Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00229 ATGAAGCTCTTTCTTCCTAGCTCTTCATTTCTACTTCAACATCTGCAGGTGTATAATGTGACCAACTTCTTGGAAGACCATCCGGGCGGCGACGAAGTTCTGTTTTCTGCTACGGGAAAGGATGCAACTGATGATTTTGAAGATGTGGGTCATAGTGACAGTGCAAGAGAAATGATGAGCAAATACTATGTTGGTGAGATAGATTCTTCGACCATTCCAAAAAAAACAACATATATTAATCCAAAACAGCCTCACTACAATCAGGATAGGACATCTGAGTTCATCATCAAGCTCCTCCAATTCCTCGTTCCGCTTGCTATACTGGGATTGGCTGTCGGAGTTCGCTTCTACACAAAATCAAGCTGA 366 42.35 MKLFLPSSSFLLQHLQVYNVTNFLEDHPGGDEVLFSATGKDATDDFEDVGHSDSAREMMSKYYVGEIDSSTIPKKTTYINPKQPHYNQDRTSEFIIKLLQFLVPLAILGLAVGVRFYTKSS 121
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2178838 2179286 - BLOR09959 Blo02g00229 56459

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00229 121 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 13 81 IPR036400 -
Blo02g00229 121 PANTHER CYTOCHROME B5 14 119 - -
Blo02g00229 121 Pfam Cytochrome b5-like Heme/Steroid binding domain 8 67 IPR001199 -
Blo02g00229 121 PRINTS Cytochrome B5 signature 17 27 IPR001199 -
Blo02g00229 121 PRINTS Cytochrome B5 signature 42 49 IPR001199 -
Blo02g00229 121 PRINTS Cytochrome B5 signature 27 41 IPR001199 -
Blo02g00229 121 PRINTS Cytochrome B5 signature 55 67 IPR001199 -
Blo02g00229 121 SMART Cyt_b5_2 6 68 IPR001199 -
Blo02g00229 121 Gene3D - 6 71 IPR036400 -
Blo02g00229 121 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 10 68 IPR001199 -
Blo02g00229 121 PANTHER BNAC04G43300D PROTEIN 14 119 - -
Blo02g00229 121 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 23 30 IPR018506 GO:0020037
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00229 K23490 CYB5; cytochrome b5 - qsu:112039863 198.364
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00229 Blo-Chr2:2178838 Blo09g00007 Blo-Chr9:61155 1.37E-54 dispersed
Blo16g00687 Blo-Chr16:26502338 Blo02g00229 Blo-Chr2:2178838 8.80E-70 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Blo09g00007 . 31 164 NADPH P450 reductases AT5G53560 81.3 2.7e-61 231.5
Blo16g00687 . 1 134 NADPH P450 reductases AT5G53560 69.4 6.0e-53 203.8
Blo02g00229 . 16 121 NADPH P450 reductases AT5G53560 69.8 7.6e-40 160.2
Blo16g00687 . 1 134 NADPH P450 reductases AT5G48810 66.9 2.6e-51 198.4
Blo09g00007 . 31 164 NADPH P450 reductases AT5G48810 62.5 1.8e-47 185.7
Blo07g01073 . 1 138 NADPH P450 reductases AT5G48810 56.7 7.9e-40 160.2
Blo16g00687 . 22 133 NADPH P450 reductases AT2G32720 83.0 3.6e-50 194.5
Blo02g00229 . 16 120 NADPH P450 reductases AT2G32720 84.8 1.7e-47 185.7
Blo09g00007 . 52 163 NADPH P450 reductases AT2G32720 67.9 9.0e-41 163.3
Blo07g01200 . 399 723 NADPH P450 reductases AT5G17770 68.9 1.4e-123 439.5
Blo08g00150 . 8 278 NADPH P450 reductases AT5G17770 76.0 1.8e-120 429.1
Blo09g00346 . 2 251 NADPH P450 reductases AT5G17770 80.0 2.3e-115 412.1
Blo09g00007 . 31 164 NADPH P450 reductases AT5G53560 81.3 2.7e-61 231.5
Blo16g00687 . 1 134 NADPH P450 reductases AT5G53560 69.4 6.0e-53 203.8
Blo02g00229 . 16 121 NADPH P450 reductases AT5G53560 69.8 7.6e-40 160.2
Blo16g00687 . 1 134 NADPH P450 reductases AT5G48810 66.9 2.6e-51 198.4
Blo09g00007 . 31 164 NADPH P450 reductases AT5G48810 62.5 1.8e-47 185.7
Blo07g01073 . 1 138 NADPH P450 reductases AT5G48810 56.7 7.9e-40 160.2
Blo16g00687 . 22 133 NADPH P450 reductases AT2G32720 83.0 3.6e-50 194.5
Blo02g00229 . 16 120 NADPH P450 reductases AT2G32720 84.8 1.7e-47 185.7
Blo09g00007 . 52 163 NADPH P450 reductases AT2G32720 67.9 9.0e-41 163.3
Blo07g01200 . 399 723 NADPH P450 reductases AT5G17770 68.9 1.4e-123 439.5
Blo08g00150 . 8 278 NADPH P450 reductases AT5G17770 76.0 1.8e-120 429.1
Blo09g00346 . 2 251 NADPH P450 reductases AT5G17770 80.0 2.3e-115 412.1
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000252 4 9 3 5 3 5 9 4 4 3 4 4 8 5 5 9 5 6 9 4 5 4 5 5 4 4 4 10 5 2 156