Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo02g00237 ATGGATGTAGGCGGGAGCGGTGGACCTGCTCCGTTTCTGTTGAAGACGTATGACATGGTGGACGACTCAGCGACGGACGAGATTGTGTCGTGGAGCCCGTCGAAGAATAGCTTCGTCGTGTGGAATCCGCCGGAGTTCGCTCGGCTTCTTCTTCCAACTTATTTCAAACACAACAACTTCTCCAGCTTTATTCGGCAGCTCAACACCTATGGTTTTCGAAAGATTGATCCTGAGAAGTGGGAATTTGCCAATGAAGAATTTGTGAAAGATCAGAAACATCTCCTGAAAAATATCCATAGAAGAAAACCTATTCATAGCCACAGTCATCCTCAAGGTTCTTTAGTGGATCCAGAAAGAGCTGATTTTGAGGAAGAAATAGAGAGGCTTTCACGTGAAAAAGCTGTACTTGAGGCAAATTTACTCAAATTAAAACACCATCAGGCTGAGAAGTTTCAGTTAGAAAACATGACCAAGAAAGTTGAAGATATGGAAAAAAGGCAGGAAAATTTGCTGATGTATTTGGAAAAGGCTGTTCAGAATCCTTCCTTTGTCGAACAGCTAGCTCAGAAAGTTGAGTCTATGGACTTCTCATCATACAATAAGAAAAGACGGCTGCCTGAAGTTGATCACATACAGCCAGTCATCAAAAATAACTTTATGGACAATTACAGTTGTTCCCGATATGAGTTGGGGAATATGTTCCAGCAAGATTTCTCGAATAAGCTGAGATTAGAATTATCGCCTACTGTTTCAGATGTTAATTTGGTTTCGTGTAGCACACAGAGTTCAAATGATGAAGGTGGAAGTCCTCAAAGACACACGTCTGAAGAAGAATATAGAAGACCCGCAAGAGCAGAAAGTCTTTATCACACCACGGAGACGTTAGATCTTTCAGATACTGGGACATCATTTACTTTGAACATGGATTTATCTTCACAACGAAATGCATCAAGGAAAGGAAACCCAAAACTACACACCTTGCAGGAAAGTGGAACTTCGATTGAAGATGGTGACAGTAATATTTCATGTCATTTGAATCTTACTCTTGCATCTTCTCCCTTGCAATTCAATACCAGTTCTATTCCAACGAAGATACCCCAACTCAGTTATGAAACTGGTAAATCCCCTGAATCTATTCTCAACTCCAGTAGTAAAGAATTTGCTAATATTTCCTGCAAAAACGGTAACAATGTCGATGAGGAAAGAACGTCTCAAGATCCCCATCGTGACAGTCCAAAGACTCTCCCTCCTCCAGTTAGAGTAAATGATGTTTTCTGGGAACAGTTTCTCACCGAAAGACCTGGCTGTTCAGAAAATGAAGAGGCGAGTTCTAATAATAAGGCAAACTCATATAATGAGCTAGACAGTGGAAGGTCTGGCCATGGAATATATAGAAACACCAAGAACATTGATGAATTATCTCTATGGGGACAGAGCTTGTAA 1443 40.96 MDVGGSGGPAPFLLKTYDMVDDSATDEIVSWSPSKNSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKIDPEKWEFANEEFVKDQKHLLKNIHRRKPIHSHSHPQGSLVDPERADFEEEIERLSREKAVLEANLLKLKHHQAEKFQLENMTKKVEDMEKRQENLLMYLEKAVQNPSFVEQLAQKVESMDFSSYNKKRRLPEVDHIQPVIKNNFMDNYSCSRYELGNMFQQDFSNKLRLELSPTVSDVNLVSCSTQSSNDEGGSPQRHTSEEEYRRPARAESLYHTTETLDLSDTGTSFTLNMDLSSQRNASRKGNPKLHTLQESGTSIEDGDSNISCHLNLTLASSPLQFNTSSIPTKIPQLSYETGKSPESILNSSSKEFANISCKNGNNVDEERTSQDPHRDSPKTLPPPVRVNDVFWEQFLTERPGCSENEEASSNNKANSYNELDSGRSGHGIYRNTKNIDELSLWGQSL 480
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2265149 2267193 + BLOR09967 Blo02g00237 56467

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo02g00237 480 MobiDBLite consensus disorder prediction 435 464 - -
Blo02g00237 480 Gene3D - 7 102 IPR036388 -
Blo02g00237 480 MobiDBLite consensus disorder prediction 391 420 - -
Blo02g00237 480 MobiDBLite consensus disorder prediction 312 335 - -
Blo02g00237 480 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-5 4 471 - -
Blo02g00237 480 SMART hsfneu3 8 101 IPR000232 GO:0003700|GO:0006355|GO:0043565
Blo02g00237 480 ProSitePatterns HSF-type DNA-binding domain signature. 51 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Blo02g00237 480 Pfam HSF-type DNA-binding 12 101 IPR000232 GO:0003700|GO:0006355|GO:0043565
Blo02g00237 480 Coils Coil 119 173 - -
Blo02g00237 480 MobiDBLite consensus disorder prediction 437 456 - -
Blo02g00237 480 SUPERFAMILY Winged helix DNA-binding domain 8 101 IPR036390 -
