125 139 - -
Blo02g00209 324 Pfam AP2 domain 148 197 IPR001471 GO:0003700|GO:0006355
Blo02g00209 324 SMART rav1_2 148 211 IPR001471 GO:0003700|GO:0006355
Blo02g00209 324 MobiDBLite consensus disorder prediction 29 43 - -
Blo02g00209 324 MobiDBLite consensus disorder prediction 217 240 - -
Blo02g00209 324 MobiDBLite consensus disorder prediction 1 43 - -
Blo02g00209 324 MobiDBLite consensus disorder prediction 125 152 - -
Blo02g00209 324 MobiDBLite consensus disorder prediction 211 240 - -
Blo02g00209 324 MobiDBLite consensus disorder prediction 270 303 - -
Blo02g00209 324 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110 69 315 - -
Blo02g00209 324 PANTHER DNA-BINDING DOMAIN 69 315 IPR044808 GO:0003700|GO:0009873
Blo02g00209 324 CDD AP2 148 206 IPR001471 GO:0003700|GO:0006355
Blo02g00209 324 SUPERFAMILY DNA-binding domain 148 206 IPR016177 GO:0003677
Blo02g00209 324 MobiDBLite consensus disorder prediction 65 100 - -
Blo02g00209 324 MobiDBLite consensus disorder prediction 1 21 - -
Blo02g00209 324 ProSiteProfiles AP2/ERF domain profile. 148 205 IPR001471 GO:0003700|GO:0006355
Blo02g00209 324 MobiDBLite consensus disorder prediction 65 86 - -
Blo02g00209 324 PRINTS Ethylene responsive element binding protein signature 171 187 IPR001471 GO:0003700|GO:0006355
Blo02g00209 324 PRINTS Ethylene responsive element binding protein signature 149 160 IPR001471 GO:0003700|GO:0006355
Blo02g00209 324 MobiDBLite consensus disorder prediction 270 324 - -
Blo02g00209 324 Gene3D AP2/ERF domain 147 207 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00209 Blo-Chr2:1961999 Blo04g00488 Blo-Chr4:4042314 1.19E-29 dispersed
Blo05g00022 Blo-Chr5:207463 Blo02g00209 Blo-Chr2:1961999 4.90E-25 dispersed
Blo17g00139 Blo-Chr17:1294428 Blo02g00209 Blo-Chr2:1961999 4.76E-33 dispersed
Blo04g00975 Blo-Chr4:12294380 Blo02g00209 Blo-Chr2:1961999 6.06E-33 transposed
Blo02g00209 Blo-Chr2:1961999 Blo07g00005 Blo-Chr7:82987 6.37E-100 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11996 PF00847 AP2 9.30E-15 CL0081 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00209 - - gmx:100796624 219.164