Blo02g00237 480 MobiDBLite consensus disorder prediction 270 285 - -
Blo02g00237 480 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 4 471 IPR027725 -
Blo02g00237 480 MobiDBLite consensus disorder prediction 258 285 - -
Blo02g00237 480 PRINTS Heat shock factor (HSF) domain signature 12 35 IPR000232 GO:0003700|GO:0006355|GO:0043565
Blo02g00237 480 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Blo02g00237 480 PRINTS Heat shock factor (HSF) domain signature 50 62 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo02g00237 K09419 HSFF; heat shock transcription factor, other eukaryote - qsu:112012397 600.127
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00237 Blo-Chr2:2265149 Blo15g00590 Blo-Chr15:13401581 2.20E-61 dispersed
Blo02g00237 Blo-Chr2:2265149 Blo01g00868 Blo-Chr1:16897425 3.81E-60 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Blo18g00282 . 17 245 HSF AT4G17750 52.1 7.8e-58 221.9
Blo05g00378 . 38 238 HSF AT4G17750 54.2 1.2e-55 214.5
Blo17g00285 . 39 225 HSF AT4G17750 53.7 8.1e-55 211.8
Blo02g00237 . 9 207 HSF AT4G17750 52.7 2.0e-53 207.2
Blo01g01525 . 17 115 HSF AT4G17750 71.7 4.0e-38 156.4
Blo12g00960 BCT,CCT 734 832 HSF AT4G17750 69.7 2.6e-37 153.7
Blo02g01100 . 30 125 HSF AT4G17750 70.8 9.9e-37 151.8
Blo02g00983 . 35 271 HSF AT5G16820 64.7 4.0e-67 252.7
Blo05g00378 . 37 244 HSF AT5G16820 53.5 1.4e-56 217.6
Blo18g00282 . 40 226 HSF AT5G16820 55.8 5.1e-54 209.1
Blo02g00237 . 11 206 HSF AT5G16820 53.1 1.6e-52 204.1
Blo18g00282 . 25 226 HSF AT1G32330 52.2 6.0e-55 212.2
Blo02g00237 . 3 189 HSF AT1G32330 50.7 3.2e-48 189.9
Blo01g01525 . 15 114 HSF AT1G32330 70.0 2.0e-37 154.1
Blo12g00960 BCT,CCT 732 831 HSF AT1G32330 68.0 1.3e-36 151.4
Blo18g00282 . 40 228 HSF AT3G02990 55.4 1.2e-55 214.5
Blo02g00237 . 11 209 HSF AT3G02990 52.9 5.5e-53 205.7
Blo01g01525 . 5 130 HSF AT3G02990 58.9 2.5e-37 153.7
Blo17g00285 . 30 246 HSF AT2G26150 58.3 3.9e-72 268.9
Blo11g00264 BCT 7 382 HSF AT4G18880 50.6 3.1e-89 325.9
Blo01g01525 . 14 129 HSF AT4G18880 62.1 1.8e-36 150.6
Blo02g00237 . 5 475 HSF AT4G13980 55.1 1.5e-127 453.4
Blo18g00282 . 26 254 HSF AT3G22830 56.0 4.4e-67 252.3
Blo17g00285 . 30 232 HSF AT3G22830 53.3 9.0e-60 228.0
Blo05g00378 . 26 314 HSF AT3G51910 51.6 4.2e-69 258.5
Blo16g00980 BCT 167 373 HSF AT5G54070 51.0 1.4e-50 197.2
Blo15g00160 . 14 120 HSF AT4G36990 63.6 4.0e-38 155.6
Blo12g00576 . 13 112 HSF AT4G36990 65.0 1.7e-36 150.2
Blo02g01100 . 26 326 HSF AT4G11660 52.3 7.2e-80 294.7
Blo01g01525 . 13 116 HSF AT4G11660 75.0 1.7e-44 177.2
Blo12g00960 BCT,CCT 730 833 HSF AT4G11660 71.2 1.6e-42 170.6
Blo12g00576 . 13 111 HSF AT4G11660 70.7 4.0e-38 156.0
Blo12g00576 . 18 212 HSF AT2G41690 54.6 4.9e-45 178.3
Blo01g01525 . 16 340 HSF AT1G46264 56.8 3.8e-91 332.0
Blo12g00960 BCT,CCT 733 1057 HSF AT1G46264 54.6 2.3e-88 322.8
Blo15g00160 . 17 115 HSF AT1G46264 72.7 4.7e-41 165.6
Blo12g00576 . 15 112 HSF AT1G46264 69.4 2.8e-38 156.4
Blo02g00237 . 5 102 HSF AT1G46264 70.4 8.3e-38 154.8
Blo05g00378 . 20 140 HSF AT1G46264 61.2 1.2e-36 151.0
Blo16g01032 . 6 179 HSF AT3G24520 64.4 3.6e-59 225.7
Blo01g00509 CCT 1 163 HSF AT3G24520 69.9 3.7e-56 215.7
Blo08g00287 CCT 6 175 HSF AT3G24520 57.1 8.1e-51 198.0
Blo18g00282 . 17 245 HSF AT4G17750 52.1 7.8e-58 221.9
Blo05g00378 . 38 238 HSF AT4G17750 54.2 1.2e-55 214.5
Blo17g00285 . 39 225 HSF AT4G17750 53.7 8.1e-55 211.8
Blo02g00237 . 9 207 HSF AT4G17750 52.7 2.0e-53 207.2
Blo01g01525 . 17 115 HSF AT4G17750 71.7 4.0e-38 156.4
Blo12g00960 BCT,CCT 734 832 HSF AT4G17750 69.7 2.6e-37 153.7
Blo02g01100 . 30 125 HSF AT4G17750 70.8 9.9e-37 151.8
Blo02g00983 . 35 271 HSF AT5G16820 64.7 4.0e-67 252.7
Blo05g00378 . 37 244 HSF AT5G16820 53.5 1.4e-56 217.6
Blo18g00282 . 40 226 HSF AT5G16820 55.8 5.1e-54 209.1
Blo02g00237 . 11 206 HSF AT5G16820 53.1 1.6e-52 204.1
Blo18g00282 . 25 226 HSF AT1G32330 52.2 6.0e-55 212.2
Blo02g00237 . 3 189 HSF AT1G32330 50.7 3.2e-48 189.9
Blo01g01525 . 15 114 HSF AT1G32330 70.0 2.0e-37 154.1
Blo12g00960 BCT,CCT 732 831 HSF AT1G32330 68.0 1.3e-36 151.4
Blo18g00282 . 40 228 HSF AT3G02990 55.4 1.2e-55 214.5
Blo02g00237 . 11 209 HSF AT3G02990 52.9 5.5e-53 205.7
Blo01g01525 . 5 130 HSF AT3G02990 58.9 2.5e-37 153.7
Blo17g00285 . 30 246 HSF AT2G26150 58.3 3.9e-72 268.9
Blo11g00264 BCT 7 382 HSF AT4G18880 50.6 3.1e-89 325.9
Blo01g01525 . 14 129 HSF AT4G18880 62.1 1.8e-36 150.6
Blo02g00237 . 5 475 HSF AT4G13980 55.1 1.5e-127 453.4
Blo18g00282 . 26 254 HSF AT3G22830 56.0 4.4e-67 252.3
Blo17g00285 . 30 232 HSF AT3G22830 53.3 9.0e-60 228.0
Blo05g00378 . 26 314 HSF AT3G51910 51.6 4.2e-69 258.5
Blo16g00980 BCT 167 373 HSF AT5G54070 51.0 1.4e-50 197.2
Blo15g00160 . 14 120 HSF AT4G36990 63.6 4.0e-38 155.6
Blo12g00576 . 13 112 HSF AT4G36990 65.0 1.7e-36 150.2
Blo02g01100 . 26 326 HSF AT4G11660 52.3 7.2e-80 294.7
Blo01g01525 . 13 116 HSF AT4G11660 75.0 1.7e-44 177.2
Blo12g00960 BCT,CCT 730 833 HSF AT4G11660 71.2 1.6e-42 170.6
Blo12g00576 . 13 111 HSF AT4G11660 70.7 4.0e-38 156.0
Blo12g00576 . 18 212 HSF AT2G41690 54.6 4.9e-45 178.3
Blo01g01525 . 16 340 HSF AT1G46264 56.8 3.8e-91 332.0
Blo12g00960 BCT,CCT 733 1057 HSF AT1G46264 54.6 2.3e-88 322.8
Blo15g00160 . 17 115 HSF AT1G46264 72.7 4.7e-41 165.6
Blo12g00576 . 15 112 HSF AT1G46264 69.4 2.8e-38 156.4
Blo02g00237 . 5 102 HSF AT1G46264 70.4 8.3e-38 154.8
Blo05g00378 . 20 140 HSF AT1G46264 61.2 1.2e-36 151.0
Blo16g01032 . 6 179 HSF AT3G24520 64.4 3.6e-59 225.7
Blo01g00509 CCT 1 163 HSF AT3G24520 69.9 3.7e-56 215.7
Blo08g00287 CCT 6 175 HSF AT3G24520 57.1 8.1e-51 198.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009917 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 1 1 0 33
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
12000 PF00447 HSF_DNA-bind 1.30E-31 CL0123 Blo TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo02g00237 Blo_Chr02 FPKM 286.716064 313.571869 129.145859 144.419373 147.198334 157.97052 145.208374 161.03241 183.269531 169.224518